bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggnogv4.proteins.all.fa
           14,875,530 sequences; 5,112,597,290 total letters





Query= Contig-22_CDS_annotation_glimmer3.pl_2_2

Length=561
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  575615.HMPREF0670_00477                                             72.4    9e-11


> 575615.HMPREF0670_00477
Length=541

 Score = 72.4 bits (176),  Expect = 9e-11, Method: Compositional matrix adjust.
 Identities = 110/518 (21%), Positives = 198/518 (38%), Gaps = 114/518 (22%)

Query  11   QIPEMKASR-----TRFNRDQTILTTFDSGKLIPFYVDEVLPGDTFSVDTSAIIRMTTPK  65
            ++P++K SR     + F+  Q  L T  +G L+P    +++  D   +     +R     
Sbjct  5    KVPQIKPSRANRPRSAFDLSQKHLYTAPAGALLPVLSVDLMFHDHIRIQAQDFMRTM---  61

Query  66   YPVMDDAFID----FYYFYCPNRILWDNFKQFM-------GEVEETPWMPKQEYSVPKIV  114
             P+   AFI     + +F+ P   LW  + QF+         V  +    K   SVP + 
Sbjct  62   -PMNSAAFISMRGVYEFFFVPYSQLWHPYDQFITSMNDYRSSVVSSAAGDKALDSVPNVK  120

Query  115  I----------NGKEKSPEPYEDS---ILDYMG---------IPTKVKKVFKVNALPIRA  152
            +            K+    P+ ++   ++D +G          P  +     VN   + A
Sbjct  121  LADMYKFVRERTDKDIFGYPHSNNSCRLMDLLGYGKPITSSKTPVPLLYTGNVNLFRLLA  180

Query  153  YVKIWNEFFRDENVDNAATIKTDDASIDYQDGNESEDNTDDILKKAIGGGRCLPVNKFHD  212
            Y KI+++++R+   +    +     +ID++ G      T D  KK +             
Sbjct  181  YNKIYSDYYRNTTYEG---VDVYSFNIDHKKGTFVP--TADEFKKYLN------------  223

Query  213  YFTSCLPYPQRGPEVTLPMQGNAPVGMYKNDSLTEFGTINGNSEIFLNQALNGSALAPKI  272
                 L Y             NAP+  Y N   T   TI                     
Sbjct  224  -----LHYR------------NAPLDFYTNLRPTPLFTIG--------------------  246

Query  273  SNSFKEGARRALVTGSTNPTTQVSDAAYLAANLGETTATTVNDLRKAVAVQQYYEALARG  332
            S+SF    + +  TGS   +   +D      N+       V+ +R A A+ +      R 
Sbjct  247  SDSFSSVLQLSDPTGSAGFS---ADGNSAKLNMASPDVLNVSAIRSAFALDKLLSISMRA  303

Query  333  GSRYREQVQALWDVVISDKTVQIPEYLGGGRYHVNMNQIVQTSGQQSSTDTPIGE-----  387
            G  Y EQ++A + V +S+       YLGG   +V +  + QTSG  +   + +G      
Sbjct  304  GKTYAEQIEAHFGVTVSEGRDGQVYYLGGFDSNVQVGDVTQTSGTTNPNVSEVGNAKLAG  363

Query  388  -----TGAMSVTPVNESSFTKSFEEHGFIIGVCCVRHNHSYQ-QGLERLWSRTDRLDYYV  441
                 TG  + +   E  F    +E G ++ +  V     Y    L+   ++  R DY++
Sbjct  364  YLGKITGKGTGSGYGEIQFDA--KEPGVLMCIYSVVPAMQYDCMRLDPFVAKQTRGDYFI  421

Query  442  PQFANLGEQPVKKKEIMLTGEASDEETFGYQEAWADYR  479
            P+F NLG QP+    + L    + + ++G+Q  +++Y+
Sbjct  422  PEFENLGMQPIVPAFVSL--NRAKDNSYGWQPRYSEYK  457



Lambda      K        H        a         alpha
   0.316    0.133    0.397    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 1229548503040