bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggnogv4.proteins.all.fa
           14,875,530 sequences; 5,112,597,290 total letters





Query= Contig-2_CDS_annotation_glimmer3.pl_2_8

Length=342
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  469590.BSCG_01609                                                     233   5e-68


> 469590.BSCG_01609
Length=580

 Score =   233 bits (594),  Expect = 5e-68, Method: Compositional matrix adjust.
 Identities = 137/346 (40%), Positives = 193/346 (56%), Gaps = 32/346 (9%)

Query  2    GVLPNSQFGDIAVIDIEGGLNIPASRISLSSNNRPTIGIKVGAQVSSPNNCSITNSSGNL  61
            GVLP  Q+GD A +++     + A  +  + +  P  G       S+  N    N SG  
Sbjct  262  GVLPRQQYGDTAAVNVNLSNVLSAQYMVQTPDGDPVGGSPFS---STGVNLQTVNGSG--  316

Query  62   STGDILSVGIPAASYKLQSSFNVLALRQAESLQKYREITQSVDTNYRDQIKAHFGVNVPA  121
                               +F VLALRQAE LQK++EITQS + +Y+DQI+ H+ V+V  
Sbjct  317  -------------------TFTVLALRQAEFLQKWKEITQSGNKDYKDQIEKHWNVSVGE  357

Query  122  SDSHMAQYIGGIARNLDISEVVNNNLQGDGEAVIYGKGVGTGTGSMRYTTGSKYCILMCI  181
            + S M+ Y+GG   +LDI+EVVNNN+ G   A I GKGV  G G + +  G +Y ++MCI
Sbjct  358  AYSEMSLYLGGTTASLDINEVVNNNITGSNAADIAGKGVVVGNGRISFDAGERYGLIMCI  417

Query  182  YHCMPVLDYDISGQHPQLLATSVDELPIPEFDNIGMEGVPLVQLVNSNLYKTNKSVKIDS  241
            YH +P+LDY     +P     +  +  IPEFD +GME VPLV L+N      N      S
Sbjct  418  YHSLPLLDYTTDLVNPAFTKINSTDFAIPEFDRVGMESVPLVSLMNPLQSSYNVG---SS  474

Query  242  ILGYNPRYYAWKSNIDRIHGAFTTTLQDWVSPVDDSFL-----YSTFGTPSSGSFVTWPF  296
            ILGY PRY ++K+++D   GAF TTL+ WV   D+  +     Y      S G+ V +  
Sbjct  475  ILGYAPRYISYKTDVDSSVGAFKTTLKSWVMSYDNQSVINQLNYQDDPNNSPGTLVNYTN  534

Query  297  FKVNPNTLDNIFAVKSDSTWESDQFLVNSYVGCKVVRPLSRDGVPY  342
            FKVNPN +D +FAV + ++ ++DQFL +S+   KVVR L  DG+PY
Sbjct  535  FKVNPNCVDPLFAVAASNSIDTDQFLCSSFFDVKVVRNLDTDGLPY  580



Lambda      K        H        a         alpha
   0.316    0.134    0.399    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 612064664180