bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggnogv4.proteins.all.fa
           14,875,530 sequences; 5,112,597,290 total letters





Query= Contig-36_CDS_annotation_glimmer3.pl_2_3

Length=318
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  888743.HMPREF9141_0984                                              50.4    2e-04


> 888743.HMPREF9141_0984
Length=479

 Score = 50.4 bits (119),  Expect = 2e-04, Method: Compositional matrix adjust.
 Identities = 56/245 (23%), Positives = 87/245 (36%), Gaps = 78/245 (32%)

Query  7    GVFDMCLYPKLIRNKRYLPNKKNGGNVPYCDDKRKKAVAIGCGKCIECRKKRANEWRVRL  66
            G  + CL PK I NK             Y D+     + + C KC  CR   A++W  R+
Sbjct  5    GNINSCLSPKRIYNK-------------YIDE----TLYVPCRKCFRCRDSYASDWSRRI  47

Query  67   MIELKDHPENAHFVTMTYSDESLSKFEQEEALSVASRSIELFRKR---------------  111
              E ++H   + FVT+TY +E +  F Q   +   S  +  F  R               
Sbjct  48   ENECREH-RFSLFVTLTYDNEHIPLF-QPLVMDDGSHPV-WFSNRLSESGKFLSDSVCRS  104

Query  112  ----------------------WYKRYKCGIKH-------------FLICELGGNDSQRM  136
                                  W+KR +  + +             + IC   G  + R 
Sbjct  105  LPPQKMEDEVCFAYPCKKDVQDWFKRLRSAVDYQLNKNKSNEFRIRYFICSEYGPRTFRP  164

Query  137  HLHGILWTEKSKEE------VEEVWGYGFVDYGEFVNEKTVNYIVKYIFKVDEKHPDFVT  190
            H H ILW +  + +      + E W  G   +   VN     Y+ KY+   D + P F+ 
Sbjct  165  HYHAILWYDSEELQRNIGRLIRETWKNGNSVFS-LVNNSASQYVAKYV-NGDTRLPPFLR  222

Query  191  KVWTS  195
              +TS
Sbjct  223  TEFTS  227



Lambda      K        H        a         alpha
   0.320    0.138    0.429    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 545036852980