bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggnogv4.proteins.all.fa
           14,875,530 sequences; 5,112,597,290 total letters



Query= Contig-3_CDS_annotation_glimmer3.pl_2_1

Length=233
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  483216.BACEGG_02721                                                   146   1e-37


> 483216.BACEGG_02721
Length=578

 Score =   146 bits (368),  Expect = 1e-37, Method: Compositional matrix adjust.
 Identities = 91/238 (38%), Positives = 126/238 (53%), Gaps = 35/238 (15%)

Query  1    MAHFTGLKELQNRPHKSGHDISAKNCFTAKVGELLPVWTDFAIPNCTYRINLEYFTRTRP  60
            MA+   LK ++N+P ++G D+S K  FTAK GELLPV     +P  T++INL+ FTRT+P
Sbjct  1    MANIMSLKSIRNKPSRNGFDLSFKKNFTAKAGELLPVMVKEVLPGDTFKINLKAFTRTQP  60

Query  61   VQTSAYTRIREYFDFFAVPCDLIWKSFDSAVIQMGEKAP-IQSKDLLTNLTVKGDLPYCS  119
            V T+A+ RIREY+DFF VP DL+W   ++ + QM +      S D   N  + G++PY +
Sbjct  61   VNTAAFARIREYYDFFFVPYDLLWNKANTVLTQMYDNPQHAVSIDPTRNFVLSGEMPYMT  120

Query  120  LSDLSFALKFASGNPASLGNKVSVSPGFG----NIFGYNRGDVNHKLLSMLDYGNVVDKS  175
               +           AS  N +S +        N FGYNR   + KLL  L YGN     
Sbjct  121  SEAI-----------ASYINALSTASALADYKSNYFGYNRSKSSVKLLEYLGYGNY----  165

Query  176  ANWIGTNANRWWNRRVATADSAVYSQKYNVNLAVNLFFLATYQKIYQDFFRWSQWEKC  233
             +++  +    WN     A           NL  N+F L  YQKIY DF+R SQWE+ 
Sbjct  166  ESFLTDD----WNTAPLMA-----------NLNHNIFGLLAYQKIYSDFYRDSQWERV  208



Lambda      K        H        a         alpha
   0.322    0.135    0.433    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 304231272520