bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggnogv4.proteins.all.fa
           14,875,530 sequences; 5,112,597,290 total letters





Query= Contig-3_CDS_annotation_glimmer3.pl_2_8

Length=354
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  469590.BSCG_01609                                                     225   7e-65


> 469590.BSCG_01609
Length=580

 Score =   225 bits (573),  Expect = 7e-65, Method: Compositional matrix adjust.
 Identities = 146/357 (41%), Positives = 199/357 (56%), Gaps = 42/357 (12%)

Query  2    GILPNSQFGDLAVVDLGTISASGSKIPVGAYDGVNDSGTFKQFQTSSESYNGSSDKTTQI  61
            G+LP  Q+GD A V++   +   ++  V   DG              +   GS   +T +
Sbjct  262  GVLPRQQYGDTAAVNVNLSNVLSAQYMVQTPDG--------------DPVGGSPFSSTGV  307

Query  62   YPRNPDSISVRADSNLWAVLGESSDLKLKFSVLALRQAEALQKWKEITQSVDTNYRDQIK  121
                          NL  V G  +     F+VLALRQAE LQKWKEITQS + +Y+DQI+
Sbjct  308  --------------NLQTVNGSGT-----FTVLALRQAEFLQKWKEITQSGNKDYKDQIE  348

Query  122  AHFGVSVPQSEAHMAKYIGGVARNLDISEVVNNFLPGPGNDSSQAYIYGKGVGSGQGSMT  181
             H+ VSV ++ + M+ Y+GG   +LDI+EVVNN + G    S+ A I GKGV  G G ++
Sbjct  349  KHWNVSVGEAYSEMSLYLGGTTASLDINEVVNNNITG----SNAADIAGKGVVVGNGRIS  404

Query  182  FNTGSGYYILMCIYHAVPLLDYSISGPDGQNLVTSVEDLPIPEFDNIGMESVPAVELMNS  241
            F+ G  Y ++MCIYH++PLLDY+    +      +  D  IPEFD +GMESVP V LMN 
Sbjct  405  FDAGERYGLIMCIYHSLPLLDYTTDLVNPAFTKINSTDFAIPEFDRVGMESVPLVSLMN-  463

Query  242  SLYSNVNSADKILGYSPRYYNWKTKIDRIHGAFTTTLKDWVAPIDD-SFLYSL-FGDSLS  299
             L S+ N    ILGY+PRY ++KT +D   GAF TTLK WV   D+ S +  L + D  +
Sbjct  464  PLQSSYNVGSSILGYAPRYISYKTDVDSSVGAFKTTLKSWVMSYDNQSVINQLNYQDDPN  523

Query  300  TYKG--VTWPFFKVNPNTLDDLFAVKVDSTWETDQLLVNCNVGCYVTRPLSADGVPY  354
               G  V +  FKVNPN +D LFAV   ++ +TDQ L +      V R L  DG+PY
Sbjct  524  NSPGTLVNYTNFKVNPNCVDPLFAVAASNSIDTDQFLCSSFFDVKVVRNLDTDGLPY  580



Lambda      K        H        a         alpha
   0.315    0.134    0.398    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 648424941260