bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggnogv4.proteins.all.fa
           14,875,530 sequences; 5,112,597,290 total letters





Query= Contig-8_CDS_annotation_glimmer3.pl_2_7

Length=322
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  420889.LCGT_0019                                                    38.1    1.8


> 420889.LCGT_0019
Length=280

 Score = 38.1 bits (87),  Expect = 1.8, Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 60/143 (42%), Gaps = 46/143 (32%)

Query  5    LHSSFGYFTTLTISPEGIK----EIEEKTGLKWEENPNEIATKGLRLFLERVRKETGKSI  60
            L + F YF TLTI P+       EI ++T LKW                 R +++T    
Sbjct  71   LANDFKYFVTLTIDPKKRDSLDYEIAKQTLLKW----------------CRAQRKTKGKF  114

Query  61   KHWCVTELGEKKDRIHLHGIFFGQ--------------KSAELIRKH---------WKYG  97
             +  V E   K  R+H HG+  GQ              K+ E++ +H         W+YG
Sbjct  115  DYIFVPEF-HKSGRVHFHGV-IGQPEYRSFTLTEATNPKTGEILIRHNRQVLELKEWRYG  172

Query  98   FVFIGGYCN-SRSVNYITKYMLK  119
            F  +    +  R+ +Y+TKY+ K
Sbjct  173  FTDVTPIEDKERTSSYMTKYISK  195



Lambda      K        H        a         alpha
   0.318    0.135    0.416    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 557216447460