FEATURES             Location/Qualifiers
     gene            complement(422..592)
                     /locus_tag="Alpa_01"
     CDS             complement(422..592)
                     /product="unnamed protein product"
                     /protein_id="gnl|USP|Alpa_01"
                     /translation="VIVYTDIQSVRVLHYAVSTDYVEDFTQMIKDTFVHPDISFTDIIYSSDSRQFFQLI"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:INSD:CDL65705.1"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(635..805)
                     /locus_tag="Alpa_02"
     CDS             complement(635..805)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_02"
                     /translation="MKRKEVNICISEIRNLLRSIDRSFVPNHVYDKSSLVYRNAADIRYIADILCKSLTH"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(1691..2800)
                     /locus_tag="Alpa_03"
     CDS             complement(1691..2800)
                     /product="unnamed protein product"
                     /protein_id="gnl|USP|Alpa_03"
                     /translation="MASKFDPLSLLSPGISAIGSIVGGLFGKKGSDNAAKAQLQIARETNANNYRIAQENNAFNERMVDKMNDWNSAKNQRARLEEAGLNPYLMLDGGSAGTATTAPTADTSSVQSAPDVGSTIASGAQQLGSSISSAASQISQQVYNSSLQEANVRKANADASSSEQDALLKGIESQFAAQRFLLDLKLKEMQGKVSEQDYYYLRDSMQDRLDSVKFQNTLTGSQSSYYNQMAGLVDVQRQIEKTNLDWLPREKQAGLAATLQNVRTMVSQMHLNYAQAKNAYAMAALNYAQEAGVRLNNKLQDSIFDLSVGMAENQYEQGRADAAQHIFGFNLPSANAFVYSQAGNVRQVFNKKERTPMRTPHRRARKPKQ"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:hypothetical.protein.BACPLE"
                     /inference="similar to AA sequence:INSD:CDL65706.1"
                     /inference="similar to AA sequence:INSD:WP_007368519.1"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(2857..3291)
                     /locus_tag="Alpa_04"
     CDS             complement(2857..3291)
                     /product="unnamed protein product"
                     /protein_id="gnl|USP|Alpa_04"
                     /translation="MFDNEFLSYIPPIGEDLQHTKVSDDCTKLHSDIYLLHHIGDLNISNNLADAIKSRLQSVSDFMPDDLRQSFDKLDDFQKMEVTDSRYAQWVSDKVSRTKQFMKEYDTALSKLKDSEETEKLKVAQKNLRDFILRLGSAEESDNS"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:INSD:CDL65707.1"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(3304..5175)
                     /locus_tag="Alpa_05"
     CDS             complement(3304..5175)
                     /product="unnamed protein product"
                     /protein_id="gnl|USP|Alpa_05"
                     /translation="MANRSNIMGLHGLKNKTSRNSFDLSHRNLFTAKVGELLPCFVQEVNPGDSIKLDSSYFTRTAPLQTAAFTRLRENVQYFFVPYQCLWKYFEGQVKNMTKNANGGDISQIATSPFANAKVSTEMPFISYTALHAYLNKLLNYVDSSANPTELSNPFLYNNGCWRHAESAKLLQLLGYGNFVQQFKNFSASKPYSLLHVENAPALSVFRLLAYQKICNDFYTYRQWQPYNASLCNIDYITPDSSSSMDLSSKFSSISVSDLGKSNMLDMRFSNLPLDYFNGVLPTPQFGSESVVSLSQNADVYTGFDKSQWQTLDGSAFPSGSVSSSNSDRSLTANGKSIEHVHILPSGSITSSLSIAALRQATALQKYKEIQLANDPDFESQIEAHFGIKPKHDMHKSRFIGGSSSMIDINPVVNQNLGAGQNQDNQAVTKAAPTGQGGASFKFTADTFGVVIGIYRCTPVLDYSHVGIDRTLLKTDASDFVIPELDSIGMQQTFQCELFAPTSQMTASAPDKRKYDMSRTFGYAPRYSEYKVSFDRYNGAFCDTLKSWVTGFNTHIFDSDRWNDRSYFSISVPQLFVCRPDIVKDIFALQTYHDSNDDNLYVGMVNMCYATRNLSRYGLPYSN"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP1"
                     /inference="similar to AA sequence:INSD:CDL65708.1"
                     /inference="similar to AA sequence:INSD:WP_004291032.1"
                     /db_xref="InterPro:IPR003514"
                     /db_xref="InterPro:IPR016184"
                     /GO_component="GO:0019028 - viral capsid"
                     /GO_function="GO:0005198 - structural molecule activity"
                     /db_xref="eggNOG:bacteNOG05989"
                     /db_xref="eggNOG:bactNOG180503"
                     /db_xref="eggNOG:bctoNOG21249"
                     /db_xref="eggNOG:NOG133500"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(5178..5942)
                     /locus_tag="Alpa_06"
     CDS             complement(5178..5942)
                     /product="unnamed protein product"
                     /protein_id="gnl|USP|Alpa_06"
                     /translation="LSALSRPHSLHSRFFGQTLAEEEIQRAIVSQDFEYFRVHYRYSSKGYQIPYALWRSYYSRFFPVFTGLVNMSNEKIFRLFEYWEEIGKLSGYYRVSNQVQWLKNWYYYYYSRPLETIPSPIADVLLNLQSTFDLSEHCLHPEDFSALHDVLYASKRFCWLCSWLNMSHKQYFEIWSNFYKYINLSLYKEHYLALENDSKYFRGWFDRRFITPTAVLEFPLADSDFTNFVENSVSTHDSLIKHREIGDRYKHIYQ"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:INSD:CDL65709.1"
                     /note="1 probable transmembrane helix predicted by TMHMM"
ORIGIN
        1 acggacagct ggaatattaa aatcattgta agtagggtta atgaaataac aatacttagc 
       61 gtgactttct tccaaagcca acatggtaga aagtgacttt tgtcgagaga cctgacaaca 
      121 ctcacactta cggcaaggat ataaaaaaat agaagaacct ctatgaatag caataggaga 
      181 cgtgcactta ataaagggta ataagtttgc cattaatacc gatatttgaa attacgaaaa 
      241 aaatcactag agtgctcaac tgtcgtggta tcctgaataa ggatagttgt cttgccgtgg 
      301 cactcaacgg cacggctaga cgtacacgaa gttaaggcag aaatgccaaa gacagaacca 
      361 atcaaaccta aggcataaat caaaacctta ataataatct ttaatacttc tttattcata 
      421 tctatataag ttgaaaaaat tgacgtgaat cggaagaata gataatatcc gtaaaggata 
      481 tatcagggtg aacaaatgta tctttaatca tctgggtaaa atcctcaaca taatcggtag 
      541 aaaccgcata atgaagaaca cggacagatt gaatatcggt gtagacaatc acacatcgaa 
      601 gatactgacg gaaacaaact ttctttttca taagctaatg agttaaagac ttacaaagaa 
      661 tatcagctat atagcgaata tcggcagcat ttcgatacac caaagaactc ttatcatata 
      721 catgattagg tacaaaagac ctatcaatag accgtaaaag attacgaatc tcagaaatac 
      781 aaatatttac ctctttccgt ttcataagcc aaaaatttta tttttacatt aaactaatca 
      841 atcagaaaca ttaagtaact gataacgagc gcaaagataa acacatttat ttataaccgg 
      901 tattatggta acgaatttta tattactttc acaatgtttc acgtgaaatg taaactctag 
      961 attgcatatt agcacaaaag tgcgtaaact accacaacac caaattatgg ttgtgtcact 
     1021 tttgctataa atgaacaaga gggaggagaa gtcggggaaa gtaacccgac tttgcatatt 
     1081 tttcgtgctt cgcacgcttc acttgcttga gtgttcgacc aacggaaatg tgaaaaagaa 
     1141 cataattttg acgtttgaaa agctccttcg tcgcaattca aacgacaaaa ttattgtcct 
     1201 ttttctgctt cgccgaacgc acaacataat aaacgttacg acatggaaaa tttgcctacg 
     1261 cagaattttc taatgtcata acgtctatta tgttgcgctc agagaactaa cgataactgg 
     1321 cgattagggc tttcagccct ataacctgag ttccgcctag cgcgcggaac cgagcgcgtt 
     1381 tacgctccgc gggctctacc gagggtgttc ttttggcatt gcccaaaaga accaaaaggc 
     1441 tagtgttttt cataagtatt gaagcctgac ggattgagtt taagtggctg ggttgtcgtt 
     1501 tccttcatcg gaaactcgca catgtataca aaataaatgc gcgcgtacgt taaatcgcac 
     1561 acgcgcaaat attaagagat agaaacgcaa tagattgtaa ataacaatcc aactaacaaa 
     1621 aaggctagaa ataagcctat acaatataaa ataaatctat ccatatctat aaaacgtaaa 
     1681 tataaacaaa ttattgttta ggtttacgtg ctcttctatg aggtgtacgc ataggagtac 
     1741 gttctttttt attaaaaact tgtctaacat tacctgcttg actataaaca aaagcattag 
     1801 cagaaggaag attaaaacca aaaatatgtt gagcagcgtc tgcacgacct tgctcatact 
     1861 gattttcagc cataccaaca gacaaatcaa aaatggaatc ttgcaactta ttattgagac 
     1921 gaactccagc ttcctgagca taattaagcg cagccatagc ataagcattt ttagcttgag 
     1981 cataattcaa atgcatctgg gaaaccatag tacgaacatt ctgcaaagta gcagcaagac 
     2041 cggcttgttt ttcacgaggt aaccaatcca aattggtttt ctcaatctga cgttgaacat 
     2101 caacgagacc agccatttga ttatagtagg aagactgaga accagtaaga gtattctgaa 
     2161 acttgacaga atcaagccta tcttgcatac tatcacgcaa ataataataa tcttgctcag 
     2221 atacttttcc ttgcatctcc tttagtttaa ggtcaagcaa aaaacgctga gcagcaaact 
     2281 gggattctat acctttaagc aaagcatcct gttcactaga tgaagcatca gcattagcct 
     2341 tacgaacatt agcttcctga agggaagagt tgtaaacttg ctgagaaatc tgagacgcag 
     2401 cagaagaaat agaactacct aactgttggg ctcctgatgc aatggtacta ccaacatcag 
     2461 gagcagactg aacagatgaa gtatcggcag ttggagcagt agtagcagta ccagcagaac 
     2521 caccatctaa catcagataa gggtttaaac cggcttcctc caatcgagca cgctgattct 
     2581 tagcagagtt ccaatcattc attttatcaa ccatacgttc gttgaaagcg ttgttttcct 
     2641 gagcaatacg ataattattg gcattagttt cacgagcaat ctgcaattgg gccttagcag 
     2701 cattatcaga acctttttta ccaaacaaac cgccaactat agaaccaata gcggaaatgc 
     2761 caggactaag gagagataga gggtcaaatt tactagccat aacacaaaat aattaaaaag 
     2821 ccctaacacc gacatgttag ggcaaaagat atataattag gagttgtcgg actcctcagc 
     2881 agaaccaaga cgcagaataa aatcacgcaa attcttctgg gcaactttaa gcttttcagt 
     2941 ttcctcagaa tctttcaact tagaaagagc agtatcatat tctttcatga actgcttagt 
     3001 acgagaaacc ttatcagaaa cccattgagc ataacgggaa tcggtaacct ccattttttg 
     3061 gaaatcgtcg agtttatcga aactttgacg caaatcatct ggcataaaat cagaaacaga 
     3121 ctgcaaacga gacttaattg catcagcaag attattagag atatttaaat caccaatatg 
     3181 atgcagcaaa taaatatctg aatgtaactt agtgcagtca tcagaaactt tagtgtgctg 
     3241 caagtcctca ccaatgggag gaatatagct taaaaattca ttatcaaaca taatacacaa 
     3301 attttaatta gaataaggca atccataacg agacaaattg cgagtagcat aacacatatt 
     3361 taccatacca acgtataaat tatcgtcatt ggaatcatga taagtctgaa gcgcgaaaat 
     3421 atccttgaca atatcaggac ggcaaacaaa aagctgaggt acactaatac taaaataact 
     3481 cctatcgttc caacgatcac tatcaaaaat atgagtatta aagccagtaa cccaagattt 
     3541 caaagtatca caaaaagcac cgttatatct atcaaatgaa actttatact cagaataacg 
     3601 aggagcgtaa ccaaaagtac gagacatatc atatttgcgc ttatcaggag cagaagcagt 
     3661 catctgagaa gttggagcaa aaagttcaca ctgaaaagtc tgctgcatgc cgatagagtc 
     3721 gagctcagga ataacaaaat cagacgcatc agtttttaaa agagttcggt ctatacctac 
     3781 atgagaataa tcaagaacag gagtacatct gtaaatgcca ataacaacac caaaagtatc 
     3841 agcagtaaac ttaaaacttg caccaccttg accagtagga gcagctttag ttacagcttg 
     3901 gttatcctga ttttgaccag cgccgagatt ttgattaaca actgggttaa tatcaatcat 
     3961 actagatgag ccaccgataa aacgagactt atgcatatcg tgctttggct taataccaaa 
     4021 atgagcttcg atttgagatt caaaatcagg gtcgttagca agctgaattt ctttatactt 
     4081 ctgtaaagca gtagcttgac gcaaagcagc aatagacaaa gaagaagtaa tagaaccaga 
     4141 aggaagaata tgaacatgct caatagattt accattagca gtcaaggagc ggtcactatt 
     4201 agaactagaa acagaaccgg aaggaaaagc acttccatct agagtttgcc attgagattt 
     4261 gtcaaaacca gtataaacat ctgcattttg agataaagaa acaacactct cagaaccaaa 
     4321 ctgaggtgta ggtaaaacgc cgttaaaata atcaagaggc aagttactaa aacgcatatc 
     4381 aagcatatta gacttaccta aatcagaaac agaaatggaa gagaacttcg agcttaaatc 
     4441 catagaggac gaagaatcag gcgtaatata atctatatta cacaaagaag cattataagg 
     4501 ttgccactga cgataagtat aaaaatcatt acaaatcttc tggtaagcaa ggagacgaaa 
     4561 aacagacaaa gcaggggcat tctctacatg aagtaaagaa tatggtttac tagcactaaa 
     4621 attcttaaac tgctgaacaa aattaccata acctaacaac tgcaataact tagctgattc 
     4681 agcgtgacgc caacaaccat tattatacaa aaatggatta ctcaactcag tagggttggc 
     4741 agaagaatca acgtaattta ataacttatt aaggtaagca tgcaaagcag tataagatat 
     4801 aaaaggcatc tcagttgaca ctttagcatt agcaaaagga gaggtagcaa tctgcgaaat 
     4861 atcaccacca ttagcatttt tggtcatgtt tttaacctga ccctcaaaat acttccacaa 
     4921 acactgataa ggaacaaaaa agtactgtac attttcacga agacgagtaa aagcagcagt 
     4981 ctgcaaaggt gcagtacgag taaaataaga tgaatctaac ttaatagaat cacctgggtt 
     5041 aacctcttga acgaagcaag gcaacaactc accgacttta gcggtaaaga ggttacgatg 
     5101 tgagaggtca aaagaatttc gggaggtctt attcttaaga ccatgtaaac ccataatgtt 
     5161 actacgatta gccataatta ttgataaatg tgtttatacc tatctccaat ctcacgatgt 
     5221 ttaataagag aatcatgagt agagacagaa ttttcaacaa aattagtaaa atcagaatca 
     5281 gccaaaggaa actctaaaac agcggtagga gtaataaatc ttctatcgaa ccaaccacgg 
     5341 aaatatttag aatcattttc caatgctaaa taatgctctt tatacaaaga gagattaata 
     5401 tacttataaa aattagacca tatttcaaaa tattgtttgt gagacatgtt aagccatgaa 
     5461 caaagccaac agaaccgctt actagcatac aacacatcat gtaatgccga aaagtcttct 
     5521 gggtgaagac aatgttcaga caaatcaaac gtactttgca aatttaacaa tacatctgca 
     5581 ataggagagg gtatagtttc aagaggtcta gaataatagt aataatacca attctttaac 
     5641 cattgaacct gattacttac tctatagtaa ccggagagct taccgatttc ttcccagtac 
     5701 tcaaataaac gaaatatttt ttcattagac atattaacaa gtccagtgaa gacggggaag 
     5761 aatcgagagt aatacgaccg ccaaagggca taaggaatct gatagccctt gctagagtaa 
     5821 cgataatgaa ctctgaaata ttcgaagtcc tgagagacaa ttgctcgttg aatctcttct 
     5881 tctgccaaag tctgaccaaa gaaacgagag tgcagcgagt ggggtcttga taaagccgac 
     5941 aagcagaggg gaaagcgaga agtgctcgta acataaccgg aaacatagta ataagcggat 
     6001 ttgtttgtac gttcactagt cgcaaaaccg aacttccaaa gcgtacgtaa acactctgca 
     6061 caatcgtggt cgttgtaaaa tctgagatca gggtctttcc tgagttcttt gtccgtggga 
     6121 tggta 
//
