FEATURES             Location/Qualifiers
     gene            complement(130..624)
                     /locus_tag="Alpa_01"
     CDS             complement(130..624)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_01"
                     /translation="MIGKFNSLSSLEQGSGLIPNVEPDAFAVAPKFDSTEQLRVEIDDTDETRPVRYTSDVCLILHTKDLASRAGLAVASKFGQSKQPISQIQQIMDTMSDEDLLATIRSRYIQSPSEIIAWSKELSAYAENLESQAQELIDAENARQEAEKAAAAPAAASADAPSTE"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:hypothetical.protein"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(639..2480)
                     /locus_tag="Alpa_02"
     CDS             complement(639..2480)
                     /product="putative uncharacterized protein"
                     /protein_id="gnl|USP|Alpa_02"
                     /translation="MASYTGMSNLQNHPHRSGFDIGRKNAFTAKVGELLPVYWDISMPGDKYRFNIEYFTRTQPVETSAYTRLREYFDFYAVPLRLLWKSAPSVLTQMQDVNKIQALSLTQNLSLGTFLPSIPLSVLSDAMYLLNGRSWTPGNSSSLKNMFGFDRSDLCYKLLSYLGYGNLISSESTGRWWSTSVSSKNDASYTQRYIQNNYVNLFPLLAYQKIYQDFFRWSQWEASNPSSYNVDYFTGVSPSLISSLLSVSPDYWKSGTMFDLKYCNWNKDMLMGVLPNSQFGDVAVLDIPDSGDSNVVLGTDSHKSSVGIASAITSKTAPFPLFALDASPENPIPINSKLRLDLSSLKSQFTVLALRQAEALQRWKEISQSGDSDYREQIRKHFGVKLPQALSNMCTYIGGVSRNLDISEVVNNNLATEGDTAVIAGKGVGAGNGSFEYTTTEHCVVMCIYHAVPLLDYTLTGQDGQLLVTDAESLPIPEFDNIGMEVLPMTQVFNSPKASIVNLFNAGYNPRYFNWKTKLDVINGAFTTTLKSWVSPVTESLLSGWFCFGYNKDDAAPDTKVIMNYKFFKVNPSVLDPIFGVNADSTWDTDQLLVNSYIGCYVVRNLSRDGVPY"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP1"
                     /inference="similar to AA sequence:INSD:WP_021963493.1"
                     /inference="similar to AA sequence:INSD:WP_004291032.1"
                     /db_xref="InterPro:IPR016184"
                     /db_xref="InterPro:IPR003514"
                     /GO_component="GO:0019028 - viral capsid"
                     /GO_function="GO:0005198 - structural molecule activity"
                     /db_xref="eggNOG:bacteNOG05989"
                     /db_xref="eggNOG:bactNOG180503"
                     /db_xref="eggNOG:bctoNOG21249"
                     /db_xref="eggNOG:NOG133500"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(2501..4219)
                     /locus_tag="Alpa_03"
     CDS             complement(2501..4219)
                     /product="predicted protein"
                     /protein_id="gnl|USP|Alpa_03"
                     /translation="MITKELQNKLATRCQHPRTVVNKYTHEPVVVSCGCCPSCVLRRSAVQTNLLTTYSAQFRYIYFVTLTYAPRFLPTLEVSIIETCSDDIADVPCVPNINELDDSDPNTYLFGFRNIPRSASIKLKNSTVERTFKDPEVKFSYPMKPKELLSILGKVKHDVPNRIPYICNRDLDLFLKRLRSYYLDEKLRYYAVSEYGPTSFRPHWHLLLFSNSERFSETICENISKAWSYGRCDASLSRGFAAPYVASYVNSFVALPNFYTQMPKVVRPKSFHSIGFTESNLFPRKVRITEIDEVTNKCLDGVSVERNGRFRTIKPTWPYLLRLFPRFSDPIRKLPSSVYQLLLSALSAPARVIRGGCADITCDPFNVNAPSKQSILSFCKQYLNYVDNYGKSNECRNFLSPQANLPYSDVLILTECRLYDGTDLESTHRLSRVYRFFLGISKFIRTYSVDGCSELFWSSGTPGGELFGRDRFLRIISEKIVTFWNRYDYNRLVDFYQTLEDANDRDLVDFELRNYSFRYNRPPDNKEKPYNKLPLVRRLAAVALMKCRGKVKHKKLNDLSGLFFYQDDPDIV"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP4"
                     /inference="similar to AA sequence:INSD:WP_021963494.1"
                     /inference="similar to AA sequence:INSD:WP_008775335.1"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(4216..4524)
                     /locus_tag="Alpa_04"
     CDS             complement(4216..4524)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_04"
                     /translation="MNPELMKFVEWLLHRNIHFTVTSAFRTEKQNNECNGAKTSQHLTGDAIDLKPLYFSVDEFISMIKDSPFKFDQLIKYRSFIHISFARGRKPRLMELNFTDRK"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.peptidase.M15A"
                     /inference="similar to AA sequence:INSD:WP_008629051.1"
                     /inference="similar to AA sequence:INSD:WP_029886185.1"
                     /db_xref="InterPro:IPR013230"
                     /db_xref="InterPro:IPR009045"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(4607..4780)
                     /locus_tag="Alpa_05"
     CDS             complement(4607..4780)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_05"
                     /translation="MEKYYLCSIQSKLNPSQCETVLVPVDEVSDFVSSNLRPDCILIFSQCSTFKAISHEK"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:hypothetical.protein"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(5251..5886)
                     /locus_tag="Alpa_06"
     CDS             complement(5251..5886)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_06"
                     /translation="METLSNIDWGNLTAETRNYLRSTGLARAQLGYVKEQQEVDNMAMTGLIMRAQRSGMLLDNEAKGILNKYLDQEQQLDLNVKAADYYQRMSAGYLSYAETKKALADEALAAARTRGQKISNEVASRIAESQIAANIAANQSSEAYHNEELKLGLSQDNARSKNIEEWYRSRNEKKRYKYYDADKWVEYGTNIGNIIGNFLPRRIVSKTFPRR"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:hypothetical.protein.BACPLE"
                     /inference="similar to AA sequence:MV_prot:putative.VP2"
                     /note="1 probable transmembrane helix predicted by TMHMM"
ORIGIN
        1 ggttattcat ctgattaatc ttataattca tctggttggt ttcccggaca ttttgtctat 
       61 tctgcgaatt ctgaaccgca gaagaaccaa ggccaaggag accaccagtg attgaaccaa 
      121 gaagacccat tactcagtag agggagcatc agcggaagca gcagcgggag cagcagccgc 
      181 tttttctgct tcttgtctag cattttcagc atcaatcaat tcttgcgctt gggactcgag 
      241 attttcagca taagccgaca actccttaga ccaggcaata atctcagaag gagattgaat 
      301 ataccgagaa cgaattgtag ccaaaaggtc ctcatcggac atagtatcca ttatttgctg 
      361 gatttgagaa ataggctgtt tactttgtcc aaacttagaa gcaacagcaa gaccagcacg 
      421 agaggcaagg tccttagtat gaagaatcaa acaaacatca gaagtataac gcacagggcg 
      481 agtttcgtca gtatcatcaa tttctacacg aagctgctca gtagaatcaa atttaggagc 
      541 aacagcaaag gcatcaggtt caacattagg aataagccca gaaccttgtt ccaaactact 
      601 caaagaatta aattttccaa tcataaataa aacaaacttt aataaggtac accatcacga 
      661 gacaaattac ggacaacata gcaaccgata taagagttaa ccaataattg gtcagtatcc 
      721 caagtagaat ccgcattcac accaaaaatt ggatcaagaa cagaaggatt aaccttgaag 
      781 aacttgtaat tcataataac cttagtatcc ggggcagcat catctttatt gtatccaaaa 
      841 caaaaccatc cagaaaggag agattctgta acaggagaaa cccaagattt aagggtagta 
      901 gtaaaagctc cattgataac atcaagcttt gttttccaat tgaaataacg ggggttataa 
      961 ccggcattaa acaaattaac aatagaagct ttcggagaat tgaaaacttg tgtcatagga 
     1021 agaacctcca taccaatgtt atcaaactca ggaataggaa gagattcagc atcggttacc 
     1081 aataattggc catcctgtcc agtaagtgtg taatcaagca gaggaacagc atgataaata 
     1141 cacataacga cacaatgctc agtagtagta tactcgaaag aaccgttacc agcaccaaca 
     1201 cctttaccgg caataacagc agtatcacct tcagtggcaa ggttattgtt aacaacctca 
     1261 ctgatgtcaa ggttacgaga aacaccacca atataggtac acatattaga aagagcttgg 
     1321 ggcaatttca caccaaaatg cttgcgaatt tgttcacggt agtcactatc accagattga 
     1381 ctgatttctt tccaacgttg gagagcttca gcttgacgaa gagcaagaac ggtgaattga 
     1441 gacttaagag atgataaatc aagacgaagc ttggaattta taggtatagg attttcagga 
     1501 gaagcatcaa gtgcaaaaag ggggaacgga gcagttttag aagtgatagc agaggcaata 
     1561 ccaacagaac tcttatgcga gtcagttccc aaaacgacat tagaatctcc tgaatcagga 
     1621 atatccaaaa cagcaacatc tccaaattgg gaattaggaa gaacacccat caacatatcc 
     1681 ttgttccaat tacaatattt gaggtcaaac attgtaccag atttccaata gtcaggagac 
     1741 acagaaagaa gggaggaaat taaagagggg gaaactcccg taaaatagtc cacattataa 
     1801 gaagaaggat tagaagcttc ccattgagac caacggaaaa aatcctgata aatcttttga 
     1861 taagcaagaa gggggaaaag atttacataa ttattctgaa tataccgctg agtataagaa 
     1921 gcatcattct tagaagatac cgaagtagac caccaacgac cagtggattc agatgaaatt 
     1981 aaattaccat agccaagata actcaaaagc ttatagcaca aatccgaacg gtcgaaacca 
     2041 aacatattct ttagagaaga agaattacca ggagtccaac tacgaccatt aagaagatac 
     2101 atagcatcac taagtacaga taagggaatc gaaggtaaaa aagttccaag cgacaaattt 
     2161 tgagtcaaag acaaggcttg aatcttatta acatcctgca tttgtgttaa cacagaagga 
     2221 gcggacttcc aaagaagacg taacggcaca gcataaaaat caaaatactc acgcaaccgg 
     2281 gtataagcag aagtttcaac gggttgagta cgagtaaaat actcaatgtt aaaccgatac 
     2341 ttatcaccag gcatagaaat atcccagtaa accgggagaa gctcaccaac ttttgcagtg 
     2401 aatgcatttt tgcgtccaat atcaaatcca gaacgatgcg ggtgattctg aagattggac 
     2461 ataccagtgt aagaagccat agtaaaaaaa aattaaaaaa ttaaacaata tcagggtcat 
     2521 cctgataaaa gaaaagacca gacaaatcat taagcttctt gtgtttgacc ttacctcgac 
     2581 atttcatcaa cgccacagca gccaaacgac gaacaagagg aagtttattg taaggttttt 
     2641 ccttattatc aggaggcctg ttataacgaa aggaatagtt acgaagctca aaatctacca 
     2701 aatctctatc attagcatcc tccaaggttt gataaaaatc cacaaggcga ttataatcat 
     2761 aacgattcca aaaagtaact attttttcag agattattcg taagaacctg tctcgaccaa 
     2821 agagctctcc tccaggagtg ccgctggacc agaagagttc tgaacatccg tccacagaat 
     2881 acgttcgaat aaattttgaa attccgagaa aaaagcggta tacgcgggag agacgatgag 
     2941 tagattccaa atcagtacca tcgtacaaac gacattcagt aagaatgaga acatcactat 
     3001 acggtaaatt cgcctgagga gagaggaaat tcctacattc atttgatttt ccataattat 
     3061 ctacataatt taaatattgt ttacaaaaag acaaaatgct ttgcttagaa ggagcattta 
     3121 cattaaatgg atcacaagtt atatctgcac atccgccacg aatgactcgt gcgggcgcag 
     3181 agagcgcaga taataataat tggtaaacac tcgatggaag tttacgaata gggtccgaaa 
     3241 atcgggggaa taatcgaagg agatacggcc aagtaggttt aattgtgcga aaacgtccat 
     3301 tgcgctcaac gctgacacca tcaagacact tattggtaac ttcgtcaatt tcggtaattc 
     3361 gtacctttcg aggaaagaga tttgattctg taaatccaat ggaatggaag gatttaggtc 
     3421 gcaccacttt tggcatttga gtataaaagt tgggtaaagc gacaaaactg ttaacatacg 
     3481 acgcaacata cggagctgcg aatcctctcg acaatgatgc atcacaacgt ccgtaagacc 
     3541 aagccttaga tatattttca caaatagttt ccgagaatcg ctcggaattg gaaaacaata 
     3601 gcaaatgcca atgcgggcgg aaactggtag ggccgtattc tgatacagcg tagtaacgta 
     3661 atttttcatc caggtaataa cttcttaaac gttttaaaaa taaatccaag tcacgattac 
     3721 aaatataagg aatcctattt ggaacatcat gtttaacctt tccaaggata gataaaagtt 
     3781 ccttaggttt cataggataa gaaaacttaa cctcaggatc tttaaaagtt cgttcaacag 
     3841 tagaattctt caatttaata gaggcggaac gaggaatgtt gcgaaaacca aacaaataag 
     3901 tattagggtc actatcgtcc aactcattaa tattgggaac gcagggcaca tccgcaatat 
     3961 catccgaaca agtttcaata atcgaaacct ccaaagtagg aagaaagcga ggagcataag 
     4021 taagagtaac aaaataaata taacggaatt gagcagaata agtggtaaga agattcgtct 
     4081 gaacagcaga acgacgaaga acacatgaag gacaacaacc acaagaaaca acaacaggtt 
     4141 catgtgtata cttattgaca accgtacggg gatgctgaca acgagttgcc agcttattct 
     4201 gcaattcctt agtaatcatt ttctatcagt aaaattaagt tccattagac gaggcttgcg 
     4261 gccacgagca aaagaaatat gaataaaact tcgatatttt atgagttggt caaatttaaa 
     4321 aggagaatct tttatcattg aaataaactc atcaacagaa aaataaagag gtttcaaatc 
     4381 aatagcatca ccggttaaat gctgagaagt cttagcacca ttacactcat tattctgttt 
     4441 ttcagtacga aaagcggaag taacagtaaa atgaatattc cggtgtagaa gccactcaac 
     4501 aaatttcatt aattctggat tcatgactta cgaaaatatt tgagcaatag acgtaagaag 
     4561 actgacagca gccgcaataa ctgcagacca aattttagat ttagtttcac ttttcatgag 
     4621 aaattgcttt aaaagttgaa cattgagaaa aaataagaat acagtccgga cgaaggtttg 
     4681 aagagacgaa atcagaaact tcatcaacag gaacaagaac agtttcgcac tgactaggat 
     4741 ttaactttga ttggatagaa cacaaataat acttttccat aaacttaaaa atttaataaa 
     4801 ttagacatcg ttttttttaa gacagaacaa agataagaat aaagatttga aaaaaacaaa 
     4861 tgctcataca aattattaac ataaataaac aataaaatat gtgggtggca agctggtctg 
     4921 tgagtttgcg ctataaagac aaggggagac tgaaagcgat gaggtaaatc gctttcccta 
     4981 cgggcaaact catgtaggtt tcaccaaatt atattttaag gggtatagcg gcgacgagaa 
     5041 agaagtgatt tacggaaaat tgcttacgcg ttgcaaacgt caagtttaaa ggatgaaagt 
     5101 actataacct acggtttgaa tttcagtcga cgaggtctcc cgaaattcag gaggtgcata 
     5161 accacgcttc gcgcggttgc cggaagttac tccaaacaac aaaacccggc acgtatcgaa 
     5221 tacggccggg taaatgtaaa aaaaagaata tcaacgacga ggaaaggtct tagaaacaat 
     5281 cctacgaggc aagaaattgc ctataatatt accgatatta gtaccatatt caacccattt 
     5341 atcagcatca taatacttat atcttttctt ttcatttcta gaacggtacc attcctcaat 
     5401 attcttactg cgagcattat cctgagacaa accaagcttg agttcttcat tatgataagc 
     5461 ctcagaagat tgattagccg caatattggc agcaatttga gattcagcaa tacgagaagc 
     5521 aacctcatta gaaatttttt gaccacgagt ccgagcagca gccaaagctt catcagccaa 
     5581 agctttttta gtttcagcat aagaaagata tccggcagac atgcgctggt agtaatccgc 
     5641 agctttgaca tttaaatcaa gctgctgttc ttggtcaaga tacttattca aaatgccttt 
     5701 agcctcatta tcgaggagca tgccagaacg ctgagcacgc ataataagac cggtcattgc 
     5761 catgttatca acttcttgtt gttccttaac gtaaccaagt tgagcacgag ctagtccagt 
     5821 agacctcaaa taattacgag tttcagcagt aaggtttccc caatcaatat tagaaagagt 
     5881 ttccatg 
//
