FEATURES             Location/Qualifiers
     gene            complement(153..413)
                     /locus_tag="Alpa_01"
     CDS             complement(153..413)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_01"
                     /translation="MKKRQIKTIWIVNSNKFNTFKAFKRWLWYNLHTGEIIEGSQIWEDTIYKTYKIKKTERRLIVETTYDLEQEQKKYFENLQLKLFDK"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:hypothetical.protein"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(373..591)
                     /locus_tag="Alpa_02"
     CDS             complement(373..591)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_02"
                     /translation="MAATKFTAIYVNNDGKLIEKEIPGMNTYKIAEKFAIMLNDTEETKVVCVIESWKLYPNENEKKTNKNNLDSK"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:hypothetical.protein"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(1138..2136)
                     /locus_tag="Alpa_03"
     CDS             complement(1138..2136)
                     /product="putative replication initiation protein"
                     /protein_id="gnl|USP|Alpa_03"
                     /translation="MCLYPKLIRNKKYLPTKKNNYNPPKMVDPRTAYITAACGKCLECRKQKQREWLVRMSEELRTEPNAYFMTLTISDENYEILKNTCKSEDKNTIATKAIRLTLERIRKKTGKSIKHWFITELGHEKTERLHLHGIVWGIGTDQLIKEKWNYGITYTGNFVNEKTINYITKYMTKIDEDHPEFVGKVLCSKGIGAGYIKRADASKHKYEKGKTIETYRLRNGAKINLPIYYRNKLFTEEERELLFIDKIEKGFIYVLGTKVHRDDEEYYIQLLEEGRKKEAILYGEHNQDWEQQKYINRLRKQKKKQEQELNQLEIYWALERAKDYTQLETCPF"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP4"
                     /inference="similar to AA sequence:INSD:WP_022044634.1"
                     /inference="similar to AA sequence:INSD:CDN73649.1"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(2136..3200)
                     /locus_tag="Alpa_04"
     CDS             complement(2136..3200)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_04"
                     /translation="MALGGFFGAFANILGGLATSSIQRSDNEYLMNRQAELNKEQADYSTDLAKNYWDYTNFENSVKHLKEAGLNPALYYAKGGQGGSTGGGQAQGVGLPSTTPTMARIQAQGMGAQLQNVLSQVELNKATAKKTEAEAEKIAGADTKVAEREAEMLASQSEFNRRITRLQDSIEKLTNAQEQKTAAEYFYIQAQEKKVWEEVREQIVKSDIAEETKEAMIKKTGLENFNLMQAGIESITRQKLNSEQINYLKGQLAIGWANVAIGEKSVSNEADRIANDLMMGMKDLDRKDRELIKDWIYEGIHAGKEISGEILNWLMRGTPKTITEITSRLEEMFDAKGNETGSKMVKQTITKGAK"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="protein motif:Phobius:1.01"
                     /note="Signal peptide predicted by Phobius with cleavage site between residues 18 and 19 "
                     /inference="protein motif:SignalP:4.0"
                     /inference="similar to AA sequence:MV_prot:hypothetical.protein.BACPLE.00802"
                     /note="1 probable transmembrane helix predicted by TMHMM
                     Signal peptide predicted by SignalP 4.0 (Signal peptide probability ) with cleavage site probability  between residues 18 and 19"
     gene            complement(3346..3666)
                     /locus_tag="Alpa_05"
     CDS             complement(3346..3666)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_05"
                     /translation="MYKKTIIPGYTGRMKSVECFEGEQIEEKVRRIVNNNEPITDGAPIIFTEKKDGVRPEYNVRTDRWDIALDAMNKIDMARKAHKENEVKPEDFGNVPDKQNGSPSEN"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:hypothetical.protein"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(3671..5449)
                     /locus_tag="Alpa_06"
     CDS             complement(3671..5449)
                     /product="putative uncharacterized protein"
                     /protein_id="gnl|USP|Alpa_06"
                     /translation="MFFCNDIESHVLTHPTVGPLFGSFKHENHIFSIPIRLYNSWLHNNRTKIGLNMSDIKLPQLSISINKTKDNPTPDNQWSQINPSCLLAYLGIRGYAYNTTTTSQEVTVQKMAVPLLGYFDIFKNYYANTQEENFYIIGATETITNIKVTQAEGAIHTSTTPDKINIGIASGDSVEITPKNTYEADELIITWFDMSTETTRTGKPTEFGTWSKTSGNWNVVMAPTQVGLLMSITPKNRVQLQDYPLEEIDEMRDKILSTKGNITSIPNNSNIALYDSFGKRLPNGKLNTTSSQYGLCLKTYNSDLLQNWINTEWIDGVNGISEVTAIDVTDGKLTMDALNLQQKVYNMLNRIAVSGGTYRDWLETVFTGGNYMERCETPIFEGGMSTEIVFQEVISNSASGEQPLGTLAGRGYDTGKQKGGHVKIKVTEPSFIMGIGSITPRIDYSQGNEFYNEFLTLDDIHKPALDGIGYQDSLNWQRAWWDDNRMEKNGRLQPSAGKTVAWLNYMTNINRTFGNFAINDNEAFMVLNRNYEMSPSAGTNETKIADLTTYIDPVKYNYIFAETNLDAMNFWVQTKFDIKVRRLISAKQIPNL"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP1"
                     /inference="similar to AA sequence:INSD:WP_022044635.1"
                     /inference="similar to AA sequence:INSD:WP_005867318.1"
                     /note="1 probable transmembrane helix predicted by TMHMM"
ORIGIN
        1 gtgttgtaaa tgtattgcaa taatcattgt ggaaatgctc ttacaatttc tatccattgg 
       61 ttacctgtga ttttcatttt tttagttttt aaatgttcca taaaatatca ttcctatgct 
      121 tataagcaat agtaatgtta atattcctag tatcatttgt caaatagttt taattgtaaa 
      181 ttttcgaagt attttttttg ttcttgttct aaatcgtaag tagtttctac tattagcctc 
      241 ctttctgttt ttttaatttt gtaagttttg taaattgtat cttcccaaat ttgagagcct 
      301 tctattattt ctcctgtgtg gagattgtac catagccatc ttttgaacgc tttaaatgta 
      361 ttgaatttat tgctatttac tatccaaatt gtttttattt gtcttttttt cattttcgtt 
      421 aggatataat ttccatgatt cgattacaca tactactttt gtttcttctg tgtcatttag 
      481 cattatagcg aatttttctg ctattttgta cgtgttcata cccggtattt ctttttcgat 
      541 taatttaccg tcattgttta cataaattgc tgtgaatttt gttgctgcca tagcttttaa 
      601 attttaaatt gttatactta tgttttttat tacattgcaa atatacttgt tttttctgat 
      661 ttcttcaaat tttctggtat ttgtctgaag cttttaacct ttattagtaa tagtatcttt 
      721 aagcctccgt ggcgtttgaa cggtgatgga gcaatagagg gcgcatagcc ctccttagcg 
      781 actagcacct tgatatcgac gaagtcgcac accacgacca taggtcgggt gcacgtcact 
      841 cccttatctt ggtcttaagg tagctgtctc ccggattaag gcatatctca ccctcccgct 
      901 atacactctt ggccacccgg cccgaggtgt taaataaaac ttatgtttga ttattcagat 
      961 ttctgccttt tgctgtggtt ctcgtccgct aggtcgctgt aaggctggaa gcctttcagc 
     1021 gtaagcgtag acggcgtccc gtgccgtcca gcgccgccgt tgcgttagca ggcgttaaaa 
     1081 tcggagcgaa gcgacttcct agagaaaatt acccctttgg cggctggtta gcagtcatca 
     1141 gaacggacat gtttctagtt gtgtgtagtc tttagctctt tctagtgccc aatatatttc 
     1201 tagttgattg agttcttgtt cttgtttttt cttttgtttc cgtagtctgt tgatatattt 
     1261 ttgttgttcc cagtcttgat tatgttcacc atagagtata gcttcttttt ttcttccctc 
     1321 ttcgagaagt tgtatataat attcttcatc gtctctatga acttttgttc ctagtacgta 
     1381 aatgaatccc ttttctattt tgtcgataaa gagtagttct ctttcttctt ctgtgaatag 
     1441 tttatttctg taatatattg gtaaatttat ttttgctccg tttcgtagcc tgtaagtttc 
     1501 tatggttttt cctttttcgt atttgtgttt gcttgcgtca gctcttttta tgtatcctgc 
     1561 tcctatgcct ttagagcata gtacttttcc aacgaattct ggatgatctt catctatttt 
     1621 tgtcatgtat ttggttatgt aatttattgt tttttcgttt acaaagttcc cggtataagt 
     1681 tattccgtag ttccattttt cctttatcag ttggtctgta cctattcccc aaactatccc 
     1741 gtgcaaatgt aatctttctg ttttctcgtg tcctagttct gtaataaacc aatgctttat 
     1801 agattttcca gttttttttc ggatacgttc taatgtaaga cgtatcgctt ttgttgctat 
     1861 tgtgttcttg tcctctgatt tgcatgtatt ttttagtatt tcgtagtttt catcggaaat 
     1921 ggttagtgtc atgaagtagg catttggttc tgttcttagt tcctcgctca ttctcactag 
     1981 ccattccctt tgcttttgtt tccgacactc taagcatttt ccgcatgctg cggttatata 
     2041 tgccgttcta ggatctacca tttttggcgg attatagtta ttcttttttg ttggcaaata 
     2101 ttttttattt cttatgagtt tcggatatag acacattatt tcgctccttt cgtaatagtt 
     2161 tgttttacca tttttgaacc tgtttcattt cctttagcat caaacatttc ttctagtcgg 
     2221 cttgttattt ctgtgattgt ttttggtgta cctctcatta gccaattgag aatttctccg 
     2281 gatatttctt ttcctgcgtg tataccttcg tatatccaat ctttgataag ttcgcggtct 
     2341 tttcggtcta ggtctttcat tcccatcatt aaatcatttg cgattctgtc ggcttcgttt 
     2401 gatactgatt tttcacctat tgccacgtta gcccatccga ttgctagttg ccctttaagg 
     2461 tagtttattt gctcgctgtt gagtttttgc cttgtgattg attctatacc tgcttgcatc 
     2521 agattgaagt tttctagccc tgttttttta atcatggctt cttttgtttc ttctgctatg 
     2581 tcagatttta caatttgttc gcgtacttct tcccaaactt tcttttcttg tgcttgaata 
     2641 tagaagtatt ccgctgccgt tttttgttct tgtgcgttgg ttagcttttc tatgctgtct 
     2701 tgtagtctgg tgattcgtct gttgaactcg ctttgtgatg ctagcatttc ggcttcacgt 
     2761 tctgctactt ttgtgtcagc tcctgcaatt ttttcggctt ctgcctctgt tttttttgct 
     2821 gttgccttgt tgagttctac ttgtgataat acgttttgta attgtgctcc cattccttgg 
     2881 gcttgtattc ttgccattgt tggtgtcgta gatggtagtc ctactccttg ggcttgtcct 
     2941 cctccagttg atcctccttg tcctcctttt gcatagtata atgcaggatt taatccggct 
     3001 tcttttaagt gttttacact gttttcgaag tttgtgtagt cccagtaatt ttttgctagg 
     3061 tctgttgaat agtcggcttg ctctttgttg agctccgctt gtctattcat tagatattcg 
     3121 ttatctgatc tttgtatgct tgatgttgca agtccgccta atatgttggc gaatgctcca 
     3181 aaaaatcctc ctagtgccat aataatttat atttacatgt tttcgagctt tttctaaaag 
     3241 ctcttttcta tatacttgat atattatagt agatgcgtac cgtcgttcaa tttattaggg 
     3301 gaatttttta caattcccct ctagacgtgc agctactgac tcgcatcagt tttcactggg 
     3361 cgacccgttt tgtttatcag gaacgtttcc gaaatcttct ggttttactt cgttttcttt 
     3421 atgtgccttt cttgccatgt ctatcttatt catagcatct agtgctatgt cccatctgtc 
     3481 cgtacgtacg ttgtattcag ggcgtacacc gtcttttttt tctgtaaaga tgattggtgc 
     3541 tccatctgtg attggttcgt tgttgttaac gattcttctt actttttctt cgatttgttc 
     3601 accctcgaag cattctacgc ttttcatgcg tccggtatat cctggtataa ttgttttttt 
     3661 atacataatg ttataaattt ggaatttgtt ttgcactgat taaacgtctc actttaatgt 
     3721 caaactttgt ttgtacccag aagttcatag catctagatt tgtctctgca aaaatgtagt 
     3781 tgtattttac tgggtctatg tatgttgtta agtcggctat tttggtctcg tttgttcctg 
     3841 ctgatgggct catctcatag tttctattga gaaccataaa tgcctcgtta tcgttgattg 
     3901 caaagtttcc gaacgttctg ttgatatttg tcatgtagtt aagccaagcg accgtttttc 
     3961 ctgctgatgg ttgtaatcta ccgttctttt ccatgcggtt atcatcccac catgctcttt 
     4021 gccagtttag tgaatcttgg tatccgattc cgtctagtgc tggtttgtga atatcgtcca 
     4081 gtgttaggaa ttcgttgtaa aattcattac cttgtgagta atcgattctt ggagttattg 
     4141 aaccaatgcc cataatgaaa gatggttctg ttactttgat ttttacgtga cctccttttt 
     4201 gtttacctgt gtcatatcct ctacctgcta gtgttcctag tggttgctct ccgcttgcgc 
     4261 tgttgcttat gacttcttgg aatacgattt cagttgacat accaccctcg aatatgggtg 
     4321 tttcacatct ttccatgtag ttgcctcctg taaatacggt ttctaaccag tctctgtatg 
     4381 taccgccgct tacagcgatt ctgtttagca tgttgtaaac tttttgttgt aaatttaagg 
     4441 catccattgt aagtttgccg tctgttacat ctattgctgt cacttcgcta attccgttta 
     4501 ctccgtctat ccattcggta ttgatccagt tttgaagaag gtcactatta tatgttttta 
     4561 ggcatagtcc gtattgtgaa ctggttgtat ttagttttcc gtttggtagt cttttaccga 
     4621 atgaatcata tagagctata ttactattat ttggtatgct tgtgatattt ccttttgttg 
     4681 ataatatttt atcacgcatt tcgtcaatct cttctagagg ataatcttgt aattgtacac 
     4741 ggttttttgg tgtgattgac attagtagcc ctacttgtgt tggtgccatt actacgttcc 
     4801 aatttccgga agttttagac catgttccga attcagttgg tttacctgtc ctagttgttt 
     4861 ctgttgacat atcaaaccac gttataataa gttcgtctgc ttcgtatgta ttttttggag 
     4921 ttatttcaac gctgtctccg cttgcaattc ctatatttat tttatctggt gttgttgagg 
     4981 tgtgtatagc tccttctgct tgtgttactt ttatatttgt aattgtttcg gttgctccaa 
     5041 taatatagaa attttcttct tgtgtattgg catagtaatt tttgaagatg tcaaagtatc 
     5101 caagtaatgg cacagccatt ttttgaactg ttacttcttg gcttgttgtt gttgtattat 
     5161 atgcatatcc tcgtatccct aagtatgcta gtagacaact tgggtttatt tgtgaccatt 
     5221 gattatctgg tgttggatta tcttttgttt tattgatact tattgataat tgtggtaatt 
     5281 tgatgtctga catatttaga ccgatttttg ttcggttgtt gtgcagccaa ctgttgtaaa 
     5341 gtctgatagg tatactgaat atgtgatttt cgtgtttgaa gcttccgaat agtggtccta 
     5401 ctgttggatg tgtcagtaca tggctttcta tgtcattaca aaaaaacatt ggtaaaacac 
     5461 cataggtgac aacaataaaa tgtcagtcaa cctacacacc tataacatga gtactcacga 
     5521 cttgagtaca atattcagaa acactcaaag cgcaggaaca ctagttccaa accttgtact 
     5581 actagctcaa aaaggtgata caatagatat cgacatagaa agccatgtac tgacacatcc 
     5641 aacagtagga ccactattcg gaagcttcaa acacgaaaat cacatattca gtatacctat 
     5701 cagactttac aacagttggc tgcacaacaa ccgaacaaaa atcggtcta 
//
