FEATURES             Location/Qualifiers
     gene            40..267
                     /locus_tag="Alpa_01"
     CDS             40..267
                     /product="putative uncharacterized protein"
                     /protein_id="gnl|USP|Alpa_01"
                     /translation="LPPVDSDYMHVFFGDVVPEEGSPILSYTWFKVNPSVLNPIFGVAVDGSWNSDQLLCNCQFNVKVARNLSYDGMPY"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP1"
                     /inference="similar to AA sequence:INSD:WP_021963493.1"
                     /inference="similar to AA sequence:INSD:WP_008775336.1"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            596..1099
                     /locus_tag="Alpa_02"
     CDS             596..1099
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_02"
                     /translation="MKKDVIIRGFARYSLNRDNQLHNCTCRGVHSAAVALSGVLREQSPVEDFLFEDNFDGSRTFVSDYSVLSGQAAIDQMNPTQLRRYLNGLRPSSSPYTHRYNDDFLLEYCKDRNIQSYTEMQAWLEHLISEGQSLENDVAAYQAAKLAEQQQAVENQQNQQSAQNSTE"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:hypothetical.protein"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            1096..2193
                     /locus_tag="Alpa_03"
     CDS             1096..2193
                     /product="predicted protein"
                     /protein_id="gnl|USP|Alpa_03"
                     /translation="MIGAAIGAAGSLASGVVNAIGNNRQGSKNRKHQLEMQRIQNEWASSESQKSRDFAKSMFDATNEWNSAKNQRARLEEAGLNPYLMMNGGSAGTASSTSANTVSGASGSGGTPYQYTPTNIIGDVASFAGAMKSLSEARKTNTESDLLGKYGDSDYSSRIANTEADTYFKQRQSDVATAQRANLLLSSKAQEIMNMYLPQEKQIELSTLGAQYWNLIRDGSIKEEQAKNLLATRLEIAARTAGQHISNKVARSTADSIIDATNTAKMNEAAYNRGYSQFSNDVGFRTGKMDRWLQDPVKARWDRGINNAGEFIEGLSNIVGSVTKFGFLRNANQRLKEDKRQFDRGTVDIFDDNKGYSWTRQHRGR"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="protein motif:Phobius:1.01"
                     /note="Signal peptide predicted by Phobius with cleavage site between residues 19 and 20 "
                     /inference="similar to AA sequence:MV_prot:hypothetical.protein.BACPLE"
                     /inference="similar to AA sequence:MV_prot:hypothetical.protein.BACEGG.02723"
                     /inference="similar to AA sequence:INSD:WP_008775338.1"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            2599..3801
                     /locus_tag="Alpa_04"
     CDS             2599..3801
                     /product="predicted protein"
                     /protein_id="gnl|USP|Alpa_04"
                     /translation="MINNRSKAYGSCLHPRVIKNKYTGDPVYVPCGTCEFCIHNKAIKAELKCNVQLAASKYCEFITLTYSTEYLPVGEFYKGASGEVRFRCLPRDFVYSYKTVQGYNRNISFNDEYFDFDTQLSWESAQLLQKKTHLHYTSFPDGRRIYNRPYMENLIGYLNYRDMQLFFKRLNQNIRSVTNEKIYYYVVGEYGPTTFRPHFHILLFHDSKELRQSIRQFVSKSWRFGDTDTQPVWSSASCYVAGYVNSTACLPDFYKNFSHIKPFGRFSMHFAESAFNEVFKPQEDEEIFSLFYDGRMLELNGKPTLVRPKRSHINRLYPRLNKSKHASVDDDIRVATALSNIPHVLAKFGFIDEVTDFEMSKRIYYLIRRYLEIDHTLKYAPEQLRLIYNYLSFVVVYKFF"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP4"
                     /inference="similar to AA sequence:INSD:WP_021963494.1"
                     /inference="similar to AA sequence:INSD:WP_008775335.1"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            3776..4219
                     /locus_tag="Alpa_05"
     CDS             3776..4219
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_05"
                     /translation="LSLYINFSDESGCSAVYRLLLNYRNLVNNWITAPVGSVAFTGQLRYAVRSIHSFYDYCAKRSLRDQLLKVEKWSNDSYVRENLSIYYFYPLTDVDIMKCSYSEIVFYSPVLRASYADYAADNRERIKHKALNDKNSLLIAAVDKKPV"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP4"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            4222..4386
                     /locus_tag="Alpa_06"
     CDS             4222..4386
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_06"
                     /translation="MKEKKYFFAVLHYMGGKRRVAIRLDSAVIDSYLKAGYIIEISDSICVVEEPKLD"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:hypothetical.protein"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            4517..4792
                     /locus_tag="Alpa_07"
     CDS             4517..4792
                     /product="uncharacterized protein"
                     /protein_id="gnl|USP|Alpa_07"
                     /translation="LRDAFGKPICINSGYRSNFVNEAVGGVSNSQHKFGYAADISVSSRDSISELFALIQKMELPFDQVIYYRKAGFIHVSWSPTYRKQIIVRDV"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.peptidase.M15A"
                     /inference="similar to AA sequence:MV_prot:putative.peptidase"
                     /inference="similar to AA sequence:INSD:WP_022064418.1"
                     /inference="similar to AA sequence:INSD:WP_009292856.1"
                     /db_xref="InterPro:IPR009045"
                     /db_xref="InterPro:IPR013230"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            4785..4994
                     /locus_tag="Alpa_08"
     CDS             4785..4994
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_08"
                     /translation="MSKVDSFPSIHNSVVDGIPENYVHYYKKYLYEIEFFRFKKGVSVDSRYCDVPVAEKEKQLIINFKFEEK"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:hypothetical.protein"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            4991..5677
                     /locus_tag="Alpa_09"
     CDS             4991..5677
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_09"
                     /translation="MSSLFSYGDIKNTPRRSGFDLSNKCAFTAKVGELLPVYWKFCLPADKFNISQEWFARTQPVDTSAFTRIREYYEWFFVPLHLLYRNSNEAIMSMENQPNYAASSSASISFNRNLPWIDLATINTAIGNVQSSASPNNFFGVLRSEGFKKLVSYLGYGETSPEKYVDNLRCSALPLYAYQKIYQDYYRHSQWEKSKPWTYNCDFWNGEDSTPVASSLDLFSQNPNDSVF"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP1"
                     /inference="similar to AA sequence:INSD:WP_004291032.1"
                     /inference="similar to AA sequence:INSD:WP_021963493.1"
                     /db_xref="InterPro:IPR016184"
                     /db_xref="InterPro:IPR003514"
                     /GO_component="GO:0019028 - viral capsid"
                     /GO_function="GO:0005198 - structural molecule activity"
                     /db_xref="eggNOG:bacteNOG05989"
                     /db_xref="eggNOG:bactNOG180503"
                     /db_xref="eggNOG:bctoNOG21249"
                     /db_xref="eggNOG:NOG133500"
                     /note="1 probable transmembrane helix predicted by TMHMM"
ORIGIN
        1 gttcgtggtg tcgtttacgg attactttga aatcttggat tgcctcccgt tgattctgat 
       61 tatatgcacg tgtttttcgg tgacgttgtg cccgaagaag gtagtccaat actttcttat 
      121 acttggttta aggttaatcc ctcggtgctt aatcctattt ttggtgtggc tgttgatggt 
      181 tcttggaatt cggaccaatt actttgcaat tgccagttta atgtgaaagt agcgcggaat 
      241 ctgtcttatg atggtatgcc ttattagtta atcgcagcct accttcaacc tgaggccagc 
      301 gaagcgaggc cgattgccgg cctcaggtta cttctgtatt tccgcttatg aactgaaagt 
      361 agcgcggaat ctgtcttatg atggtatgtc ttattagtta accgcagtct actctcaacc 
      421 tgaggccagc gaagcgaggc cgattgccgg cctcaggtta cttctgtatt tccgcttatg 
      481 aacggacttt tgactatgct aaggagtgag gcgttgtccc gccgaactaa gaaatgggaa 
      541 cgtagtgact tccttaagat ggttatttat ttatttattt atttagttat tcgttatgaa 
      601 aaaagatgtt attattagag gttttgcacg ttattcgtta aatcgtgaca atcaacttca 
      661 taattgtact tgtcgtggtg tacattctgc cgctgttgct ctttctggtg tattacgtga 
      721 acaatcacct gttgaggatt tcctttttga ggataatttt gacggttcga gaacgttcgt 
      781 tagtgactat tctgttcttt ctggtcaagc tgcaattgat cagatgaatc cgactcaatt 
      841 acgtcgttat ctgaatggtt tacgtccgtc ttcttctcct tatactcacc gttataatga 
      901 tgatttcctc ctggaatatt gtaaggacag aaatatccag tcttatactg aaatgcaggc 
      961 ttggttagag caccttattt ctgagggtca atctcttgaa aatgatgttg ccgcttatca 
     1021 ggctgctaag ttggctgaac aacaacaggc tgtcgaaaat caacaaaatc aacaaagtgc 
     1081 ccagaattct actgaatgat tggtgcagct atcggcgctg ctggctcttt agccagcggt 
     1141 gttgttaatg ccattggtaa caatcggcaa ggttctaaga atcgtaaaca tcagcttgaa 
     1201 atgcagcgga ttcagaacga atgggcaagt tctgaatctc agaaatcacg tgattttgct 
     1261 aaatcaatgt ttgacgctac gaacgaatgg aactccgcta aaaatcagcg tgcacgctta 
     1321 gaagaagctg gtttaaatcc ttatttgatg atgaatggtg gttctgctgg tacggcttct 
     1381 tctacttctg ctaatactgt ttcaggtgct tctggttcag gtggtacacc ttaccagtac 
     1441 acccctacga atattattgg cgatgttgct tcttttgctg gcgctatgaa atctctttcg 
     1501 gaagctcgta agactaatac ggaatctgat cttttgggta aatatggtga ttctgattat 
     1561 tcttcccgta ttgctaatac ggaagctgat acttatttta aacaacgtca atctgatgtt 
     1621 gctactgctc agagagctaa tttacttttg tcttctaaag ctcaggaaat tatgaatatg 
     1681 tatctcccgc aggaaaagca aatagagctt tcgactcttg gcgctcagta ctggaacttg 
     1741 attcgtgacg gttctattaa ggaagagcaa gcaaagaatt tacttgctac tcgtttggaa 
     1801 atcgccgcgc gtacagctgg ccaacatatt tctaataagg ttgctcgttc tacagctgat 
     1861 tctatcatcg atgctactaa tactgctaag atgaatgagg ctgcatataa ccgtggttat 
     1921 tcccaatttt ccaatgatgt cggttttcgt acgggaaaaa tggaccgttg gcttcaagac 
     1981 cccgttaaag ctcgttggga tagaggtatc aataacgcag gtgagtttat tgaaggtctc 
     2041 tcaaatattg ttggttctgt tactaagttt ggtttcttaa ggaatgctaa ccaaaggtta 
     2101 aaagaagata aacggcaatt tgatagaggt actgtcgata ttttcgacga taacaaaggt 
     2161 tattcttgga ctcgtcaaca tcgtggacgt tgatgtttat ttgttttatt tgttttactc 
     2221 tcttaaggga ttggctttag ctttacagcc agtccctttt ccgtatggcc ctcctgcttc 
     2281 acttttctac ctgtcccctc tgtccgccca gctgcatggg gggcccctct ggggggagct 
     2341 cgcaggctcc ctaaatctct atgacgagac gggagtcgag catgaaaaaa acgtcggccg 
     2401 tccacgggcc gcagccgtgg ccgccggagg catcataaag ttaagctatt ttactctggt 
     2461 acgaagttcc ccgactttcg tgcgaagcaa atcgacttaa ttgttattgt cgattcaaac 
     2521 acccttgttc acgattggcg aaagtcacat cactatatag gtattgtata tatcaaaatt 
     2581 agtttttata tttgcggcat gattaacaac cgcagtaaag catatggctc ttgtcttcat 
     2641 ccccgtgtga taaagaacaa atatacaggt gaccctgtgt atgttccttg cggcacgtgt 
     2701 gaattttgca tacacaataa ggctattaag gctgagttga aatgtaatgt tcaattagcc 
     2761 gcttctaagt attgcgaatt tattactctg acctattcaa cggagtattt gccagtcggt 
     2821 gagttttata aaggtgcttc tggtgaggta agatttcgtt gtttacctcg tgattttgtt 
     2881 tattcatata agaccgttca aggttataat cgtaatatat cattcaatga tgaatatttt 
     2941 gactttgata ctcaattgtc ttgggaatct gcacaattat tgcagaagaa gacgcattta 
     3001 cactatactt cttttcctga tggtcggcgt atttataata gaccttatat ggaaaatctt 
     3061 atcggttatc ttaactatcg tgatatgcag ctttttttta agcgtttaaa tcaaaatata 
     3121 aggagtgtta caaatgaaaa gatttactac tacgttgttg gagaatatgg accaacaaca 
     3181 ttccgtccgc atttccatat cttattattc cacgactcga aagagctcag acaaagtata 
     3241 cgacagtttg tttctaagag ttggcgcttt ggtgatacag atacgcaacc tgtctggtct 
     3301 tccgcttcat gttacgttgc gggatacgtc aatagtactg cgtgccttcc cgacttttat 
     3361 aagaatttta gccatattaa gccgttcggc cgattttcta tgcattttgc ggaatccgct 
     3421 tttaatgaag tgtttaaacc gcaagaagat gaagaaatat tctctttatt ctatgatggt 
     3481 cgaatgctcg aacttaatgg aaagcctaca cttgtgcggc ctaaaaggtc gcatatcaat 
     3541 cgactatacc cccgacttaa taagtctaag catgcgtctg tggatgatga tatacgagtt 
     3601 gcaacggctt tatcaaatat cccccacgtc cttgcaaaat ttggcttcat tgacgaagta 
     3661 actgattttg aaatgtctaa gcgtatatat taccttattc gtaggtattt ggaaattgac 
     3721 catacattga aatatgctcc cgaacaactt aggttgattt ataactactt gtcgtttgtc 
     3781 gttgtatata aatttttctg acgaaagtgg ttgttctgct gtctatcgtt tgttgcttaa 
     3841 ttatcgtaac ttggttaaca actggataac tgcgcctgtt ggtagtgttg cttttactgg 
     3901 tcaattacgt tatgccgttc gttcaattca ttctttctat gattactgcg ctaaacgttc 
     3961 tttgcgtgac cagttgttga aagttgagaa atggtctaat gattcttatg tacgtgagaa 
     4021 tttatctata tattattttt acccgttgac ggatgtagat ataatgaagt gttcttattc 
     4081 agagatagtg ttttatagtc ctgttttacg agccagctat gcagattatg cggcggataa 
     4141 tcgtgagcgt ataaaacaca aagctctgaa tgataagaac tctttgttga ttgctgccgt 
     4201 tgacaaaaaa cctgtttagt tatgaaagaa aagaagtatt tttttgctgt cctccattat 
     4261 atgggaggca aacgtagggt tgctattcgt ttagactctg ctgttattga ttcgtatttg 
     4321 aaagctgggt atattattga aatctcggat tctatctgtg tggtagaaga acctaaattg 
     4381 gattgatatg tataagccta aacatttttc tttgttggaa ttggtcaata ccagtacaac 
     4441 aaccttggcg aacaatatcc caacctggga ttctttgtta aacttgactt acctctgtaa 
     4501 gtatatactt gacccgttgc gtgacgcttt cggaaagcct atttgtatta attccggtta 
     4561 tcgttcgaat tttgtaaacg aggctgttgg tggtgtttcg aactctcagc ataaatttgg 
     4621 ctatgctgct gatatttcgg ttagcagtcg tgattctatc tctgagctgt ttgctttgat 
     4681 tcagaaaatg gagttgccgt ttgatcaggt tatttactac cgtaaagctg gctttatcca 
     4741 tgtttcttgg tctccgactt atcggaagca gattattgtt agggatgtct aaagttgatt 
     4801 ctttcccgtc tattcacaat agtgtagtag acgggatacc tgaaaattac gttcactatt 
     4861 ataaaaagta tttgtatgaa attgaatttt tccgttttaa aaaaggtgtt tctgttgatt 
     4921 cacgatattg tgacgttcct gttgcagaga aagaaaaaca attaattatt aattttaagt 
     4981 ttgaagaaaa atgagtagtt tattttctta tggcgatatt aaaaatacgc ctcgccgttc 
     5041 tggctttgat ttgtctaata agtgtgcctt tacagctaag gtaggtgagc ttttgcctgt 
     5101 ctattggaaa ttctgtttgc ctgccgataa gtttaatatt tcgcaagaat ggtttgcacg 
     5161 tacacagcct gttgacactt ctgcgtttac ccgtatacgt gaatattacg agtggttttt 
     5221 tgtgcctctt cacctccttt accgtaacag taacgaggca attatgtcaa tggaaaatca 
     5281 acctaactat gcggcttcta gctctgcttc tattagtttt aatcgtaatt tgccgtggat 
     5341 tgatttggca actattaaca ctgctattgg taatgttcag tcttcggctt cgccaaataa 
     5401 tttttttggt gttcttcgct cagagggttt taaaaaactt gttagctatt tgggatatgg 
     5461 tgaaacttca cctgaaaagt atgttgacaa tcttcgttgt agcgctttac ccctttatgc 
     5521 ttatcagaag atttatcagg actattacag acattcccag tgggaaaaga gtaagccatg 
     5581 gacttacaat tgtgactttt ggaatggaga ggattctaca cccgttgctt cttctttaga 
     5641 cttgttttct caaaatccga atgattcggt tttttgagct tcgttatgct aactggaatt 
     5701 aa 
//
