FEATURES             Location/Qualifiers
     gene            21..998
                     /locus_tag="Alpa_01"
     CDS             21..998
                     /product="unnamed protein product"
                     /protein_id="gnl|USP|Alpa_01"
                     /translation="LSDIVPTPGTVPVKWNDANNVVSDAQWLLGGKNYNGTITSNDISLTKTNTGPTYSAVTPINLWAVNDGSVSSATINQLRLAFQVQKLYERDARGGTRYIEVLKSHFGVTSPDARLQRPEYLGGNRIPIVISEINQTSGTSANSTPQGNPSGQSRTTDVHSDFKKSFVEHGFIIGVMVARYDHTYQQGLERFWSRKGRLDYYWPVFANIGEQAVLNKEIYAQGNGTDDEVFGYQEAWADYRYKPNRVTGEMRSQAPQSLDVWHLGDDYSKLPSLSDSWVQEDSAVVNRVIAVSEENSNQLWADIFIKNKCTRAMPMYSIPGLIDHH"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP1"
                     /inference="similar to AA sequence:INSD:CDL65904.1"
                     /inference="similar to AA sequence:INSD:CDL66947.1"
                     /db_xref="InterPro:IPR016184"
                     /db_xref="InterPro:IPR003514"
                     /GO_component="GO:0019028 - viral capsid"
                     /GO_function="GO:0005198 - structural molecule activity"
                     /db_xref="eggNOG:bacteNOG05989"
                     /db_xref="eggNOG:bactNOG180503"
                     /db_xref="eggNOG:bctoNOG21249"
                     /db_xref="eggNOG:NOG133500"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            1011..2018
                     /locus_tag="Alpa_02"
     CDS             1011..2018
                     /product="unnamed protein product"
                     /protein_id="gnl|USP|Alpa_02"
                     /translation="MAVSYGKNGAGWSPFPGGPVYDSGASSAVTANRGASGGSSSAINGIANNISKISGITSANNAWSAQQAEELRKWQEAQTDKAMKYNSQEAEKNRSWQEYMSSTAHQREIADLKAAGLNPVLSAMGGNGASVTSGATASSSAPSGAMGSTDTSGSSALVNLLGAMLTSTTELSKMSTSALTNLAVADKYNSVNKYLGELSSATQLKGYQISAQTALSTANISAAAQRYVSDNNLKGSLANAAATKIAATIHAEASKYAADKGYLSSENVANINASVNKQLKEMGIKADFDFAQMYPNNLYQMTGATVNNLKGILGDLMSQSAIDSVSSSKGLIKPW"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP2"
                     /inference="similar to AA sequence:INSD:CDL65860.1"
                     /inference="similar to AA sequence:INSD:CDL66940.1"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            2199..3305
                     /locus_tag="Alpa_03"
     CDS             2199..3305
                     /product="unnamed protein product"
                     /protein_id="gnl|USP|Alpa_03"
                     /translation="MPCYQPLWAIPDINPRTGKPYLTKNGKTKYHIFGSEKPLLDDPHLITIPCGKCIGCRLEYSRQWANRCLLEMKEHDSAYFVTLTYNDWHVPISHYIDQTTGEFCDVQTLRKRDYQLFMKRLRKAFPDQQIRFYAAGEYGPKTYRPHYHAILFGLKLDDLEPYGMSDQNYPYYWSKSLQKVWDEGENLQNLYEKVEKKPLQAYQNVLRYIQGCKESITPLTSRGFVLVADVSWETCAYVARYVTKKLTGEVASFYKEHNIEPPFSLMSRKPGIGRGYYDSNLDSLYDYDYINVSTRQGGVKFRPPRYFNRLLETDNPELSEKLREARKNLAKEISRCKLSQTDKRYMNMLDTEEEVKQEAVKTLRRSKL"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP4"
                     /inference="similar to AA sequence:INSD:CDL66943.1"
                     /inference="similar to AA sequence:INSD:CDL65906.1"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            3810..3950
                     /locus_tag="Alpa_04"
     CDS             3810..3950
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_04"
                     /translation="MASLGRIHTFGPYRTMRKAHEVFDIVTKVAPSDATVNIICEEDKNA"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            3907..4446
                     /locus_tag="Alpa_05"
     CDS             3907..4446
                     /product="unnamed protein product"
                     /protein_id="gnl|USP|Alpa_05"
                     /translation="MPLSILSARRIKMPKFANQFEPHARIHTNPGTPEKVLYGPVFDENGTLDLEPKGKENLYDYIQSHKDSCDIKLIVDRCARGDLSALSKAQGMYGDFTTLPRTYAEALQALADAEHFFMRLPVETRAKFDHDPHKFIVSMDKPGFLEKLGVPVPNSGAEQQSPTLTTSAATAPAGEVSTD"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP3"
                     /inference="similar to AA sequence:INSD:CDL65858.1"
                     /inference="similar to AA sequence:INSD:CDL65903.1"
                     /db_xref="InterPro:IPR014131"
                     /note="1 probable transmembrane helix predicted by TMHMM"
ORIGIN
        1 ctaattatcc tgttctttct ttgagtgata ttgttccaac gcctggtact gttccggtta 
       61 agtggaatga tgctaataat gttgtttctg atgcgcagtg gcttttgggt ggtaaaaatt 
      121 ataatggcac tattacgtct aatgatattt ctcttactaa gactaataca ggtcctactt 
      181 attccgctgt tactcctatt aacctttggg ctgttaatga cggctctgtt tcttccgcca 
      241 ccattaacca gttacgccta gccttccaag tccagaagct ctatgaacgt gacgcaagag 
      301 gtggtacacg ctatattgag gttttgaagt ctcactttgg tgtgacctcc ccggatgccc 
      361 gtttgcaacg cccggaatat cttggtggca accgtattcc cattgtcatc agtgagatta 
      421 accagactag cggcacttcc gctaatagca ccccgcaagg taacccttcc ggccagtccc 
      481 ggactaccga tgttcacagt gatttcaaga agtcctttgt agagcatggc tttatcattg 
      541 gcgttatggt tgcccgttat gaccatacct accagcaggg tctagagcgt ttctggtccc 
      601 gtaaaggccg tcttgattat tactggcctg tattcgccaa tattggcgaa caggcggtgt 
      661 taaacaagga gatctatgca cagggcaatg gtactgatga tgaggtattc ggctatcagg 
      721 aagcatgggc tgactatcgt tataagccca atcgtgtaac aggtgagatg cgttctcaag 
      781 ctccccagtc tcttgacgtt tggcaccttg gcgacgatta cagcaagctt ccgtctctgt 
      841 ctgattcgtg ggttcaggaa gattccgctg ttgtcaaccg tgttattgcg gtcagtgagg 
      901 agaacagtaa tcagctttgg gcagatattt ttatcaagaa taagtgtacc cgtgctatgc 
      961 ccatgtacag cattcccggt ctgattgacc atcattaagg aggttgcatt atggccgtat 
     1021 cgtatggtaa gaatggtgcc ggttggagcc ctttccccgg tggtcctgtt tatgatagtg 
     1081 gtgctagtag tgcggttacg gcgaatagag gagccagcgg tggctcctct tccgctatta 
     1141 acggtatcgc taacaatata tctaagattt caggcatcac cagtgctaac aatgcgtgga 
     1201 gcgctcaaca ggccgaggag ctgagaaaat ggcaagaagc ccaaaccgac aaggctatga 
     1261 aatacaattc ccaggaagcg gagaaaaaca ggtcgtggca ggaatacatg tccagcacgg 
     1321 cccatcagag ggaaatagct gatttgaaag ctgctggttt gaatccggta ttaagtgcga 
     1381 tgggtggcaa cggcgcgagt gttaccagtg gtgcgactgc gtcttcctcc gctccaagtg 
     1441 gggcgatggg aagcacggac acttccggga gctctgctct tgtcaatttg ctaggcgcaa 
     1501 tgcttacaag taccaccgaa ctctcgaaga tgtcaacatc ggccttgaca aacctagcgg 
     1561 ttgctgataa gtataatagt gtaaacaagt atcttggtga gcttagttct gctactcagt 
     1621 tgaaaggcta tcagataagc gcacagacgg cccttagtac cgctaatatc tccgccgccg 
     1681 cccaaaggta tgttagcgat aataatctga aaggcagtct tgcaaatgcc gccgcaacta 
     1741 agattgccgc cactatccat gcagaggcta gtaagtatgc cgccgataaa ggctatcttt 
     1801 ctagtgagaa tgtcgctaat atcaatgctt ctgttaataa gcagttgaaa gagatgggta 
     1861 taaaagctga ttttgatttt gcgcagatgt atcccaataa tctttatcaa atgactggtg 
     1921 ctaccgtgaa taatcttaaa ggtatattag gcgatttaat gagtcagtct gctattgatt 
     1981 ctgtatcctc ctctaaaggt ttgattaagc cttggtagtt tttgcactcg tgcccattcc 
     2041 tctcgatata atgggcacga gtgacaccaa agaaagaatg gggcagtaaa tatgtctgag 
     2101 ttagaaaggt tcgttcgttc tttacttaag gttgttgctg ttgtgctctg tctttttgtt 
     2161 gttacgtctc ttttaaggtc ttgtatgtag gtgattagat gccatgttat caacccctct 
     2221 gggctatccc agatatcaac ccccgcacag gtaagcccta cctgacaaag aacggtaaga 
     2281 ccaagtatca tatcttcggc tccgagaaac cgctccttga cgacccccac ttgattacaa 
     2341 ttccctgtgg gaagtgtatt ggatgccgac tggagtattc acgccagtgg gcaaatcgtt 
     2401 gtctgcttga gatgaaagag catgattcag cttactttgt gaccctgact tataatgact 
     2461 ggcatgttcc tatttcccat tatatcgacc aaacgacagg ggagttttgc gatgttcaaa 
     2521 ctctgcggaa gcgtgattac cagttattca tgaaaaggtt gcgaaaagcc ttcccagacc 
     2581 agcaaattcg cttctatgcg gccggagaat atggtccaaa aacgtataga cctcattacc 
     2641 atgctatcct gtttggccta aaattggacg atttagagcc ttatggaatg tccgaccaga 
     2701 actatcctta ctattggtca aaaagtttgc aaaaagtatg ggatgaagga gaaaacttgc 
     2761 aaaatcttta cgaaaaggtt gagaaaaagc ctttacaagc ctaccaaaat gtgctacgat 
     2821 atatacaagg atgcaaggaa agtataactc cccttacatc cagaggattt gtcctagtag 
     2881 ccgatgtatc ttgggaaacc tgtgcatatg tggcccgata tgttacgaaa aagctaactg 
     2941 gtgaggtagc tagtttctac aaagaacaca acattgagcc accttttagt ttaatgtcac 
     3001 gaaaacccgg tattggtaga ggctactatg acagcaattt agacagtttg tatgactacg 
     3061 attatataaa cgtgtctacc agacaaggag gtgtaaagtt caggccgccc cgttatttca 
     3121 atcgtctgtt agagacagac aatcccgaat tatcagagaa gctccgtgaa gcccgtaaaa 
     3181 acctagcgaa agaaatatct cgttgtaagc tctcccagac cgacaagcgt tatatgaaca 
     3241 tgttggatac tgaggaggaa gtaaaacaag aggctgtaaa gacattaagg aggtctaagt 
     3301 tgtgagtaaa catgatggaa tatttaatgc tattttggtt ctttggcgtg aggagttaat 
     3361 aacttcgagt gaatgtgttt cccttatttt gaaaaatcgt aagagaaagg atgagtttgg 
     3421 aaatgcgtaa acgtcaaccc cgagcgaaag acaagcgtta ctttcgtaga accgcatccc 
     3481 aagccaaagc tatcaacatt gaccccaaaa tctatcgagg aggaattaga ctatgatgtt 
     3541 caacatttat gccgtccgtg acgtgaaggt aggtttccag tctatcacca tccagcccaa 
     3601 tgaccccgta gccgctcgct cctttgagag cactgttatc aattccgatt ctgttctgtt 
     3661 cacccatgcc gaggacttct ctttgtaccg tctaggcact tgggacagtg atactggcca 
     3721 tatcatcccc gaggaaatgc ctgtcctgat tctggaagct aagacctgtc tgctaggagg 
     3781 taagaagcat gtttagctat tccgtctgca tggccagtct tggccgtatc catacctttg 
     3841 gcccttatcg tacaatgcgt aaggcccatg aagtatttga tatcgtcact aaggttgctc 
     3901 cgtctgatgc cactgtcaat attatctgcg aggaggataa aaatgcctaa gtttgccaat 
     3961 cagtttgagc cacacgcccg gattcacacc aatccgggca ctcctgaaaa agtcctctat 
     4021 ggtcctgtgt tcgatgagaa tggtactcta gatctagagc ctaaaggcaa ggagaatctg 
     4081 tatgactata tccagtccca caaggattct tgtgatatca agcttattgt agaccgctgt 
     4141 gcccgtggag atttatctgc cctttctaaa gcccagggta tgtacggcga cttcaccacc 
     4201 ctgccccgga cctacgcaga agcccttcaa gcccttgcag atgccgaaca tttctttatg 
     4261 cgcctcccag tcgagacccg tgcaaagttc gaccacgacc cccataaatt catagtcagc 
     4321 atggataaac ccggcttcct tgagaagctt ggagtaccag tccccaatag cggagctgaa 
     4381 caacagtccc cgacgctaac gaccagcgcc gctactgcac ccgctggcga agtttcaacc 
     4441 gattaggttg taaacaatca tccactttaa aaactaaata aaaaatctaa ttctaaatag 
     4501 gagctataat atgaatagga atactaacag tcattttgcg ttaaatccta ctagaataga 
     4561 tatgtcaaga agtacgtttg acagaaacag ttctgtaaaa acaagcttca acgttggtga 
     4621 cattgtccca ttctatgtag atgaggtgtt gcccggtgac acatttgata tcgatacctc 
     4681 taaagttatt cgcatgcctt ccttacttac tccaattatg gataatctgt atcttgatac 
     4741 ctattatttc tttgttccca atcgaattgt ttggcaacat tggaaagagc ttatgggaga 
     4801 gaataacgaa agtgcttgga tacccaccac agagtacgaa gtcccgcaga ttacggctcc 
     4861 ttctggtggt tggagtatcg gtactattgc tgattata 
//
