FEATURES             Location/Qualifiers
     gene            complement(10..711)
                     /locus_tag="Alpa_01"
     CDS             complement(10..711)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_01"
                     /translation="MAHFTGLKELQNRPHKSGHDISAKNCFTAKVGELLPVWTDFAIPNCTYRINLEYFTRTRPVQTSAYTRIREYFDFFAVPCDLIWKSFDSAVIQMGEKAPIQSKDLLTNLTVKGDLPYCSLSDLSFALKFASGNPASLGNKVSVSPGFGNIFGYNRGDVNHKLLSMLDYGNVVDKSANWIGTNANRWWNRRVATADSAVYSQKYNVNLAVNLFFLATYQKIYQDFFRWSQWEKC"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP1"
                     /inference="similar to AA sequence:INSD:WP_004291032.1"
                     /inference="similar to AA sequence:INSD:CDL65742.1"
                     /db_xref="InterPro:IPR003514"
                     /db_xref="InterPro:IPR016184"
                     /GO_component="GO:0019028 - viral capsid"
                     /GO_function="GO:0005198 - structural molecule activity"
                     /db_xref="eggNOG:bacteNOG05989"
                     /db_xref="eggNOG:bactNOG180503"
                     /db_xref="eggNOG:bctoNOG21249"
                     /db_xref="eggNOG:NOG133500"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(722..2422)
                     /locus_tag="Alpa_02"
     CDS             complement(722..2422)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_02"
                     /translation="MINQEVIDKYLLAECLHPVKVLNKYTNDFIYSPCGHCYSCLKNKSNRDTALAMNIASNFKYCYFVWLSYEDQYLPYMELKSIDSLDNNRSNYFFSSVNRNLRILVPNGKDRIIEDPLFEFTHPMTSFEYQDIIVKSHGRYDFLRKCVVYPRFEDCDNRIPYCNTSDCQKFLKRLRFHSKNKYNEEIRFYGVSEYGPRTYRPHWHLLLFFNSDELTSVIQQFVSESWSYGRTTCELSRGGSSSYVASYVNSNVCLPSLYLQHKEIRARSLHSKGYGNNYVFPTQATIHEFDKMYSLLLNGESISFNGKAKQIYPSRSYKHTVFPRFSNLVCKSAHSSAFVFSAAFFTPERLVRYGYLDITYDKSVSPVSQLAHAYTDFFLNREDKRSISFDDELIITTVRLDAPNRKYWHCLTYDQIYSKFYRLFNTVIRTARFWNLFAYVDSCRRGPIYDLMNFSDNYWNEFARRRLSDYFAFLENCNDRQRSFLFHHTALNEVFNSRFVSRFKTVDKGGYELTESFSEFDKRDYMYDSTLSQEFLKELTAINRKACVDKVKHKEFNDLSGLLLNN"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP4"
                     /inference="similar to AA sequence:INSD:WP_008775335.1"
                     /inference="similar to AA sequence:INSD:WP_021963494.1"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(2425..2598)
                     /locus_tag="Alpa_03"
     CDS             complement(2425..2598)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_03"
                     /translation="MENEFVLVSVKPKNSQSQGQIFVVRRKDISSFVETKLSSDNILLIDSIDTFAISSEQ"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(2610..2807)
                     /locus_tag="Alpa_04"
     CDS             complement(2610..2807)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_04"
                     /translation="MKITPQQWIEIVKLISTFIIGVITCLFVQSCTASMSISKYNSNSSQSTEQTSTSSVDSTKISINR"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="protein motif:Phobius:1.01"
                     /note="1 probable transmembrane helix predicted by Phobius with cleavage site between residues  and  "
                     /inference="protein motif:TMHMM:2.0"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(2804..3007)
                     /locus_tag="Alpa_05"
     CDS             complement(2804..3007)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_05"
                     /translation="MYISSIVVVFAPKSPGLEHLSAVSLALDYRVGCTLFHAVEYVSKHPLVKPCLNKYVIASLSFQYSEL"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(3781..4890)
                     /locus_tag="Alpa_06"
     CDS             complement(3781..4890)
                     /product="putative uncharacterized protein"
                     /protein_id="gnl|USP|Alpa_06"
                     /translation="MGLLDFIPVVGDIASSIGNVVSTNKANNANMAVNRMNNEFNAAEAEKARQFQLDMWNKTNEYNSASAQRSRLEEAGLNPYLMMNGGSAGTAQSSGSSTPASASSPLSMQRQDFSGLSNTLASALQISNQTKETNANVQTLQSQKSLYDAQANSILSNVDWWKLGPEYKKWSQMTGLARAGLQFQTDKQNLRNMTWSGNLIQAQHIGALLDNKSKRIINNYLDEGQRLQLDLMAAQYYDAMASGHLKYQQAKSEITKRILMMAEAKGLQINNKAAEDTADGYIKALNAEYSASYDINSPFKYGEDSYVPASVLKSRMDALNSKWQFDKRYWTEGLNALGTVGNAVGSVGNLRKPGARNTYVYGNRTYNRY"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:hypothetical.protein.BACEGG.02723"
                     /inference="similar to AA sequence:MV_prot:putative.VP2"
                     /inference="similar to AA sequence:INSD:WP_021963491.1"
                     /inference="similar to AA sequence:INSD:WP_004291034.1"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(4893..5399)
                     /locus_tag="Alpa_07"
     CDS             complement(4893..5399)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_07"
                     /translation="MRETEKNSCTCFGPGYRKCTPIREVQICPICASSEPDIVLEELPTEPFRFEKVGTEENEAVRVRSDVSMLLHAADMAKKYGTGFVKSMIEMHRPKSSGLQSEMDLMSDAQILDTIKSRHLQSPSELIAWSEYLIDQAKSIEDEASRIALERESAGTPQEPNSSDSQSE"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:hypothetical.protein"
                     /inference="similar to AA sequence:INSD:WP_008775337.1"
                     /inference="similar to AA sequence:INSD:WP_004291033.1"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(5412..6476)
                     /locus_tag="Alpa_08"
     CDS             complement(5412..6476)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_08"
                     /translation="MGILPNSQFGDLAVVDLGTISASGSKIPVGAYDGVNDSGTFKQFQTSSESYNGSSDKTTQIYPRNPDSISVRADSNLWAVLGESSDLKLKFSVLALRQAEALQKWKEITQSVDTNYRDQIKAHFGVSVPQSEAHMAKYIGGVARNLDISEVVNNFLPGPGNDSSQAYIYGKGVGSGQGSMTFNTGSGYYILMCIYHAVPLLDYSISGPDGQNLVTSVEDLPIPEFDNIGMESVPAVELMNSSLYSNVNSADKILGYSPRYYNWKTKIDRIHGAFTTTLKDWVAPIDDSFLYSLFGDSLSTYKGVTWPFFKVNPNTLDDLFAVKVDSTWETDQLLVNCNVGCYVTRPLSADGVPY"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP1"
                     /inference="similar to AA sequence:INSD:WP_008775336.1"
                     /inference="similar to AA sequence:INSD:CDL65742.1"
                     /db_xref="InterPro:IPR003514"
                     /GO_component="GO:0019028 - viral capsid"
                     /GO_function="GO:0005198 - structural molecule activity"
                     /note="1 probable transmembrane helix predicted by TMHMM"
ORIGIN
        1 tgtgtaggat cagcattttt cccattgaga ccaacgaaaa aagtcttgat agatcttttg 
       61 ataagttgca agaaagaata aattaacagc caaattaaca ttatactttt gagaataaac 
      121 agcagaatca gccgtcgcaa ctctcctatt ccaccaacga ttagcattag taccaatcca 
      181 atttgcagac ttatcaacaa cattaccgta atccaacatc gacaacaatt tatgattaac 
      241 atctcctcga ttataaccaa aaatattacc aaatccagga gaaacagata ccttattgcc 
      301 taaactagca ggatttccag aagcaaattt caacgcaaaa ctaaggtcag acaaagaaca 
      361 atagggaagg tctcccttaa cagtaagatt agttaataaa tctttagact gaataggagc 
      421 cttttctccc atttgaatca cagcagaatc aaatgatttc caaataagat cacaaggaac 
      481 cgcaaaaaaa tcaaaatact cacgaatacg agtatacgca gaagtttgta caggacgagt 
      541 acgagtaaaa tactcaagat taattctgta cgtacaatta ggaatcgcaa aatcggtcca 
      601 cacaggcaac aattctccaa cttttgccgt aaagcaattt ttagcagaaa tgtcatgacc 
      661 agatttatga ggtctgttct gcaactcctt aagaccagta aaatgtgcca taataaaaaa 
      721 attaattatt caacaacaaa ccacttaaat cattaaattc cttatgttta accttatcca 
      781 cgcacgcctt ccgattaatg gcggttaatt ctttaaggaa ttcttgagat aaagtggaat 
      841 catacatata atcacgtttg tcaaattcag agaaagattc cgttaattca taaccacctt 
      901 tgtcgacggt tttaaatcta gaaacaaatc gagaattaaa aacctcattt aaagcagtat 
      961 gatgaaacaa aaatgaacgt tgcctatcat tacaattctc caaaaatgcg aagtagtcag 
     1021 aaagacgacg ccgggcaaat tcattccaat aattatcaga aaaattcata agatcataaa 
     1081 taggacctcg gcgacaagaa tctacgtatg caaataaatt ccaaaatcta gcagtgcgaa 
     1141 taaccgtgtt aaaaagtctg taaaatttac tataaatttg atcataagta agacaatgcc 
     1201 aatacttacg attaggagcg tcaagacgaa cagtagtaat tatcagctca tcatcaaaag 
     1261 aaatagatct cttatcttca cggtttaaga aaaaatcagt atacgcatga gcaagttgag 
     1321 atacggggga tacagatttg tcataagtta tgtccaaata tccgtaacga acgagcctct 
     1381 cgggcgtgaa gaacgcagct gaaaatacga aagcactgct atgtgcagat ttgcaaacaa 
     1441 gattcgagaa tctggggaat actgtatgtt tatacgaccg tgaagggtag atttgtttag 
     1501 ctttaccatt aaaagagatg ctttcaccat taaggagaag agagtacatt ttgtcaaatt 
     1561 catgtatcgt ggcttgagtg ggaaagacat aattgtttcc atatcctttt gagtggaggg 
     1621 aacgtgctct aatctccttg tgctggagat ataatgaagg taagcataca ttactattaa 
     1681 catacgacgc aacgtaggaa gaagagcctc ctcgcgatag ttcacaagtt gtacgaccgt 
     1741 aggaccaact ctcagataca aattgctgta taaccgaggt gagttcatcc gagttaaaga 
     1801 ataataacaa atgccaatgc ggacgatatg tccgaggacc atattctgat acaccgtaaa 
     1861 aacgtatttc ttcattatat ttattttttg aatgaaatct tagtctttta agaaatttct 
     1921 gacaatcaga agtattacaa taagggatgc gattatcaca atcttcaaaa cgaggataaa 
     1981 caacacattt acgaagaaag tcataacgac catgactctt aacaataata tcttgatatt 
     2041 caaaagaagt cataggatga gtaaattcaa ataaaggatc ttctataatc ctatcctttc 
     2101 cattaggaac aagaatgcgc aaattcctat taacagaaga gaagaaataa ttagaacgat 
     2161 tattatccaa ggaatctatg gatttaagtt ccatataagg aaggtattga tcttcataag 
     2221 acagccaaac aaaatagcaa tatttaaaat ttgaagcaat attcatagct aatgcggtat 
     2281 cacgatttga cttatttttc aaacacgaat aacaatgacc acaaggggaa tatataaaat 
     2341 cattcgtata cttattcaac accttgacag gatgaagaca ctcagcaaga agatacttat 
     2401 ctatgacttc ctgattaatc ataactattg ttcagaagaa atagcaaatg tatcaataga 
     2461 atcaatcagc aaaatattat ccgaagataa tttcgtctct acaaatgaag agatatcttt 
     2521 ccggcgaaca acaaaaatct gaccttgaga ctgagaattc ttaggcttaa cagaaactag 
     2581 tacaaattca ttttccataa ttgtaaattt taacgattaa tacttatttt agtagaatct 
     2641 acagaagatg tagatgtttg ttcagtagac tgagaactat tactattata cttagaaata 
     2701 gacatagatg cagtacatga ctgtacaaat agacaagtga taacaccaat aataaaagtc 
     2761 gagataagtt taactatctc aatccattgt tgaggagtaa ttttcataac tcagaatatt 
     2821 gaaatgataa actagcaata acgtatttat ttaaacaagg tttaaccaag ggatgcttgg 
     2881 aaacatattc cacagcatga aaaagagtgc agcctactct gtaatcaaga gcaagagaaa 
     2941 cagcagacaa atgctccaaa cctggagatt taggagcaaa aacaacgaca atcgaagaaa 
     3001 tatacataat cacaacattt ttaatattac aaacagtatt atgccacaaa gaaaaagaat 
     3061 atattttaaa aacacaattt tttcagagtt tttttttgag aaaatactgt catttatcta 
     3121 atataaggca agaagtaaga gttttcggcg gagattaacc gaaaaccctt gcgggataaa 
     3181 tgaaataggc tttcgccagt ataaaggttt ttttaggggg tatatagggg gtgaagtgca 
     3241 gaggagtagt aaagggcagc gtgtcactga aacaggataa aggcaaagct gcacccacac 
     3301 ttcgtgcgtg gtgtgcggct ccgccgatat caaggtgcta gacgctaagg gacgttacca 
     3361 cgtccagttt cctgaggtcc gttcaggcca cggaggccac tattcagaga aaaggatatt 
     3421 cggacaatag gggctcctag acttcacata caggcacaaa taagaggcaa aagagtcata 
     3481 gatctccaaa tacattttcg actttaaaaa caaacggcca taatgatcat aaataaattt 
     3541 cttggattta cgattaaaat tagatttagt accgtaataa gtaaatacta cttgaggttt 
     3601 acaaaagccg gtttcgacca aacaataaaa attctttttc ataacatatt gctttttgat 
     3661 tacaatacaa agataaggat aattattata attagctaat cataataatt aataaaagtt 
     3721 aacaaaatgt taaaaaaaaa attccccggg taccccgggg aataagaaat gaaccgacta 
     3781 tcaataacga ttataagtcc tattaccata tacgtaagta ttacgcgcac caggtttacg 
     3841 aagattacct acgctaccaa cagcatttcc aacagtacca agagcgttaa gaccttcagt 
     3901 ccaataacgt ttatcaaact gccacttgga attaagggca tccatacgag acttcaatac 
     3961 agatgccgga acataagaat cctcaccgta tttaaacgga gaattaatat cataggacgc 
     4021 agagtattca gcattaaggg cttttatata accgtcagca gtatcttctg cagctttatt 
     4081 attaatctgc agacctttag cctcggccat cattagaata cgcttagtaa tttcagattt 
     4141 ggcttgctga tattttaaat gaccagaggc catagcatca taatactggg ccgccattaa 
     4201 atccaattga aggcgctgtc cttcgtccag atagttatta ataattcttt tactcttatt 
     4261 atccaacaag gcaccaatat gttgagcctg aatcaaatta ccggaccaag tcatattgcg 
     4321 aagattctgt ttgtcagtct gaaattgtaa tccagcacga gcaagaccag tcatttgaga 
     4381 ccacttctta tactcagggc ctaatttcca ccaatcaaca ttagacaaaa tactatttgc 
     4441 ctgagcatca taaagagatt tctggctctg aagtgtctga acattagcat ttgtttcctt 
     4501 agtctgatta gaaatctgaa gagcagaggc cagagtgttg ctaagacctg aaaagtcctg 
     4561 acgttgcata gacagcggag aagatgcaga tgcaggtgta gaagaccctg aagactgagc 
     4621 ggtaccagcg cttccaccat tcatcattaa atatggattt aaaccagctt cttccaagcg 
     4681 agaacgctga gcagacgcag aattatattc attagtcttg ttccacatat ccagctgaaa 
     4741 ctgccgggcc ttttcagcct cggcagcatt aaactcattg ttcatccgat tgacagccat 
     4801 attcgcatta ttagctttat ttgtagaaac aacattacca atagaagacg ctatatcacc 
     4861 aacaacagga ataaaatcaa gaagtcccat aactattcag attgagagtc agaagaatta 
     4921 ggttcttgag gagtgccagc agactcccgc tcaagagcaa tacgagaagc ttcgtcctca 
     4981 atagatttag cctggtcgat aagatactca ctccacgcaa tcaactcaga aggtgattga 
     5041 agatgacggg atttaatagt atctagaatc tgagcatcag acataagatc catttcagat 
     5101 tgaagaccac tagatttagg acgatgcatc tcaatcatag atttaacaaa tccagttcca 
     5161 tatttcttag ccatatcagc agcatgaagt agcatactaa catcagaacg gacacgaaca 
     5221 gcttcatttt cctcggtgcc gactttttca aaacgaaaag gttcggtagg aagctcttcc 
     5281 aaaacaatat caggctcaga agaggcgcaa ataggacaaa tctgaacctc tcgaataggc 
     5341 gtacattttc ggtaacctgg gccaaaacat gtacaagagt ttttttcagt ttctctcata 
     5401 atcaaaaaat tttaataagg cacaccgtca gcagacaatg ggcgagtaac ataacaacca 
     5461 acattacaat tcactaacaa ttgatccgtt tcccatgtag agtcgacctt gacagcaaaa 
     5521 agatcatcaa gagtattagg gttgacttta aaaaatggcc aagtaacacc cttataggta 
     5581 gataaagaat caccgaacaa agaataaaga aatgaatcat caataggggc aacccaatct 
     5641 ttgagagtag tggtaaatgc accgtgtata cgatcaatct tagttttcca attataatag 
     5701 cgaggactat agcccaaaat cttatccgca gaatttacat tggaatatag actagaattc 
     5761 attaactcaa cagcaggaac tgattccatt ccaatattat caaattcagg aatagggaga 
     5821 tcttcgacag atgtaacaag attttgaccg tcggggccac taattgagta atccaacaga 
     5881 ggaacagcat ggtatataca cataagtata taatagccgg aacctgtatt aaatgtcata 
     5941 gatccttgac cagatccaac acctttacca taaatatatg cctgagaaga gtcatttccg 
     6001 ggacctggaa ggaaattatt aacaacttca gaaatatcaa gattacgggc aacacctcca 
     6061 atatacttag ccatatgagc ctcagattga ggaacgctaa ctccaaaatg agctttaatc 
     6121 tgatcacgat aattagtatc gactgattga gtaatttctt tccatttttg aagagcttca 
     6181 gcttggcgaa gggcaagaac agaaaatttc aattttaaat cagaagattc gcctaataca 
     6241 gcccaaagat tagaatctgc acgaacagaa atagaatcag ggttacgagg gtaaatctgc 
     6301 gtagtcttat cagaagaacc attgtaagat tcagaggaag tctgaaattg tttaaatgta 
     6361 ccagaatcat tgacaccgtc atacgcacca acaggaattt tagaaccaga tgcagaaata 
     6421 gtgccaagat ctactactgc aaggtcgcca aattgagaat tcggaagaat tcccataaat 
     6481 ttatccttat tccaattagc gtagcgaaga gaaaataaat tatctctctt ccaatagtca 
     6541 ctactagcag gaatcgcggc agcaagatcc gaag 
//
