FEATURES             Location/Qualifiers
     gene            complement(147..701)
                     /locus_tag="Alpa_01"
     CDS             complement(147..701)
                     /product="unnamed protein product"
                     /protein_id="gnl|USP|Alpa_01"
                     /translation="MNNIYCENPKVIWHPHASKLVQKYRTFTMPSGTYHGSVLHVNKNHVNKNNIDKYTIVNPVTGETFPMFLIVPCHKCPLCNEKKAQQWSFRALCESYTSNKQAYFITLTYNNEHLPKNGVFPEEIQLFFKRLRTKLDRRGISHNLRYIAVSEYGHWSKRRVHSFGRFFTFSHIFHDIIDTTVNNR"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP4"
                     /inference="similar to AA sequence:INSD:CDL65713.1"
                     /inference="similar to AA sequence:INSD:CDL66976.1"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(867..2018)
                     /locus_tag="Alpa_02"
     CDS             complement(867..2018)
                     /product="unnamed protein product"
                     /protein_id="gnl|USP|Alpa_02"
                     /translation="MADIGKGAASGASLGSAISPGLGTVIGGIGGAAISAIGSFFGNKSNRKLSKEAFERESKFAREERLAQQQWIEQMYEKNNSYNSPAAQMQRLKEAGLNPDLMYSRGDVGNATAPEAPQQAATPRYNVIPANTYGQTAQIAADAGLKAAQARLASSESKKTDTEESLLTADYLLRKARTESDIELNSSTIYVNHELGQLNHAEAEVAAKKLQEIDVAMSEARERISTLKAQQSQIDENLVQMKFDRFLRSKEFELLCKKTYQDMKESNSRLTLNAAEVQDMMATQLARVMNLNASTYMQKKQGLLASEQTMTELYKQTGIDISNQHAKFNFDQAKNWDSTERFTNVATTWINSISCAVGQFTGSASDLKQAGFLSPPRNKAGFR"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="protein motif:Phobius:1.01"
                     /note="1 probable transmembrane helix predicted by Phobius with cleavage site between residues  and  "
                     /inference="protein motif:TMHMM:2.0"
                     /inference="similar to AA sequence:MV_prot:hypothetical.protein.BACPLE"
                     /inference="similar to AA sequence:INSD:CDL65715.1"
                     /inference="similar to AA sequence:INSD:WP_024568108.1"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(2021..2344)
                     /locus_tag="Alpa_03"
     CDS             complement(2021..2344)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_03"
                     /translation="MARNTKPDYKSVECNFDVRKDFERTKPNLGLTPQQVADMAKRGIPVSPMNVNFIDVNGDASWNIEPQFRRDMDMATAWEMEKASQRKALQVLRQKKFGDKYINPQNN"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:hypothetical.protein"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(2620..3744)
                     /locus_tag="Alpa_04"
     CDS             complement(2620..3744)
                     /product="unnamed protein product"
                     /protein_id="gnl|USP|Alpa_04"
                     /translation="MKGGADNTTYSLHQCNWERDFLTTAVPNPQQGANAPLVGLTVGDVVTRADDGTYSIQKQTVLVDEDGSKYGISYKVSEDGESLVGVDYDPVSEKTPVTAINSYAELAALTTTEGSGFTIETLRYVNAYQKFLELNMRKGFSYKQIMQGRWDIDIRFDELLMPEFIGGISRELSMRTVEQTVDQQSTSSQGQYAEALGSKSGIAGVYGSTSNNIEVFCDEESYIIGLLTVTPVPIYTQMLSKDFLYNGLLDHYQPEFDRIGFQPITYKEVCPLNLGVADTVNKANQTFGYQRPWYEYVAKYDSAHGLFRTNMKNFVMSRVFSGLPQLGQQFLLVDPDTVNQVFSVTEYTDKIFGYVKFNATARLPISRVAIPRLD"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP1"
                     /inference="similar to AA sequence:INSD:CDL65712.1"
                     /inference="similar to AA sequence:INSD:WP_024568106.1"
                     /db_xref="InterPro:IPR016184"
                     /db_xref="InterPro:IPR003514"
                     /GO_component="GO:0019028 - viral capsid"
                     /GO_function="GO:0005198 - structural molecule activity"
                     /db_xref="eggNOG:bacteNOG05989"
                     /db_xref="eggNOG:bactNOG180503"
                     /db_xref="eggNOG:bctoNOG21249"
                     /db_xref="eggNOG:NOG133500"
                     /note="1 probable transmembrane helix predicted by TMHMM"
ORIGIN
        1 aggtaagtgt tcattattat aagtaagagt aataaaaata acattgataa atacacgatt 
       61 gttaaccctg ttactggtgt cgtcctactg gtgagtacaa ttctgacgga tcacctgtta 
      121 ctaggtctat tggttttgct tattgtttac ctgttattga cggtggtatc aattatgtca 
      181 tgaaatatat gggaaaacgt gaaaaatctc ccgaaggaat gaaccctacg tttagaccaa 
      241 tgtccgtatt cagagactgc aatatagcga aggttatgag aaataccacg tctatccagt 
      301 ttagtgcgaa ggcgcttgaa gaagagttga atttcttcgg ggaagactcc atttttcggt 
      361 aagtgttcat tattataagt aagagtaata aaataagctt gtttattaga tgtataggat 
      421 tcacagagag cacgaaatga ccattgctgg gctttcttct cattgcacag aggacatttg 
      481 tgacaaggaa caatcagaaa cataggaaat gtttcaccag taacagggtt aacaatcgtg 
      541 tatttatcaa tgttattttt attaacatga tttttattta catggagcac ggaaccgtga 
      601 taggtaccgg acggcattgt aaaggtacgg tacttttgaa ccaatttaga agcgtgagga 
      661 tgccaaatta ctttcgggtt ttcgcaatag atattattca taataaacag ttttagcgga 
      721 cgggagccgc acttagggca aatcgtaact tttccggtgg aaataatcca agattagaag 
      781 gtgtgtcagt tactacatac ttatcgagtt aaggcggtac gattttagaa taaatcgtga 
      841 aaggagcggg gacaccgctc cagtcattat ctaaaaccag ctttattcct tggaggacta 
      901 agaaatccag cctgtttcaa gtcagaagca gagccggtaa actgaccaac tgcacaagat 
      961 atactattaa tccacgtagt agcaacgtta gtgaaccgtt cggttgagtc ccagttttta 
     1021 gcctggtcaa agttgaattt agcatgctga ttcgagatat caataccagt ttgtttatac 
     1081 aactctgtca tagtctgttc actagctaac agaccttgtt tcttttgcat gtacgtagag 
     1141 gcattcagat tcatcacacg agccaattgc gtagccatca tatcttgtac ttcagcagcg 
     1201 ttaagagtaa ggcgagaatt gctctctttc atgtcctgat atgtcttttt acagaggagt 
     1261 tcaaactctt tagagcgtaa aaacctatca aacttcatct gaactaagtt ctcgtctatt 
     1321 tgggactgtt gagctttcaa agtacttata cgttcgcgag cttcggacat agcaacgtct 
     1381 atttcctgaa gtttctttgc agctacttca gcctcggcat gattcaattg tcctagctcg 
     1441 tgatttacgt agatagttga gctgttaagc tcaatgtcac tttccgtacg agctttacgg 
     1501 agcaggtaat cagctgtaag caagctttct tcagtatctg ttttcttact ttcggaagaa 
     1561 gcaagccgag cttgagcagc ttttaatcca gcatcagcag caatttgcgc agtttgtccg 
     1621 taagtattcg caggaatcac attgtatcga ggcgtcgcag cttgctgtgg agcttcggga 
     1681 gcagtcgcat tgcctacgtc gccacgagaa tacatcaagt cgggatttaa tccggcttct 
     1741 ttcaaacgtt gcatttgcgc agcaggcgaa ttgtatgagt tatttttctc atacatttgt 
     1801 tcaatccatt gttgttgtgc aagacgttct tcacgagcaa atttactttc acgctcgaat 
     1861 gcttctttag acaatttgcg gttacttttg tttccaaaaa aactaccaat agcagagatg 
     1921 gcggcaccac cgatgccgcc aattactgta cctagacctg gagaaatagc ggaaccaaga 
     1981 gaagcaccag aagcggcacc ttttccaata tctgccataa tcagttgttt tgagggttaa 
     2041 tgtatttgtc tccaaatttc ttctgacgaa gaacttgaag ggctttgcgt tgggaagcct 
     2101 tttccatttc ccaagcggta gccatgtcca tatcacgacg gaattgaggc tctatattcc 
     2161 aagaagcatc accgttaacg tcaataaaat ttacgttcat cggcgaaaca ggtatgccac 
     2221 gcttcgccat gtctgctact tgttgaggag ttaagcctag attaggtttg gttctctcaa 
     2281 aatcttttcg tacatcaaaa ttacactcaa cagatttgta atccggtttt gtatttctag 
     2341 ccataattgt aaaatttaaa aagtttatat tacgcaacaa agttgctatt aacttgcgtt 
     2401 tcacgcagag ggaaaatact tttccctttt aatcttacga aactgcgaaa ataggtatac 
     2461 gtacgcgaca agttcaatga acctagtact aataattgat taaatattat aacagggttc 
     2521 taatatttaa caattattac tactagaacc cttgaagcaa gtcacgcacg catgcctgaa 
     2581 aaatgcagca tcggaagaaa aaaagaaaaa actattttct taatctagac gaggtattgc 
     2641 aacacgactg attggtaatc gggcggtagc attaaacttg acgtatccga aaatcttatc 
     2701 cgtgtactcc gtaacgctga atacctgatt aaccgtatca gggtctacga gtaaaaattg 
     2761 ttgtccaagt tgaggcaatc cggagaaaac acgtgacatc acgaaatttt tcatgttggt 
     2821 acgaaataaa ccgtgcgcac tatcatattt agcaacatac tcataccacg ggcgttgata 
     2881 tccaaatgtt tgattagctt tattaacagt atcagcaaca ccaagattaa gcggacaaac 
     2941 ttccttatag gtaatcggct ggaatccaat acgatcaaat tcaggctgat aatggtctag 
     3001 caaaccatta tataaaaagt ctttcgacaa catctgtgta taaataggaa caggagtaac 
     3061 agtaagcaaa cctataatat aggattcctc atcacagaaa acctcgatat tattagaagt 
     3121 agaaccataa acaccggcaa ttccgctttt tgagcctaag gcttcggcat attgaccttg 
     3181 tgaagaggta gactgttggt ccactgtctg ttcaacagta cgcattgaca attcacgaga 
     3241 gataccccca ataaattcgg gcataagcaa ttcgtcaaac cgtatatcaa tatcccaacg 
     3301 accttgcata atctgtttat atgaaaaacc tttacgcatg ttaagttcca aaaacttttg 
     3361 ataggcattc acgtaacgaa gggtttcaat tgtgaaacca gagccttcag tagtagtaag 
     3421 ggcagccaac tcagcataag aattaatggc agtcacaggc gttttttcag aaaccgggtc 
     3481 ataatcgaca ccaacaagac tttcaccatc ttcagaaact ttatatgaaa tgccatattt 
     3541 agaaccatcc tcatcgacaa gaactgtttg tttttgaata gagtaagttc catcgtcagc 
     3601 acgagtaaca acatcaccaa cagtaagtcc aactagagga gcgttcgcac cttgttgagg 
     3661 attcggaaca gcagtcgtta aaaagtcacg ttcccaatta cattgatgaa gagagtatgt 
     3721 agtattgtcg gctccacctt tcatactagg gagccattta ttataaacag gacgaccatc 
     3781 aactataaag gggttgttac gtatgtcacg gtaataagca ttataaacag attcataagc 
     3841 acgaaaacga taagcaagta aacgaagatt agcaggtttg ttctgtgtag caaacggagt 
     3901 agtctcataa gtggtttcag attcttcaac aaaggctaca gcggaagcgg tattaagaat 
     3961 ctgtttataa tgcttattac cgtgacatac gtaacaaccc ctttatagtt gatggtcgtc 
     4021 ctgtttataa taaatgactc cctagtatga aaggtggagc cgacaatact acataatgca 
     4081 aggtcgttgg gatattgata tacggtttga 
//
