FEATURES             Location/Qualifiers
     gene            13..474
                     /locus_tag="Alpa_01"
     CDS             13..474
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_01"
                     /translation="MKKKEYIDHIFNGSFDVLHTKVPVQDKLMQLSTFVNKDGSIAISSDISLIFNQQRLENKLTASELREYIQRYTPNKSVYTSQLDDDTLLNTLKSRHIQSLSEMRSWAEYCMENYDSLIKDAEEKARVAAEENAAAEGNAAAGASSSSASSTSE"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:hypothetical.protein"
                     /inference="similar to AA sequence:INSD:WP_004291033.1"
                     /inference="similar to AA sequence:INSD:WP_008775337.1"
                     /note="2 probable transmembrane helices predicted by TMHMM"
     gene            477..1613
                     /locus_tag="Alpa_02"
     CDS             477..1613
                     /product="putative uncharacterized protein"
                     /protein_id="gnl|USP|Alpa_02"
                     /translation="MAFKDFASGLFGGLGSVISGAIGAKTTADTNKTNLKIAQMNNDFNAREAQKARDFQLDMWNKENEYNSASSQRERLENAGYNPYMNEAQAGTATGMSGTSAASAAGAAPQIPYTPDFQSVGVNLASALKMMSEKKKTDIENLNMSDLLRSQIWQNLGATDWRNASPEARAYNLSQGRRAAELGMASLEENLSNQRWSNNLLVANIANSLLDADTKTILNKYLDQQQQAELNVKAANYEYLVMSGQLKRQEVNNLIAEEIETYARANGYNLQNRILRETSDGLIRATNNTNFYFGSYYHSRAFNAGADAFHDSSILRSRAGSASESYKQSAFDTKLQPWREALNSTNMIFNGIGSGLDSYTNFQNGRYYRGNKGRFSNR"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="protein motif:Phobius:1.01"
                     /note="Signal peptide predicted by Phobius with cleavage site between residues 23 and 24 "
                     /inference="similar to AA sequence:MV_prot:hypothetical.protein.BACEGG.02723"
                     /inference="similar to AA sequence:MV_prot:putative.VP2"
                     /inference="similar to AA sequence:INSD:WP_021963491.1"
                     /inference="similar to AA sequence:INSD:WP_004291034.1"
                     /note="2 probable transmembrane helices predicted by TMHMM"
     gene            1873..2058
                     /locus_tag="Alpa_03"
     CDS             1873..2058
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_03"
                     /translation="MIMKTERKFTWCVRFYNVKTGAIDYLMYFDWSARAINEFITDFVDSNKDYVVRAFKQYKKF"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /note="2 probable transmembrane helices predicted by TMHMM"
     gene            2061..2267
                     /locus_tag="Alpa_04"
     CDS             2061..2267
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_04"
                     /translation="MEKKLRFVNVVACSNLGTRIRLTLSSETDDLRQLVADALIRIGQYGSSQETFLVQHIDSAPPLYDMRE"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /note="2 probable transmembrane helices predicted by TMHMM"
     gene            2373..2561
                     /locus_tag="Alpa_05"
     CDS             2373..2561
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_05"
                     /translation="VQPKDGGKPSNPMLVNANGSDLCCLVGEFLCTGDKVLIFQSVTEYKATPCETDPCVESFKKE"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /note="2 probable transmembrane helices predicted by TMHMM"
     gene            2800..4563
                     /locus_tag="Alpa_06"
     CDS             2800..4563
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_06"
                     /translation="MADKVRNFFNRCEHPRIIKNKYTGEPVYVECGSCPHCLISRSDAKRNLCDYEKWNRKYCYFVTLTYNSQYVPKMALVPITDYEFDYPIGKNWPCVKTQLHMRLMLDPRVKKTEMFSQETRMRARRPVGDSLINMFTCKVNKPYIDEHLKAIFDSCAAAVEFRKNYKPTYQSPARPYILRTIPRISKLQKFNDVQREELVWLSPEKVEMLKKKSKCEGDNNAFPQFKGLLKYINYRDYQLFAKRFRKYLFTRIGSYEKISSYVVSEYSPKTFRPHFHILFFFDSDEVAKNIRQAVFQSWKLGRVDTQLARDSAGSYVSGYLNSVVSLPGIFTDVSFTKNKSRFSKLFGYESFRQTIKTPEQAIERLSERILFVRNGKPCEFTPPFSYISRLLPRFVPYSSNFVVETRTVLRSIRGVLQLFRRNEPFKKETPTNISEFVHTYTVTLYEKYGYCYDTLPECLRVYLSYTRSVKEIHYFTDKLKNKLCRPLYIYRIWESLGLSDDCIISLSDEYMSRCRSMSLEKQLSIQQEMFEREGYSDELLSLFYINKPQKKVNNRYFQEWKDKNYYEVHYIRVKHKKLNDENNVFLE"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP4"
                     /inference="similar to AA sequence:INSD:WP_004291031.1"
                     /inference="similar to AA sequence:INSD:WP_008775335.1"
                     /db_xref="eggNOG:bacteNOG07343"
                     /db_xref="eggNOG:bctoNOG24068"
                     /note="2 probable transmembrane helices predicted by TMHMM"
     gene            4578..4781
                     /locus_tag="Alpa_07"
     CDS             4578..4781
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_07"
                     /translation="MKITPQQWIEVVKLISTFIIGLITALCIQSCTASMSVFWKNSNSNQESQQTTRQSVDSTRIDVQPNF"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="protein motif:Phobius:1.01"
                     /note="1 probable transmembrane helix predicted by Phobius with cleavage site between residues  and  "
                     /inference="protein motif:TMHMM:2.0"
                     /inference="similar to AA sequence:MV_prot:hypothetical.protein"
                     /note="1 probable transmembrane helix predicted by TMHMM"
ORIGIN
        1 gccttattga ttatgaaaaa gaaagaatat atagatcata tttttaacgg ttcttttgat 
       61 gtcttgcata caaaagtgcc tgtacaagat aagttaatgc agttgtctac ttttgtaaat 
      121 aaagacggtt ctatcgctat ttctagtgat atttcgttga tatttaatca acaaagattg 
      181 gagaataaat taactgctag tgaattacgt gaatatattc agcgttatac tcctaataag 
      241 tcggtatata cttcccaatt ggatgatgac actttattga atactcttaa atcaagacat 
      301 attcaatcgt tgtctgaaat gcgatcatgg gctgaatatt gtatggaaaa ttatgattca 
      361 ttaattaaag acgctgaaga aaaagcccgt gttgctgctg aagaaaatgc tgctgctgaa 
      421 ggaaatgctg ctgctggtgc ttcttcttct tcagcatctt caacatctga atagttatgg 
      481 catttaaaga ctttgctagc ggattatttg gtggtcttgg ttctgtaatt tctggtgcta 
      541 ttggtgctaa aactacggct gatactaata agaccaatct taagattgcc caaatgaata 
      601 atgattttaa cgctcgtgaa gcacaaaagg cccgtgattt tcagttggat atgtggaata 
      661 aggaaaatga atataattct gcgtcctctc agcgtgagag gctagagaat gctggttata 
      721 atccttatat gaatgaggct caggctggta cggctactgg tatgtctggc acttctgctg 
      781 catctgctgc tggtgctgct cctcaaatcc catatactcc tgattttcaa tctgttggtg 
      841 ttaatttggc ttctgcgttg aaaatgatga gtgaaaagaa aaagactgat attgagaatc 
      901 ttaatatgtc tgatttgcta cgttctcaaa tttggcaaaa tcttggtgcc actgattggc 
      961 gtaatgcgtc tcctgaggcg cgtgcgtata atctttctca aggtcgtagg gctgccgagc 
     1021 ttggcatggc ttccctcgaa gaaaatttgt ctaaccagcg ttggagtaat aatcttcttg 
     1081 tcgctaatat tgcgaattct cttcttgatg ctgatacgaa gactattttg aataagtatc 
     1141 ttgatcaaca acaacaggct gaattaaatg ttaaggcggc taattatgaa tatcttgtta 
     1201 tgtctggtca actgaagagg caagaagtca ataatcttat tgctgaggag attgagactt 
     1261 atgcgcgtgc taatgggtat aatcttcaga atcgtatttt gcgtgagact tcggacggtt 
     1321 tgattcgtgc tactaataat actaattttt attttggctc gtattaccac agtcgagcat 
     1381 ttaatgctgg tgctgatgca tttcatgatt cgtctatatt gcgttctagg gctggttctg 
     1441 cttctgagtc ttacaagcaa tctgcctttg atacgaagtt gcagccgtgg cgtgaggctc 
     1501 ttaattctac taatatgatt tttaacggta ttggttccgg attggattcc tatacaaact 
     1561 ttcaaaatgg ccgttattat cgtggtaata aaggtagatt ctctaataga tagtttgttt 
     1621 tcgttttcgt attgtatatt ttaatattgt cttgatgcac tgacttgtga taagtcggtg 
     1681 cattttattt taatagctgt tctcttttgt gcgctagcaa atcgggtgtc acatctagcc 
     1741 cgattccacc tcttctcgtc cgagattggc aaaagtgaca ccaataaaaa tgcaaaatat 
     1801 gttgtataac atataattta atttggttct ttgtttatat ccctttatct ttgtagtgta 
     1861 ataaaaaaag atatgattat gaaaacagaa agaaaattta cttggtgcgt tcgattttat 
     1921 aatgttaaga caggcgcaat tgactattta atgtattttg actggtcagc tcgtgcaatt 
     1981 aatgaattta ttactgattt cgttgattct aataaagatt atgttgttcg cgcatttaag 
     2041 cagtataaaa aattttgatt atggaaaaga aacttcgatt tgttaatgtt gtggcgtgtt 
     2101 ccaatttagg gacacgtatc cggttaactc tttcttctga gactgacgat cttcgtcaac 
     2161 ttgttgctga tgctcttatc aggattgggc aatatggttc ttctcaggag acatttttgg 
     2221 ttcagcatat agattctgca cctcctttgt acgatatgag agaatagttc cccgcgtgga 
     2281 tttcgcgcgc ttaatcgcgg gtttactttt attatattta tattactaac aatttaaatt 
     2341 ttaattttat gattatgaaa cttttagtga ctgtgcagcc gaaagacggc ggaaaacctt 
     2401 ctaacccaat gttagttaat gctaatggaa gtgatttgtg ttgtcttgtt ggcgagtttc 
     2461 tttgtactgg cgataaagtc ttgatttttc agtctgtaac tgaatataag gctactccct 
     2521 gtgaaacaga cccctgtgta gaatctttta aaaaagaata gtttttcttt ttcttcttct 
     2581 gatattgcat ttcgttgaca aatcgtatag attgcaccaa gcgttattgt attgaaaatt 
     2641 gttaatatcg cgtgtgtgcg aagcttgcgt agcgcgcgcg tgaaattaat aatttttgat 
     2701 acaatgttga ttggtgtttt ctatgcgatt tacctatctt tgcaatttca taagattaaa 
     2761 agtaaaagta ttcgtccctg aatttaaaga cgacggtata tggctgataa agttcgtaat 
     2821 tttttcaatc gttgtgagca tcctcgcata ataaaaaata agtacacggg tgaacctgta 
     2881 tatgttgagt gtggatcttg tccgcactgt ttgatttcgc gttctgatgc gaaaagaaat 
     2941 ttatgtgatt atgaaaaatg gaatcgcaag tattgttact ttgtgacatt gacttataat 
     3001 tcgcagtacg tcccgaaaat ggcacttgtt cctattacgg attatgaatt cgattatcct 
     3061 ataggtaaga attggccttg tgttaagact cagttgcata tgcgtcttat gcttgatcct 
     3121 cgtgtcaaga aaacggaaat gttttctcaa gagactcgta tgcgtgctcg tcgtcctgtt 
     3181 ggtgattctc tgatcaatat gtttacttgt aaagtaaata aaccttacat tgatgaacat 
     3241 ttgaaggcta tattcgattc ttgtgctgct gctgttgagt tccgaaagaa ttataagcct 
     3301 acgtatcagt ctcctgctcg tccttatatt cttcgcacta ttcctcgtat atctaagttg 
     3361 cagaaattta atgatgttca gcgtgaggaa ttggtttggc tttcccctga aaaggttgag 
     3421 atgcttaaaa agaagtcaaa atgtgaagga gataataatg cctttcctca atttaaagga 
     3481 cttcttaaat atataaatta tcgtgattat caactttttg cgaaacgttt tcgcaaatat 
     3541 ttatttacaa gaattggttc atatgaaaaa atatcttcat acgttgtttc ggagtactct 
     3601 cctaagacat tccgcccgca tttccatatc ttatttttct tcgactcgga cgaagtcgcc 
     3661 aaaaatattc gacaagctgt atttcagagt tggaagctcg gtcgtgtcga tacgcaactt 
     3721 gcaagggatt ccgccggtag ctacgtatcg ggctatctta atagcgttgt gtctctcccc 
     3781 ggcattttta cggacgtctc atttacaaaa aataagtcgc ggtttagcaa attatttgga 
     3841 tatgaaagct ttcgacagac aattaagaca cctgaacaag caatcgagcg cctatctgag 
     3901 cgaatactct ttgtccgtaa tggcaagcct tgtgaattca ctcccccctt ttcgtatatc 
     3961 tctagattat tgccacgatt cgtaccgtac agcagtaatt ttgttgtcga aactcgaaca 
     4021 gttctgcgtt caatccgtgg agttttacaa ctctttagac gaaatgaacc ctttaaaaaa 
     4081 gaaactccta caaacatatc cgaatttgtt cacacctata cagtgacatt gtatgaaaag 
     4141 tatggatatt gttatgatac tctccctgag tgtcttcgtg tttatctttc ttatacgcgt 
     4201 tctgttaaag agattcatta tttcactgat aaacttaaga acaaactttg ccgtcccctt 
     4261 tatatatatc gtatttggga atctcttggt ctttctgatg attgcattat ttctttatct 
     4321 gatgaatata tgtctaggtg tcggtctatg tccctagaaa aacaattgag tattcagcag 
     4381 gaaatgttcg agcgtgaagg ttattcggat gaacttttgt ctttgtttta tattaataaa 
     4441 cctcaaaaaa aagttaataa tcgttatttt caggagtgga aagataagaa ttactatgaa 
     4501 gtacattata ttcgcgttaa acataagaaa ttaaatgatg aaaataatgt atttctagaa 
     4561 taattatctt tatagttatg aaaattacac ctcagcagtg gattgaagta gttaaattga 
     4621 tttctacttt tattattggg cttatcacag ctttgtgtat tcagtcttgt actgcgtcta 
     4681 tgtctgtgtt ttggaaaaat agtaattcta atcaagagag tcagcagact acgcgtcagt 
     4741 ctgttgattc tactcgtatt gatgttcaac caaattttta atttatgagt ttattttcgt 
     4801 taaaagacat tcgcaatcat cctagacgtt cggcatttga cctttcgtct aaggttgctt 
     4861 tttctgcaaa atcgggtgaa cttcttccga ttaaatggta ttttacaatg cctggtgata 
     4921 aatttacatt gaaacgtcag cattttactc gtactcagcc tgttaatacc tctgcgtata 
     4981 ctcgtattcg tgagtattat gattggtttt gggttccttt gcaccttctt tggcgcaatg 
     5041 ctcctgaggt tatttctcaa atgcagtcta atgttcagca tgcaggtaca cagactactt 
     5101 cgttaacttt gggtaattat ctgcctacta tttcatctag tcaactcagt gctgtctgtt 
     5161 cacgtttgag tggcaagaca aattattttg gttatgaccg ttccgatctt tcgtataagt 
     5221 taatgcaata tcttcgtgtt ggtaattctg gtcagtcttc tgttaatttt ggaacttctg 
     5281 tacctgtttc ggatacttct tacactcagg cttatcgatt taatcttgat ttgagtatat 
     5341 ttccgttctt ggcatataag aaattttgtc aagactattt tcgttattca cagtggcaag 
     5401 attctagtcc gtatttgtgg aatatagatt attttaccgg caccacttct cacctatttg 
     5461 ctaatttgcc ttctcccacc gatccatatt ggaataataa tacattattt gatcttgagt 
     5521 attgtaactg gaataaagat atcttcatgg gtattcttcc ggatgcacaa ttcggtgatg 
     5581 tgtcatctat tactgttgga aatgttacta atactgttcc tgtttctttg caagggttgt 
     5641 ctaatgcaca agtgcatgta ggttctaaag tctcatcttc ttctgaggaa tataatctgc 
     5701 tagttacgga aggtggttca tctgaccaac ttgtagttaa ttttgccggt cgttcaggat 
     5761 tttcatttga tgttcttgct cttcgtcgtg gtgaggctct tcaacgttgg aaagaaattt 
     5821 ctttgaatgt tcctcagaat tatcgtgctc agattaaagc acattttggt gttgatgttg 
     5881 gtgaaaatat gtcaggtatg tctacttata tcggtggtga ttcatcgtct cttgatatat 
     5941 ctgaggttgt taataccaat cttcagtctg gtaattctca gtctgaggct gttattgctg 
     6001 gtaaaggtgt tggctcttca cagggttctg aaaaatttga ggctcgtgat tggggtgtat 
     6061 tgatgtgtat ttatcataat gttcctttat tggattatgt gtcttcggct cctgacccac 
     6121 aattttttgt tactcagaat acggatttgc ctattcctga acttgattct attggtatgc 
     6181 agtctgtacc ggtttctatg tattctaatt ctgataaaga attggttact ggattttctt 
     6241 ccgccgattt tactatgggt tatttgcctc gttattattc ttggaaaact tcgtatgatt 
     6301 atgtgctagg tgcatttact actactgaga aagaatgggt tgcgcctatt acttccgtta 
     6361 tttggaaacg tatgttgatc ggtttgactt cttcctctgg ttcatttaat tataattttt 
     6421 tcaaggtgaa tccttctata c 
//
