FEATURES             Location/Qualifiers
     gene            1357..1503
                     /locus_tag="Alpa_01"
     CDS             1357..1503
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_01"
                     /translation="VVVILNDNEAEVYLPIAKLLDNRKTVDSSLEGLTTQPIVLTLPTVPVH"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(2013..2210)
                     /locus_tag="Alpa_02"
     CDS             complement(2013..2210)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_02"
                     /translation="MKITPNQWIELVKLISTFIIGVITALTVQSCTASMSVFWKNQNSKQDSQQTTQQEVDSVTIKPQF"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="protein motif:Phobius:1.01"
                     /note="1 probable transmembrane helix predicted by Phobius with cleavage site between residues  and  "
                     /inference="protein motif:TMHMM:2.0"
                     /inference="similar to AA sequence:MV_prot:hypothetical.protein"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(2207..2371)
                     /locus_tag="Alpa_03"
     CDS             complement(2207..2371)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_03"
                     /translation="MYKGVLKFIKRETLHEEFVISIGIFNRPSTAERFRKQLQDVNVGYDVLLILEKL"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:hypothetical.protein"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(2373..2552)
                     /locus_tag="Alpa_04"
     CDS             complement(2373..2552)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_04"
                     /translation="MNKYTFIFEIIWRDPKTGQFKTSEYRKKNQMSIVDARSYARRLVNIQNVLSVRFYKEMC"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(2545..2718)
                     /locus_tag="Alpa_05"
     CDS             complement(2545..2718)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_05"
                     /translation="MEKYIIFYHSAFGYDNVRVDAESFSDAVSIADSISSKFGATIVGVCLEVLLNNWYHE"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(2811..4082)
                     /locus_tag="Alpa_06"
     CDS             complement(2811..4082)
                     /product="unnamed protein product"
                     /protein_id="gnl|USP|Alpa_06"
                     /translation="MPSGTYHGSVLHVNKNHVNKNNIDKYTIVNPATGETFPMFLIVPCNKCALCNEKKAQQWSFRALCESYTSNKQAYFITLTYNNEHLPKNGVFPEEIQLFFKRLRTKLDRRGISHNLRYIAVSEYGHWSKRPHYHIILWNFPDNFESAYSRLTLIESCWRRPTGEYHPDGSPVTRSIGFAYCVPVINGGINYVMKYMGKRECAPEGMNSTFMLASRKNGGIGSAYAEQLRAFYEQQPDTCDMSVINIYTGQPLTTMLPRYYRMKFMPSTSMCYDSNFIKYFKDTVRWFEIARYLHKQYKLPFKFTYPEEYLRLVRMTGKTPYYDPSKTIINDTFIKYYLPQFCSQTVYEDLYYKAFSYGLDCLSTALVFFDSSQVLKHEKSLHMNSLQQAAINARMSMREELNLKKASYDVRVKMNKHYRKEKI"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP4"
                     /inference="similar to AA sequence:INSD:CDL65713.1"
                     /inference="similar to AA sequence:INSD:WP_005867316.1"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(4366..5514)
                     /locus_tag="Alpa_07"
     CDS             complement(4366..5514)
                     /product="unnamed protein product"
                     /protein_id="gnl|USP|Alpa_07"
                     /translation="MPSPAAGAAAGAAAGSVVPGIGTAIGAIGGAAISAIGNWFGNRSNRKASREAFERESKFAREERLAQQQWIEQMYEKNNSYNSPAAQMQRLKDAGLNPDLMYSRGDVGNATAPEAPAQAPTPRYNVIPTNTYGQTAQIAADAGLKAAQARLANSESKKTDTEESLLTADYLLRKARTESDIELNNSTIYVNHELGQLNHAEAEVAAKKLQEIDVAMSEARERISTMKAQQSQIDENMVQLKFDRYLRSKEFELLCKRTYQDMKESNSRINLNAAEVQDMMATQLARVMNLNASTYMQKKQGILASEQTMTELYKQTGIDISNQHAKFNFDQAKNWDSTERFTNVATTWINSVSFAVGQFAGATTSLQKGGFLGKSMSPIGFR"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="protein motif:Phobius:1.01"
                     /note="1 probable transmembrane helix predicted by Phobius with cleavage site between residues  and  "
                     /inference="protein motif:TMHMM:2.0"
                     /inference="similar to AA sequence:MV_prot:hypothetical.protein.BACPLE"
                     /inference="similar to AA sequence:INSD:CDL65715.1"
                     /inference="similar to AA sequence:INSD:WP_024568108.1"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(5517..5840)
                     /locus_tag="Alpa_08"
     CDS             complement(5517..5840)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_08"
                     /translation="MARNTKPDYKCVECNFDVQKDFERTKPNLGLTPQQVAEMAKRGIPVSPMNVNFIDVNGDASWNIEPQFRRDMDMATAWEMEKASQRKALQVLRQKKFGDKYINPQNN"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:hypothetical.protein"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(6116..6310)
                     /locus_tag="Alpa_09"
     CDS             complement(6116..6310)
                     /product="unnamed protein product"
                     /protein_id="gnl|USP|Alpa_09"
                     /translation="MKNFVMHRSFTGLPQLGQQFLLVDPNAVNQVFSVTEYTDKIFGYVKFNATARLPISRVAIPRLD"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP1"
                     /inference="similar to AA sequence:INSD:CDL65712.1"
                     /note="1 probable transmembrane helix predicted by TMHMM"
ORIGIN
        1 tacttagcta catattcata ccacggacgt tgataaccaa acgtccgctc tataaatcca 
       61 gaagaagtcg aattatcagc attcattggg catatttcct tataggtaat aggttgaaaa 
      121 ccaatacgat cgaattccgg ctgatagtgg tctaataaac cattatatgt aaaatcttta 
      181 ggcaacaatt gagtataaat aggcacagga gttacagtta gcaaaccgat aatgtaagat 
      241 tcctcatcac agaatacttc aatattatta gaagtgttac cataaactcc agcgatacca 
      301 gttttagaac cgagagcttc tgcatattgt ccttgagatg aactaccttg ttggtcaacg 
      361 gtttgttcaa cagtacgcat ggacaactcg cgagagatac caccaataaa ttcaggcata 
      421 agaagctcat caaaccggat atcaatatcc caacgacctt gcataatttg tttatacgaa 
      481 aaccctttgc gcatattaag ctctaagaac ttttgatagg cattaacata acgaagagtc 
      541 tcaatagtaa aacctgcact ttgttcagct gcaagagcag ccaattcagc ataggaatta 
      601 atagcagtca caggcgtttt ttccgataca ggatcataat caacaccaac aagacgttca 
      661 ccatcttcag atactctata agaaacacca tatttagagc catcttcatc aacaaggaca 
      721 gtctgttttt gaacagaaag cgtgccatct tcagagcgag taacaacatc tccaatggta 
      781 agaccaacaa gaggagtatt cataccttgt tgaggattcg gtacagcggt ggtcaagaaa 
      841 tcacgttccc aattgcattg atgaagctga tataacgtag agtcagctcc gcctttcatt 
      901 gtcggaagcc atttattgta aacaggacga ccgttaacta caaaaggatt gttgcgtata 
      961 tcacgataat aggcgttgta aacagattca taagcacgaa aacgataagc aagcaattta 
     1021 gggtgttcag cagtatcatt tttttgtgtc cgaaacggat aagtatcata gtcaacttcc 
     1081 gaaagctcgg gatctgcgta aacattaact gactgggcgg taacagcatt agcagcagaa 
     1141 ttcaaactag aattagatat caaaatacac atattacaaa actcagacac agtagaacca 
     1201 atagctccaa gcttttccgc aacattacca agaggaatac ttaacctagc agttttatta 
     1261 tcatcagaca acgcaaattc agaatcaaca taaaacttag tttttaatgc agtgtgatat 
     1321 ataataatac gacaaggcat ttttttaaaa ctagcagtgg tagtcatctt aaacgataat 
     1381 gaagcagaag tatatttgcc tatagccaag ctattagata acagaaaaac cgtagattcc 
     1441 tcattagaag gactaacaac acaaccaata gttttaacac taccgacagt gccggtccac 
     1501 tgagaataaa tatcatccca agataaggaa ggagagacaa aatagaaacc ttcagatgta 
     1561 ctactaccag aaggagtaca atgattaatg gcagaagaag aatagttaga aaaagtagtt 
     1621 ctctgtgttg gaataccaag gtaatcacct aaagtattag ttttaagcat acgttcaaag 
     1681 ccgtgcttat caggcaaaat ataaggttct tccaaatcat cacggaaatt agagatgaaa 
     1741 tcaggatagt cttcccacat agaacgaaga gttaccttaa agaagttaag acgtgcaaac 
     1801 atacgagttt gaacagggaa taccataggc atcagctcaa gaccaaactc tggattaata 
     1861 cgaagagaac ctttcgcggg aacaagctca cagaatacag gagtaatgcg accaaaatta 
     1921 gtagtcaaat tattcacatg agaccaatca aacgaattta catcaatgcg gttattagca 
     1981 tcaaatgtag cgtcaaaaac gttttgtgcc atttaaaatt gcggtttaat agttactgaa 
     2041 tctacctctt gttgggtagt ttgttgagaa tcctgttttg aattttgatt tttccaaaac 
     2101 acagacatag acgcagtaca agactgtact gtaagagcag taatcacacc aataataaat 
     2161 gtggaaataa gctttacaag ctcgatccac tgattaggag taattttcat aatttttcaa 
     2221 gaattagtaa aacatcataa cctacattaa catcctgcaa ttgcttgcga aaacgttcgg 
     2281 cagttgaagg acgattaaat ataccaatac ttataacaaa ctcttcatga agagtttctc 
     2341 ttttaataaa ctttaaaaca cctttataca tatcaacaca tttctttata aaaacgaacg 
     2401 gataaaacat tttggatatt aaccaaacgt cgagcataag aacgagcatc aacaatagac 
     2461 atctgattct tcttgcgata ttcactagtt ttaaactgac cggtcttagg gtcacgccag 
     2521 atgatttcaa aaataaaagt gtacttattc atgataccaa ttatttaata aaacttcaag 
     2581 acatacaccg acaatagtag caccaaattt agagctaata gaatcagcaa tagaaacagc 
     2641 atctgagaaa gattcagcat caacacgaac attgtcataa ccaaaagcag aatgataaaa 
     2701 aataatatac ttttccataa caattaaatt aaattagtat ttctttttct tacactacaa 
     2761 agataggaaa tctattgtta ataaggtgtt aattaatagt taaatctaat ttaaattttc 
     2821 tcttttctat aatgcttatt cattttcaca cgaacatcat aagaagcttt tttaagatta 
     2881 agttcctctc tcatagacat ccgggcatta atagcagctt gttgtaagga attcatatgc 
     2941 aaagattttt catgcttcag aacttgagaa gaatcgaaaa acacaagagc agtagataag 
     3001 caatcaagac catagctaaa ggctttataa tacaaatcct cataaacagt ctgtgaacaa 
     3061 aattgaggaa gataatactt tataaacgta tcatttataa tagttttaga aggatcataa 
     3121 taaggagttt taccagtcat acggacgagt cgaagatatt cttcaggata agtaaattta 
     3181 aacggaagct tgtattgctt atgaagatag cgagcaattt caaaccagcg cacagtgtct 
     3241 ttaaaatact taataaaatt agagtcataa cacattgaag tagaaggcat aaacttcata 
     3301 cgataatagc gaggcagcat agtagtaaga ggttgaccgg tatatatatt gataacggac 
     3361 atgtcgcatg tatcaggttg ttgctcataa aaagcgcgaa gttgttcagc ataggcagaa 
     3421 ccaataccac catttttgcg ggaagcaagc atgaaagtag aattcatacc ttcaggagcg 
     3481 cactcacgtt tacccatgta tttcatgaca taattgatac caccattaat aacagggaca 
     3541 caataagcaa aaccaataga cctagtaaca ggtgatccgt caggatggta ctcaccagta 
     3601 ggacgacgcc agcagctttc aatgagcgta aggcgcgaat atgccgactc gaaattatca 
     3661 gggaaattcc ataatataat atgataatga ggacgtttag accagtgtcc atattcagaa 
     3721 actgcaatat agcgaagatt atgagaaatg ccacgtctat ccaatttggt acgaaggcgc 
     3781 ttaaaaaaga gttgaatctc ttccggaaat actccgtttt tcggtaaatg ttcattgtta 
     3841 taagtaagag ttataaagta ggcttgttta ttagaggtat atgattcaca gagagcacga 
     3901 aacgaccatt gttgagcttt tttttcgtta caaagagcac acttgttgca gggaacaatc 
     3961 aagaacattg gaaatgtttc gccagtagcg ggatttacaa tcgtatattt atcaatattg 
     4021 tttttattga catgattttt gttaacatga agtacagaac catgatatgt accggagggc 
     4081 attgtaaacg tacgatactt ttgtatcagc ttagaagcgt gggggtgcca tattacttta 
     4141 gggtcttcac aatatatatt gttcatattt tcaaaaaaaa tttttccgct tcgcggaaga 
     4201 ttcaatagta aagcggacgg aagccgcact tagggcaaat cgtaactttt ccggcggaaa 
     4261 taaatcactg atttagaagg tgtgtcagtt actacatact tatcgagtta aggcggtacg 
     4321 attttggaaa aaatcgtgaa aagccggggg acacccggct aatcattaac ggaatcctat 
     4381 aggagacata gattttccga ggaaaccacc tttttgcaaa gaagtagtag caccagcaaa 
     4441 ttgaccgaca gcaaacgaaa cggaattaat ccaagttgta gcaacgttag taaaacgctc 
     4501 ggttgaatcc cagtttttag cctgatcaaa attaaattta gcatgctgat tcgagatatc 
     4561 aataccggtt tgcttgtata gctctgtcat agtctgttca ctagccaata taccttgctt 
     4621 cttttgcata taagtagacg cattcagatt cattacacga gccaactgcg tagccatcat 
     4681 gtcttgcact tcagcagcat taaggttaat acgagaattg ctctctttca tatcctgata 
     4741 cgttctctta caaaggagct caaactcctt agaacgcaga tacctatcaa atttcaattg 
     4801 aaccatattc tcatcaatct gtgattgttg agctttcatt gtactaatac gttcacgagc 
     4861 ttcagacata gcaacatcaa tttcctgaag tttctttgca gctacttcag cttcagcatg 
     4921 attcaattgt ccgagttcat gatttacata aatagtagaa ttattcaact caatatcact 
     4981 ttccgtacga gctttacgaa gcagataatc agcagtaagc aaactttctt cagtatccgt 
     5041 tttcttactt tcggaatttg ctaaacgagc ttgcgcagct ttcaatccag catcagcagc 
     5101 aatttgcgca gtctgtccgt aagtattcgt aggtatcaca ttataccgcg gtgtaggagc 
     5161 ttgtgcagga gcttctgggg cggttgcatt tcctacgtca ccacgggagt acatcaagtc 
     5221 cggatttaat ccggcatctt tcaaacgttg catctgggca gcaggtgaat tgtaagagtt 
     5281 atttttctca tacatttgtt caatccattg ctgttgtgcg agacgttctt cacgagcgaa 
     5341 tttactttct cgctcgaagg cttcgcgaga cgctttgcgg ttactcctgt ttccaaacca 
     5401 gttgccaatg gcggagatag cagctccgcc aatagcacca atagcagtac cgatacctgg 
     5461 aacaacagaa ccagcagcag cgccggcggc agcgccagcg gcaggactag gcataatcag 
     5521 ttattttgag gattaatata cttatcacca aatttcttct gacgaagaac ctgaagagct 
     5581 ttacgctggg aggctttttc catttcccaa gcggtagcca tatccatatc acgacggaat 
     5641 tgaggctcta tattccaaga agcatcacca ttaacatcaa taaaattcac attcatagga 
     5701 gaaacgggaa taccacgttt tgccatttca gctacttgtt gaggtgttaa acctaagtta 
     5761 ggtttagttc tttcaaaatc tttttgtaca tcaaaattac attcaacaca tttgtaatca 
     5821 ggttttgtat ttctagccat aagtgtaaaa tttaaaattt atactttacg caataaaatt 
     5881 gcgattgatt tgcgtttcac gcagagggaa aatacttttc ccttttaatc ttacgatatt 
     5941 gcaaaggtag gtatgtgcgc gcgacaagtt caatgaacct agcactaata attgattaaa 
     6001 tattataaca aggttctaat atttaacaat tattactact agaacccttg aagcaagtcg 
     6061 cacacacatg ccttaaagat gcaatgtcgg aagaaaaaaa gaaaaaatta ttttcttagt 
     6121 ctaaccgggg tattgcaaca cggctgattg gtaatcgtgc agtagcatta aacttgacgt 
     6181 aaccgaaaat cttatcggta tattccgtaa cactaaagac ctgattaaca gcattagggt 
     6241 caacaagcaa aaattgctga ccgagttgag gaagtccagt gaatgagcga tgcataacaa 
     6301 aatttttcat atcagtacgg aacaggccgt gtgcattatc atacttagct acatattcat 
     6361 accacggtac g 
//
