FEATURES             Location/Qualifiers
     gene            5..313
                     /locus_tag="Alpa_01"
     CDS             5..313
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_01"
                     /translation="MNTLMLLKHFEKRIVSAQHFKSEDEAIHWWARFPTSDEWEIIYLSERKRSGHRYALTYAKCDERGILYSKYIICFSKKEAVLLARKIKEANSNYITNIKKLY"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:hypothetical.protein"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            495..752
                     /locus_tag="Alpa_02"
     CDS             495..752
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_02"
                     /translation="MIPSITKYGKFRKKEWIKSAKIPFESFSEGSYALMWEGFEWDTGCVVKGFRVVMNCCLFKEAERLENELRKSRVILTKIEATKNI"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            755..1027
                     /locus_tag="Alpa_03"
     CDS             755..1027
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_03"
                     /translation="MDQQEAVKWAYRQDVVKVSCVKEGEEDKFILTVGQYNVTPIVFDTQEQAETFLDTVFKLTNFDLAIIGAMCQRLNELNEQNKSNSKNEEK"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:hypothetical.protein"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            1024..3048
                     /locus_tag="Alpa_04"
     CDS             1024..3048
                     /product="capsid protein VP1"
                     /protein_id="gnl|USP|Alpa_04"
                     /translation="MKVSIGKNTLGGGKKMMTRLNNYNRSTHDLSFVMRTSMAPGVLVPTLKMLMLPGDTFPVKTRCHTLTHPTVGPLFGSFKQQNDFFFCPIRLYNAMLHNNALNIGLDMKKVKLPIVRIIASDLDLTKKMKGSNGTLKKMIHPSSLVKTLGLSNLEKNNSQQWDWNAIPILAYFDIFKNYYANKQEKSFYTIAGAQSLNTLNNPSSGDGIYFAAFDVSASGDTIINQIIQNPTADPMVIQGNKVGFVIKNTEVYSLSNIILSGTIELTPTGEGRTINLTGQSIAELIGSGVLEEINTKKGYNANSQRAFAFKTMNGETATKSIEIAQKFHFFSISGNYSKYDLTAIDDSREAILAAGRNQYVCEEPYIKDIFTPVVDSEDISGRHIPNCAYPMVGLALKTYQSDVNTNWVNTEWLDGDSGINSITAIDTSGGSFTLDTLNLAKKVYTMLNRIAISDGSYNAWIQTVYTSGGLNHIETPIYLGGSSLEIEFQEVVNNSGTEDQPLGTLAGRGVATNHKGGNIVFKADEPGYLFCITSITPRVDYFQGNEWDMYLESLDDLHKPQLDGIGFQDRLYKHINANTDSTEFNKTVGKQPAWIEYMTNVNKTYGNFALVENEGWMCLNRIFGDINTYTTYIFPHLYNNIFADTDVTSQNFWVQIAFNTNPRRVMSAKVIPNL"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP1"
                     /inference="similar to AA sequence:INSD:WP_022322420.1"
                     /inference="similar to AA sequence:INSD:KDS63784.1"
                     /db_xref="InterPro:IPR003514"
                     /GO_component="GO:0019028 - viral capsid"
                     /GO_function="GO:0005198 - structural molecule activity"
                     /db_xref="eggNOG:bacteNOG05989"
                     /db_xref="eggNOG:bactNOG180503"
                     /db_xref="eggNOG:bctoNOG21249"
                     /db_xref="eggNOG:NOG133500"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            3060..3395
                     /locus_tag="Alpa_05"
     CDS             3060..3395
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_05"
                     /translation="MIKPKFFPKPPETNYEFQDGESIENKVRRITENNEPITDGAPIIYTNRDDGVLPAYNIRTDRWEVAQAAMDAVNQANLAKSKNYGKIEQQEQNALESKEIGDTPSQQDSVG"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP2"
                     /inference="similar to AA sequence:MV_prot:hypothetical.protein"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            3544..4677
                     /locus_tag="Alpa_06"
     CDS             3544..4677
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_06"
                     /translation="MGFKESFISGLGSTAASSGIGFIGNALSKVFGLSWSPQKAMEEQWKYNKKIMALQNQYQQQAAAQSQQYAKDYWDYTNAENQVEHLKNAGLNIGLMYGQSGAGGMGASGGAHQASPEQPQGNPVGMALQVQQIEQQRRMNDAQIALAEAQASKANEEAKKISGVDTQEALKRIEAIASQIELNLKEGQYKEALTDLTKAEKEATEALTSLREMQEGLTKAQISEAFAIAEYYSEKAHTEYWVKENEKIQNEYLKDTYNDRVDAADYNNAVAIALAAKYTSEKDVNEKQIKQLEASINELNALAEKHNWDKETYRKQVEGMIERWEEQTFNERIGLGLEFGENIVNLLYKGRKRRGSTRTRSTREGKTVTTETYTESY"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:hypothetical.protein"
                     /inference="similar to AA sequence:MV_prot:putative.VP2"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            4844..5812
                     /locus_tag="Alpa_07"
     CDS             4844..5812
                     /product="putative replication initiation protein"
                     /protein_id="gnl|USP|Alpa_07"
                     /translation="LEEELHSSFGYFTTLTISPEGIKEIEEKTGLKWEENPNEIATKGLRLFLERVRKETGKSIKHWCVTELGEKKDRIHLHGIFFGQKSAELIRKHWKYGFVFIGGYCNSRSVNYITKYMLKVDIKHPEFKQIVLASAGIGAGYMDRLDYLWQKQNYKNINVATYTFRNGTKMAMPKYYKNKIFTEKEREKMWINNLNRGLIWIYGEKVKADDWKTIDNLRAYWQKYGCEVMGDNPIAWNAMKERRKEEKQRRAVALAKKQAEKFSTENLIEELPLQADFPMQEEKQEWDKLIEKYIQSNYWLFERVRRCATSELFDALGVMEQA"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP4"
                     /inference="similar to AA sequence:INSD:WP_022044634.1"
                     /inference="similar to AA sequence:INSD:KDS68909.1"
                     /note="1 probable transmembrane helix predicted by TMHMM"
ORIGIN
        1 ggttatgaac acactcatgt tactaaaaca tttcgaaaag agaatagtct ccgcgcaaca 
       61 cttcaaaagc gaagacgaag ccattcattg gtgggctcgc tttcctacct cggacgaatg 
      121 ggaaattatt tatctaagcg agagaaaacg aagcggacac agatatgccc taacatatgc 
      181 aaagtgtgac gaaagaggta tcctatattc taaatacatt atttgctttt ctaaaaaaga 
      241 agctgtactt ttagcaagga aaattaaaga agcaaactca aactatataa ccaacattaa 
      301 aaaactttat taaatgaaag acgagatcaa acaattctta aaagaaaact ggaaaacagc 
      361 agcaagcatt ataggtgcag ctatattatt aataatagcc tatatatttg aaggctgcgg 
      421 tagtacttgg cgagtatcag gaaatacagt aaatgtaaat aacaaatgtc taaatgattc 
      481 aattacacat cacaatgata ccatcaatca cgaaatacgg caaattccgt aaaaaagaat 
      541 ggataaagag cgctaaaata ccattcgagt catttagtga aggaagttat gctcttatgt 
      601 gggagggttt tgaatgggat actgggtgcg tggtaaaagg atttagagtt gttatgaact 
      661 gctgtctctt taaagaagca gaacgactgg aaaatgaatt acgtaaaagt agagttatat 
      721 taacaaaaat tgaagcaact aaaaacattt aattatggat caacaagaag cagtaaaatg 
      781 ggcttatcgc caagatgtag taaaagtatc ctgtgttaaa gaaggtgaag aagataaatt 
      841 tattctcacc gtagggcaat ataatgtaac acctatcgta ttcgacacac aagaacaagc 
      901 agaaactttt ttagatacag tattcaaact cacaaatttc gatctggcca taataggagc 
      961 aatgtgccaa agattaaacg agcttaatga acaaaataaa tcaaactcta aaaacgaaga 
     1021 aaaatgaaag taagtattgg aaaaaacacc ctcggaggtg gtaaaaaaat gatgacacgg 
     1081 ttgaacaatt acaaccgtag tactcacgat ttaagttttg taatgagaac atctatggct 
     1141 ccaggtgttt tggtgccaac attaaaaatg ctaatgttac ctggtgacac attccccgtc 
     1201 aaaaccagat gtcatacatt aacacaccca actgttggac ctttattcgg aagctttaaa 
     1261 caacaaaatg atttcttctt ctgtcctata agactataca atgccatgct gcataataat 
     1321 gcattaaata taggattaga tatgaaaaaa gtcaaactac caatagtaag aattatagcc 
     1381 tctgatctgg acttaacaaa aaaaatgaag ggatctaacg gaactttaaa aaaaatgata 
     1441 caccctagtt ctcttgtcaa aaccttaggt ttatcaaact tagagaaaaa taattctcaa 
     1501 caatgggatt ggaatgcaat accaatattg gcttatttcg acatctttaa aaattactat 
     1561 gcaaataagc aagaaaaatc attttataca attgcaggag cacaaagctt aaatacctta 
     1621 aataatccat catcaggaga tggaatttat ttcgcagcgt tcgacgtatc agcctctggg 
     1681 gatactatta taaatcaaat aatacagaac ccaacagcag accctatggt tatacaagga 
     1741 aataaggtag gatttgttat caaaaatacc gaagtttata gcctttcaaa tatcatattg 
     1801 tcgggtacaa tagaacttac tccgacagga gagggaagaa ctataaatct aacaggacaa 
     1861 tccattgccg aactaatagg ttcaggggta ttagaagaaa ttaacacaaa aaaaggatac 
     1921 aatgcaaata gtcaacgagc attcgcattc aaaacaatga atggagaaac agccacaaaa 
     1981 agtatagaaa tagcccaaaa attccatttt ttctcaataa gtggaaatta ttcgaaatac 
     2041 gatttaacag ccatagacga tagtagagaa gcaatattag cagcaggtag aaatcaatac 
     2101 gtatgtgaag aaccttatat aaaagatata tttacaccgg tagtagatag cgaagatata 
     2161 agtggaagac atataccaaa ctgtgcatat cctatggtag gactcgccct taaaacatat 
     2221 cagagtgatg ttaatacaaa ctgggttaat accgaatggc tcgacgggga ttcaggaatc 
     2281 aactctataa ccgctattga tacatcggga ggaagcttta cgctcgacac tcttaacctt 
     2341 gcaaaaaaag tatataccat gctcaataga attgccatat cagatggaag ttataatgca 
     2401 tggattcaaa ccgtatacac aagtggaggg ttaaatcata ttgaaactcc tatttactta 
     2461 ggaggaagct ctctcgaaat agaattccaa gaagtagtca acaatagcgg aacagaagac 
     2521 cagccattag gaacactagc tggtagagga gttgcaacta atcataaagg aggaaatatt 
     2581 gtattcaaag ctgatgaacc tggatattta ttttgtatta cctctattac cccacgagta 
     2641 gattatttcc aagggaatga atgggatatg tatttagaat ccttagatga tctgcacaaa 
     2701 cctcaactcg acggaatagg attccaagat aggctatata aacatataaa tgcaaacacc 
     2761 gattccacgg agttcaacaa gacagtagga aaacaaccgg catggataga atacatgaca 
     2821 aatgtaaaca aaacatatgg taatttcgca cttgtcgaga acgaggggtg gatgtgtctc 
     2881 aatagaatat tcggagatat aaatacttat acaacctata tatttcctca tttgtataac 
     2941 aatatatttg cagacacaga tgttacctca caaaactttt gggtacaaat tgcatttaat 
     3001 accaatccaa gacgtgtcat gtcagcgaaa gtaattccta atctttaaat tatacaatta 
     3061 tgatcaaacc aaaattcttt ccaaaacctc ctgaaacaaa ttacgaattt caagatggag 
     3121 aaagtatcga aaacaaggtt cgtagaatca ctgaaaacaa tgaacctatc acagatggag 
     3181 caccaattat ctataccaat agagatgacg gagtattacc ggcttacaat atcagaacag 
     3241 atagatggga ggtagcacag gcagctatgg acgcagttaa tcaggccaat ctagccaaat 
     3301 caaaaaacta cggaaaaata gaacaacagg aacaaaatgc cctcgaatca aaggagattg 
     3361 gagatactcc ttcgcagcag gattcggtgg gataaaccac acatctaaaa ggctgggaga 
     3421 caggagcttg gctccttctc cctccatttt tcgcaaaatg gtacgcatgt agcatatatt 
     3481 atctagtaat atgtataacc cttgtaaaat tacaagggcg aaaaattaaa caaataaaac 
     3541 aatatgggat tcaaagaatc atttataagc ggattaggat ccacagcagc aagttctggc 
     3601 ataggattca tcggaaatgc cttaagtaaa gtattcggat taagttggtc accgcaaaaa 
     3661 gctatggaag aacaatggaa atacaataaa aaaatcatgg ctttacaaaa ccaatatcaa 
     3721 caacaagcag ccgcacagtc tcaacaatac gcaaaagatt attgggacta taccaatgca 
     3781 gaaaatcaag tagaacatct gaaaaatgca ggattaaata tcggcctaat gtacgggcaa 
     3841 agcggagccg gcggtatggg agccagcgga ggagcacacc aagcaagtcc agaacagccg 
     3901 caaggaaacc cggtaggaat ggctttacaa gttcaacaaa tcgaacagca acgaagaatg 
     3961 aatgacgcac aaatagcact agcagaagca caagcaagta aagctaacga agaagcaaag 
     4021 aaaatttcag gcgtagatac gcaagaagcc ttaaaacgga tcgaagcaat tgcctctcaa 
     4081 atagaactta atttaaaaga aggccagtac aaagaagctc taaccgattt aacaaaagca 
     4141 gaaaaagaag ctaccgaagc attaacaagc cttagagaaa tgcaagaagg tttaacaaag 
     4201 gcacaaataa gcgaagcctt tgccatagcc gaatattata gcgaaaaagc acacacagaa 
     4261 tattgggtaa aagaaaatga aaaaattcaa aacgaatatt taaaagacac ttataacgat 
     4321 agagtcgacg cagcagatta taacaatgca gttgccattg ctttagctgc aaaatataca 
     4381 agcgaaaaag atgtcaatga aaaacaaatc aaacagcttg aagcaagtat caacgaatta 
     4441 aatgctctcg cagaaaaaca taattgggat aaagaaacat atcgcaaaca agtcgaaggc 
     4501 atgattgaaa gatgggaaga acaaaccttt aacgaaagaa tcggactagg gttagaattt 
     4561 ggggaaaata ttgtaaactt gctatataaa ggacgtaaaa gaagaggcag tacaagaacc 
     4621 agatcaacaa gagaagggaa aaccgtaaca acagaaactt atacagaatc ttattaatat 
     4681 gtgtttatat cctacttttg taaaaaatcc gaaatacaaa cctaataaaa aaaataaggg 
     4741 aaaacctcct gtctgtaaag ataggaggct cctttatata cctacaaaat gtggctgctg 
     4801 tatagaatgt cgaaaagaaa aacaaaggga atggagggtc agattggaag aagagttaca 
     4861 ttcaagtttt ggatatttta ctacattaac aataagcccg gaaggtataa aagaaatcga 
     4921 agaaaagacc ggcttaaaat gggaagaaaa cccgaacgaa atagcaacaa aaggattaag 
     4981 actatttctg gaaagagtaa gaaaagaaac cggaaaaagt ataaaacatt ggtgcgttac 
     5041 cgaactgggc gaaaaaaaag acagaataca tttgcacggt atcttcttcg gtcaaaaatc 
     5101 ggccgaactt ataagaaaac attggaaata cgggtttgta tttatcggag ggtattgtaa 
     5161 tagcagaagt gtcaactaca taacaaaata tatgctgaaa gtagacatta aacacccaga 
     5221 attcaaacaa attgtattag ccagtgcagg aattggagca ggatacatgg acagactaga 
     5281 ctatctatgg caaaaacaaa actacaaaaa tatcaacgta gccacctata cattcagaaa 
     5341 tggtacaaaa atggctatgc ctaaatatta taaaaacaaa atattcacag agaaagaacg 
     5401 tgaaaaaatg tggattaata accttaatag aggactaata tggatctatg gagaaaaagt 
     5461 aaaagccgat gattggaaaa ccatcgataa ccttagagca tattggcaaa aatatggatg 
     5521 tgaagtaatg ggagacaatc ctatcgcctg gaatgccatg aaagaacgga gaaaagaaga 
     5581 gaaacaacga cgagctgtcg cactagctaa aaaacaagct gaaaaattca gcacggaaaa 
     5641 tctaattgaa gaattgccgt tacaggccga ttttcctatg caggaagaaa aacaagaatg 
     5701 ggataaactc atagaaaaat atatacaatc taactattgg ttatttgaac gagtaagaag 
     5761 gtgcgcgacg tcggagcttt ttgacgcctt gggtgtaatg gagcaagcgt gaaatagtat 
     5821 cagacaataa tttagacagt atttttttaa tgtttaaggc ggaaagtcct gcgtcctttc 
     5881 cttggtcgct tcgctcctgt tggtacgctc gctacggcgg agcctactcg ctgtaagcct 
     5941 tgcaggcttg cgcgcaatac tatcagcgag tgttaaagac ggtaattata tatgttaaaa 
     6001 ggggataatt acttgcaaaa ggggataatt aatattacct ttgttatata attaaaaaac 
     6061 gcaaggttat gaacacactc atgttactaa aacatttcga aaagagaata gtctccgcgc 
     6121 aacacttcaa aagcgaagac gaagccattc attggtgggc tcgctttcct acctcggacg 
     6181 aatgggaaat tatttatcta agcgagagaa aacgaagcgg acacagatat gccctaacat 
     6241 atgcaaattc gacgaacaag gaaaattgta ttcaaagtat attatttgct tttctaaaaa 
     6301 agaagctgta cttt 
//
