bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: all_orgs
14,240,465 sequences; 5,121,972,263 total letters
Query= Contig-12_CDS_annotation_glimmer3.pl_2_2
Length=56
Score E
Sequences producing significant alignments: (Bits) Value
mgl:MGL_2653 hypothetical protein 32.3 6.0
> mgl:MGL_2653 hypothetical protein
Length=822
Score = 32.3 bits (72), Expect = 6.0, Method: Composition-based stats.
Identities = 11/20 (55%), Positives = 18/20 (90%), Gaps = 0/20 (0%)
Query 9 CISEIRNLLRSIDRSFVPNH 28
C+S+IR++L+ +DR +VPNH
Sbjct 161 CMSKIRDVLKYVDRVYVPNH 180
Lambda K H a alpha
0.326 0.138 0.397 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 127142967006