bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: all_orgs
14,240,465 sequences; 5,121,972,263 total letters
Query= Contig-12_CDS_annotation_glimmer3.pl_2_4
Length=144
Score E
Sequences producing significant alignments: (Bits) Value
smub:IM46_343 PaaD-like protein (DUF59) involved in Fe-S clust... 38.9 0.039
smh:DMIN_186 putative metal-sulfur cluster biosynthetic protein 38.9 0.039
smg:SMGWSS_190 hypothetical protein 38.5 0.062
nhe:NECHADRAFT_92539 hypothetical protein 36.6 1.4
sauu:SA957_1323 hypothetical protein 35.0 2.2
saus:SA40_1308 hypothetical protein 35.0 2.2
suu:M013TW_1380 ribonuclease HI 35.0 2.2
obr:102706157 putative protein TPRXL-like 35.4 2.8
pmul:DR93_437 hypothetical protein 33.9 3.4
pmp:Pmu_18560 hypothetical protein 33.9 3.4
pul:NT08PM_1924 hypothetical protein 33.9 3.4
pmv:PMCN06_1853 hypothetical protein 33.9 3.4
pmu:PM1588 hypothetical protein 33.9 3.4
chx:102174902 LAMB4; laminin, beta 4 34.7
xce:Xcel_1224 HipA N-terminal domain-containing protein 34.7 5.9
ola:101154987 centrosome and spindle pole associated protein 1... 34.3 7.8
> smub:IM46_343 PaaD-like protein (DUF59) involved in Fe-S cluster
assembly
Length=104
Score = 38.9 bits (89), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 36/74 (49%), Gaps = 4/74 (5%)
Query 32 DIYLLHHIGDLNISNNLADAIKSRLQS----VSDFMPDDLRQSFDKLDDFQKMEVTDSRY 87
DIY L I D+ ISNN I L + V++ +P ++ + + Q +E+ + Y
Sbjct 29 DIYELGFIYDIRISNNFFIKIIMTLTTPNCPVAEILPLKVKNKILNIKNVQNVEIILTFY 88
Query 88 AQWVSDKVSRTKQF 101
W SD +S + +
Sbjct 89 PNWTSDMISSLRLY 102
> smh:DMIN_186 putative metal-sulfur cluster biosynthetic protein
Length=104
Score = 38.9 bits (89), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 36/74 (49%), Gaps = 4/74 (5%)
Query 32 DIYLLHHIGDLNISNNLADAIKSRLQS----VSDFMPDDLRQSFDKLDDFQKMEVTDSRY 87
DIY L I D+ ISNN I L + V++ +P ++ + + Q +E+ + Y
Sbjct 29 DIYELGFIYDIRISNNFFIKIIMTLTTPNCPVAEILPLKVKNKILNIKNVQNVEIILTFY 88
Query 88 AQWVSDKVSRTKQF 101
W SD +S + +
Sbjct 89 PNWTSDMISSLRLY 102
> smg:SMGWSS_190 hypothetical protein
Length=105
Score = 38.5 bits (88), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (49%), Gaps = 4/72 (6%)
Query 29 LHSDIYLLHHIGDLNISNNLADAIKSRLQS----VSDFMPDDLRQSFDKLDDFQKMEVTD 84
+ DIY L I D+ ISNN I L + V++ +P ++ + + Q +E+
Sbjct 26 ISVDIYELGFIYDIRISNNFFIKIIMTLTTPNCPVAEILPLKVKNKIFNIKNVQNVEIIL 85
Query 85 SRYAQWVSDKVS 96
+ Y W SD +S
Sbjct 86 TFYPNWTSDMIS 97
> nhe:NECHADRAFT_92539 hypothetical protein
Length=1334
Score = 36.6 bits (83), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/148 (28%), Positives = 70/148 (47%), Gaps = 35/148 (24%)
Query 16 DLQHTKVSDDCTKLHSDIYLLHHIGDLNISNNLAD----------AIKSRLQS------- 58
+L+ K +D+ LH I LL H+G+++ISNNLA+ ++S L S
Sbjct 798 ELKEQKCADE---LHRTIALLSHLGEVHISNNLANYADDAHMKAMLMQSHLDSAAVSFNT 854
Query 59 ----VSDFMP-----DDLRQSFDKLDDFQKMEVTDSRYAQWVSDKVSRTKQFMKEYDTAL 109
V+ +P ++L Q F K + +T +R A+ ++ K R Q ++ +L
Sbjct 855 LRNLVNRVVPAEGEEEELAQHFAKKSEAV---ITQTRGAKVIAGKAVRALQDLRTR--SL 909
Query 110 SKLKDSEET-EKLKVAQKNLRDFILRLG 136
S L D+ E E+ A + L D ++G
Sbjct 910 SLLPDTTEAFEQCCEATQELADLARQIG 937
> sauu:SA957_1323 hypothetical protein
Length=133
Score = 35.0 bits (79), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/97 (29%), Positives = 45/97 (46%), Gaps = 21/97 (22%)
Query 3 DNEFLSYIPPIGEDLQHTKVSDDCTKLHSDIYLLHHIGDLNISNNL--------ADAIKS 54
D + +YI +GE HT C IY L H +LN+SN L AD+I++
Sbjct 26 DEQHYTYIHELGEMDNHTAEWAAC------IYALEHARELNVSNALLYTDSKLIADSIEA 79
Query 55 RLQSVSDFMPDDLRQSFDKLDDFQKMEVTDSRYAQWV 91
++F P FD+++ F+K D + +W+
Sbjct 80 GYVKNANFKP-----YFDQIEIFEKS--FDLLFVKWI 109
> saus:SA40_1308 hypothetical protein
Length=133
Score = 35.0 bits (79), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/97 (29%), Positives = 45/97 (46%), Gaps = 21/97 (22%)
Query 3 DNEFLSYIPPIGEDLQHTKVSDDCTKLHSDIYLLHHIGDLNISNNL--------ADAIKS 54
D + +YI +GE HT C IY L H +LN+SN L AD+I++
Sbjct 26 DEQHYTYIHELGEMDNHTAEWAAC------IYALEHARELNVSNALLYTDSKLIADSIEA 79
Query 55 RLQSVSDFMPDDLRQSFDKLDDFQKMEVTDSRYAQWV 91
++F P FD+++ F+K D + +W+
Sbjct 80 GYVKNANFKP-----YFDQIEIFEKS--FDLLFVKWI 109
> suu:M013TW_1380 ribonuclease HI
Length=133
Score = 35.0 bits (79), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/97 (29%), Positives = 45/97 (46%), Gaps = 21/97 (22%)
Query 3 DNEFLSYIPPIGEDLQHTKVSDDCTKLHSDIYLLHHIGDLNISNNL--------ADAIKS 54
D + +YI +GE HT C IY L H +LN+SN L AD+I++
Sbjct 26 DEQHYTYIHELGEMDNHTAEWAAC------IYALEHARELNVSNALLYTDSKLIADSIEA 79
Query 55 RLQSVSDFMPDDLRQSFDKLDDFQKMEVTDSRYAQWV 91
++F P FD+++ F+K D + +W+
Sbjct 80 GYVKNANFKP-----YFDQIEIFEKS--FDLLFVKWI 109
> obr:102706157 putative protein TPRXL-like
Length=350
Score = 35.4 bits (80), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/49 (33%), Positives = 27/49 (55%), Gaps = 0/49 (0%)
Query 49 ADAIKSRLQSVSDFMPDDLRQSFDKLDDFQKMEVTDSRYAQWVSDKVSR 97
A I+SR++ V D +PDDL +S + + R QW++D+ S+
Sbjct 211 AGPIRSRIEEVQDRLPDDLIESIAPAGYIESHRLPVLRAHQWITDRASQ 259
> pmul:DR93_437 hypothetical protein
Length=103
Score = 33.9 bits (76), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (51%), Gaps = 1/57 (2%)
Query 4 NEFLSYIPPIGEDLQHTKVSDDCTKLHSDIYLLHHIGDLNISNNLADAIKSRLQSVS 60
N L+ +PPI EDL + D T++H + +G L + N LA+A RL S
Sbjct 4 NTLLNTLPPI-EDLVGLAIMDGETQIHYIPAIAGKLGSLRVYNALAEAFHGRLDRTS 59
> pmp:Pmu_18560 hypothetical protein
Length=103
Score = 33.9 bits (76), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (51%), Gaps = 1/57 (2%)
Query 4 NEFLSYIPPIGEDLQHTKVSDDCTKLHSDIYLLHHIGDLNISNNLADAIKSRLQSVS 60
N L+ +PPI EDL + D T++H + +G L + N LA+A RL S
Sbjct 4 NTLLNTLPPI-EDLVGLAIMDGETQIHYIPAIAGKLGSLRVYNALAEAFHGRLDRTS 59
> pul:NT08PM_1924 hypothetical protein
Length=103
Score = 33.9 bits (76), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (51%), Gaps = 1/57 (2%)
Query 4 NEFLSYIPPIGEDLQHTKVSDDCTKLHSDIYLLHHIGDLNISNNLADAIKSRLQSVS 60
N L+ +PPI EDL + D T++H + +G L + N LA+A RL S
Sbjct 4 NTLLNTLPPI-EDLVGLAIMDGETQIHYIPAIAGKLGSLRVYNALAEAFHGRLDRTS 59
> pmv:PMCN06_1853 hypothetical protein
Length=103
Score = 33.9 bits (76), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (51%), Gaps = 1/57 (2%)
Query 4 NEFLSYIPPIGEDLQHTKVSDDCTKLHSDIYLLHHIGDLNISNNLADAIKSRLQSVS 60
N L+ +PPI EDL + D T++H + +G L + N LA+A RL S
Sbjct 4 NTLLNTLPPI-EDLVGLAIMDGETQIHYIPAIAGKLGSLRVYNALAEAFHGRLDRTS 59
> pmu:PM1588 hypothetical protein
Length=103
Score = 33.9 bits (76), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (51%), Gaps = 1/57 (2%)
Query 4 NEFLSYIPPIGEDLQHTKVSDDCTKLHSDIYLLHHIGDLNISNNLADAIKSRLQSVS 60
N L+ +PPI EDL + D T++H + +G L + N LA+A RL S
Sbjct 4 NTLLNTLPPI-EDLVGLAIMDGETQIHYIPAIAGKLGSLRVYNALAEAFHGRLDRTS 59
> chx:102174902 LAMB4; laminin, beta 4
Length=1732
Score = 34.7 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 23/91 (25%), Positives = 46/91 (51%), Gaps = 11/91 (12%)
Query 52 IKSRLQSVSDFMPDDLRQSFDK-------LDDFQKMEVTDSRYAQWVSDKVSRTKQFMKE 104
+ +L++V +F +DL+++ + L+D Q E D + W + + +K K
Sbjct 1244 LSEQLKTVDEF--EDLKETIEXRSETNFLLEDLQ--EGNDLHSSAWNASLMDFSKNIKKY 1299
Query 105 YDTALSKLKDSEETEKLKVAQKNLRDFILRL 135
Y ++LS K + ET + KN R+++L +
Sbjct 1300 YQSSLSTEKKTNETTSIINNSKNTRNYLLSI 1330
> xce:Xcel_1224 HipA N-terminal domain-containing protein
Length=480
Score = 34.7 bits (78), Expect = 5.9, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 11/93 (12%)
Query 51 AIKSRLQSVSDFMPDDLRQSFDKLDDFQKMEVTDSRYAQWVSDKVSRTKQFMKEYDTALS 110
A+ R+ V+D +PD +R + D++DD+ S+ R M+E+ T ++
Sbjct 369 ALIDRVNEVADQIPDAMRDALDEIDDWDGQS----------SELAKRLLPAMQEHATRVA 418
Query 111 KLKDSEETEKLKVAQKNLRDFILRLGSAEESDN 143
+ SE T + VA D L GSA+ S N
Sbjct 419 QRMRSESTPREPVAPPIPNDG-LDYGSAQRSHN 450
> ola:101154987 centrosome and spindle pole associated protein
1-like
Length=294
Score = 34.3 bits (77), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 29/121 (24%), Positives = 51/121 (42%), Gaps = 13/121 (11%)
Query 12 PIGEDLQHTKVSDDCTKLHSDIYLLHHIGDLNISNNLADAIKSRLQSVSDFMPDDLRQSF 71
P G + D L SD+Y +H I + S A ++L SD P S
Sbjct 6 PWGRGGGGAPIKDQNGNLISDLYQMHRINEEKRSTPGAHETGAQLPGFSDQSPQQQLSSK 65
Query 72 DKLDDFQKMEVTDSRYAQW------------VSDKVSRTKQFMKE-YDTALSKLKDSEET 118
++L + QK ++ + + Q +++++ + FMK+ Y+ KLK +T
Sbjct 66 ERLREEQKGQIEEKKRRQAEERARMRIIEEKEEERLAKERLFMKQNYEEEQRKLKPKNKT 125
Query 119 E 119
E
Sbjct 126 E 126
Lambda K H a alpha
0.315 0.131 0.365 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 124941655230