bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: all_orgs
           14,240,465 sequences; 5,121,972,263 total letters





Query= Contig-13_CDS_annotation_glimmer3.pl_2_6

Length=57
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  cic:CICLE_v10023610mg  hypothetical protein                         32.7    4.8
  scos:SCR2_0183  putative primase-related protein (EC:3.1.26.8)      32.0    5.0
  scon:SCRE_0183  putative primase-related protein (EC:3.1.26.8)      32.0    5.0
  scg:SCI_0203  putative primase-related protein (EC:3.1.26.8)        32.0    5.0
  pper:PRUPE_ppa001249mg  hypothetical protein                        32.0    8.0
  ssm:Spirs_3956  family 1 extracellular solute-binding protein       31.6    9.4


> cic:CICLE_v10023610mg  hypothetical protein
Length=1484

 Score = 32.7 bits (73),  Expect = 4.8, Method: Composition-based stats.
 Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 0/38 (0%)

Query  14   EAENLKKALRQVSYFEKKTGYEIVSIEIIKNGKEEETK  51
            E E L++AL+Q++YFEKK    +V   ++K    E+ K
Sbjct  328  EYEGLREALKQLAYFEKKENSRVVQSGVLKGLNLEDIK  365


> scos:SCR2_0183  putative primase-related protein (EC:3.1.26.8)
Length=192

 Score = 32.0 bits (71),  Expect = 5.0, Method: Compositional matrix adjust.
 Identities = 18/37 (49%), Positives = 27/37 (73%), Gaps = 3/37 (8%)

Query  12   IEEA--ENLKKALRQVS-YFEKKTGYEIVSIEIIKNG  45
            IE A  E+LK AL QV+ +FEKKT ++I  +++I+ G
Sbjct  100  IEHASYEDLKAALSQVTKHFEKKTDFDITRLDLIRLG  136


> scon:SCRE_0183  putative primase-related protein (EC:3.1.26.8)
Length=192

 Score = 32.0 bits (71),  Expect = 5.0, Method: Compositional matrix adjust.
 Identities = 18/37 (49%), Positives = 27/37 (73%), Gaps = 3/37 (8%)

Query  12   IEEA--ENLKKALRQVS-YFEKKTGYEIVSIEIIKNG  45
            IE A  E+LK AL QV+ +FEKKT ++I  +++I+ G
Sbjct  100  IEHASYEDLKAALSQVTKHFEKKTDFDITRLDLIRLG  136


> scg:SCI_0203  putative primase-related protein (EC:3.1.26.8)
Length=192

 Score = 32.0 bits (71),  Expect = 5.0, Method: Compositional matrix adjust.
 Identities = 18/37 (49%), Positives = 27/37 (73%), Gaps = 3/37 (8%)

Query  12   IEEA--ENLKKALRQVS-YFEKKTGYEIVSIEIIKNG  45
            IE A  E+LK AL QV+ +FEKKT ++I  +++I+ G
Sbjct  100  IEHASYEDLKAALSQVTKHFEKKTDFDITRLDLIRLG  136


> pper:PRUPE_ppa001249mg  hypothetical protein
Length=872

 Score = 32.0 bits (71),  Expect = 8.0, Method: Composition-based stats.
 Identities = 16/45 (36%), Positives = 27/45 (60%), Gaps = 0/45 (0%)

Query  12   IEEAENLKKALRQVSYFEKKTGYEIVSIEIIKNGKEEETKILLDK  56
            +EEAENL K++ +   F     Y I  + ++KNGK  E +++L +
Sbjct  310  LEEAENLFKSMEKAGNFINLESYNIWLLGLVKNGKLLEARLVLKE  354


> ssm:Spirs_3956  family 1 extracellular solute-binding protein
Length=342

 Score = 31.6 bits (70),  Expect = 9.4, Method: Compositional matrix adjust.
 Identities = 12/26 (46%), Positives = 19/26 (73%), Gaps = 0/26 (0%)

Query  24   QVSYFEKKTGYEIVSIEIIKNGKEEE  49
            ++++  + TGYE+ SI +IKNG  EE
Sbjct  239  EITFPSEGTGYEVASISLIKNGPAEE  264



Lambda      K        H        a         alpha
   0.304    0.129    0.322    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 126758474451