bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: all_orgs
14,240,465 sequences; 5,121,972,263 total letters
Query= Contig-16_CDS_annotation_glimmer3.pl_2_2
Length=545
Score E
Sequences producing significant alignments: (Bits) Value
nle:100586899 CTSL2; cathepsin L2 39.3 2.0
ptr:464593 CTSL2; cathepsin L2 39.3 2.1
pon:100439744 CTSL2; cathepsin L2 39.3 2.1
pps:100974568 CTSL2; cathepsin L2 39.3 2.1
ggo:101143768 CTSL2; cathepsin L2 isoform 1 38.9
hsa:1515 CTSV, CATL2, CTSL2, CTSU; cathepsin V (EC:3.4.22.43) 38.9 2.2
ccu:Ccur_00220 formate dehydrogenase, alpha subunit 38.5 4.4
sbz:A464_1723 hypothetical protein 38.5 4.7
mcc:710850 CTSL2; cathepsin L2 37.7 5.0
slr:L21SP2_2619 hypothetical protein 37.4 5.9
pseu:Pse7367_3044 peptidase M50 37.4 9.9
> nle:100586899 CTSL2; cathepsin L2
Length=334
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/133 (23%), Positives = 51/133 (38%), Gaps = 20/133 (15%)
Query 384 YIIGIGSITPRIDYSQGNEFYAYHQTVDDIHKPALDGIGYQDSVNWQRAFWDRQYNT--- 440
+ +GI S P+ D + ++Y + T ++ +G W+RA W++
Sbjct 10 FCLGIASAVPKFDQNLDTKWYQWKATHRRLYGANEEG--------WRRAVWEKNMKMIEL 61
Query 441 -TGQIQQPAVGKTVAWINYMTNINRTFGNFADNNSEAFMVMNRNYEYRSGTTFGTTAIND 499
G+ Q G T+A FG+ + M RN ++R G F D
Sbjct 62 HNGEYSQGKHGFTMA--------MNAFGDMTNEEFRQMMGCFRNQKFRKGKVFREPLFLD 113
Query 500 LTTYIDPVKFNYI 512
L +D K Y+
Sbjct 114 LPKSVDWRKKGYV 126
> ptr:464593 CTSL2; cathepsin L2
Length=334
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 30/133 (23%), Positives = 51/133 (38%), Gaps = 20/133 (15%)
Query 384 YIIGIGSITPRIDYSQGNEFYAYHQTVDDIHKPALDGIGYQDSVNWQRAFWDRQYNT--- 440
+ +GI S P+ D + ++Y + T ++ +G W+RA W++
Sbjct 10 FCLGIASAVPKFDQNLDTKWYQWKATHRRLYGANEEG--------WRRAVWEKNMKMIEL 61
Query 441 -TGQIQQPAVGKTVAWINYMTNINRTFGNFADNNSEAFMVMNRNYEYRSGTTFGTTAIND 499
G+ Q G T+A FG+ + M RN ++R G F D
Sbjct 62 HNGEYSQGKHGFTMA--------MNAFGDMTNEEFRQMMGCFRNQKFRKGKVFREPLFLD 113
Query 500 LTTYIDPVKFNYI 512
L +D K Y+
Sbjct 114 LPKSVDWRKKGYV 126
> pon:100439744 CTSL2; cathepsin L2
Length=334
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 30/133 (23%), Positives = 51/133 (38%), Gaps = 20/133 (15%)
Query 384 YIIGIGSITPRIDYSQGNEFYAYHQTVDDIHKPALDGIGYQDSVNWQRAFWDRQYNT--- 440
+ +GI S P+ D + ++Y + T ++ +G W+RA W++
Sbjct 10 FCLGIASAVPKFDQNLDTKWYQWKATHRRLYGANEEG--------WRRAVWEKNMKMIEL 61
Query 441 -TGQIQQPAVGKTVAWINYMTNINRTFGNFADNNSEAFMVMNRNYEYRSGTTFGTTAIND 499
G+ Q G T+A FG+ + M RN ++R G F D
Sbjct 62 HNGEYSQGKHGFTMA--------MNAFGDMTNEEFRQMMGCFRNQKFRKGKVFREPLFLD 113
Query 500 LTTYIDPVKFNYI 512
L +D K Y+
Sbjct 114 LPKSVDWRKKGYV 126
> pps:100974568 CTSL2; cathepsin L2
Length=334
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 30/133 (23%), Positives = 51/133 (38%), Gaps = 20/133 (15%)
Query 384 YIIGIGSITPRIDYSQGNEFYAYHQTVDDIHKPALDGIGYQDSVNWQRAFWDRQYNT--- 440
+ +GI S P+ D + ++Y + T ++ +G W+RA W++
Sbjct 10 FCLGIASAVPKFDQNLDTKWYQWKATHRRLYGANEEG--------WRRAVWEKNMKMIEL 61
Query 441 -TGQIQQPAVGKTVAWINYMTNINRTFGNFADNNSEAFMVMNRNYEYRSGTTFGTTAIND 499
G+ Q G T+A FG+ + M RN ++R G F D
Sbjct 62 HNGEYSQGKHGFTMA--------MNAFGDMTNEEFRQMMGCFRNQKFRKGKVFREPLFLD 113
Query 500 LTTYIDPVKFNYI 512
L +D K Y+
Sbjct 114 LPKSVDWRKKGYV 126
> ggo:101143768 CTSL2; cathepsin L2 isoform 1
Length=334
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/133 (23%), Positives = 51/133 (38%), Gaps = 20/133 (15%)
Query 384 YIIGIGSITPRIDYSQGNEFYAYHQTVDDIHKPALDGIGYQDSVNWQRAFWDRQYNT--- 440
+ +GI S P+ D + ++Y + T ++ +G W+RA W++
Sbjct 10 FCLGIASAVPKFDQNLDTKWYQWKATHRRLYGANEEG--------WRRAVWEKNMKMIEL 61
Query 441 -TGQIQQPAVGKTVAWINYMTNINRTFGNFADNNSEAFMVMNRNYEYRSGTTFGTTAIND 499
G+ Q G T+A FG+ + M RN ++R G F D
Sbjct 62 HNGEYSQGKHGFTMA--------MNAFGDMTNEEFRQMMGCFRNQKFRKGKVFREPLFLD 113
Query 500 LTTYIDPVKFNYI 512
L +D K Y+
Sbjct 114 LPKSVDWRKKGYV 126
> hsa:1515 CTSV, CATL2, CTSL2, CTSU; cathepsin V (EC:3.4.22.43)
Length=334
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/133 (23%), Positives = 51/133 (38%), Gaps = 20/133 (15%)
Query 384 YIIGIGSITPRIDYSQGNEFYAYHQTVDDIHKPALDGIGYQDSVNWQRAFWDRQYNT--- 440
+ +GI S P+ D + ++Y + T ++ +G W+RA W++
Sbjct 10 FCLGIASAVPKFDQNLDTKWYQWKATHRRLYGANEEG--------WRRAVWEKNMKMIEL 61
Query 441 -TGQIQQPAVGKTVAWINYMTNINRTFGNFADNNSEAFMVMNRNYEYRSGTTFGTTAIND 499
G+ Q G T+A FG+ + M RN ++R G F D
Sbjct 62 HNGEYSQGKHGFTMA--------MNAFGDMTNEEFRQMMGCFRNQKFRKGKVFREPLFLD 113
Query 500 LTTYIDPVKFNYI 512
L +D K Y+
Sbjct 114 LPKSVDWRKKGYV 126
> ccu:Ccur_00220 formate dehydrogenase, alpha subunit
Length=906
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (51%), Gaps = 14/89 (16%)
Query 109 NPEKMQIPIINNKSTLQFQPAGIFQNDDLELTFFSSASEAYLTFKPEEIGEFNPDEGDLA 168
+P+++ P+I N++T +F+PA +D L+L S E T+ P+ + F
Sbjct 275 SPDRLTTPLIKNRTTGEFEPAS--WDDALDLV-ASRFVELKNTYGPDSLAAFACSRS--- 328
Query 169 INKLPSNQDLYILKSMTSKQRVIIANNNL 197
SN+D+Y+L+ M RV NN+
Sbjct 329 -----SNEDIYMLQKMA---RVAFGTNNV 349
> sbz:A464_1723 hypothetical protein
Length=1444
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 32/87 (37%), Positives = 38/87 (44%), Gaps = 18/87 (21%)
Query 72 FKNYYANTQEENFWT-IGATPKVAKVTVTTGTDIFVSDNP-----------EKMQIPIIN 119
F NY NT EEN W IG T + TVT GT VSDN + P++N
Sbjct 174 FSNYEVNTSEENTWNLIGETTALTPWTVTEGTLAIVSDNSLGAADGALTLNGGVLQPLLN 233
Query 120 NKSTLQFQ------PAGIFQNDDLELT 140
ST +F GI + DL LT
Sbjct 234 INSTRRFNLTDKSLNGGILTDRDLTLT 260
> mcc:710850 CTSL2; cathepsin L2
Length=334
Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 30/133 (23%), Positives = 51/133 (38%), Gaps = 20/133 (15%)
Query 384 YIIGIGSITPRIDYSQGNEFYAYHQTVDDIHKPALDGIGYQDSVNWQRAFWDRQYNT--- 440
+ +GI S P+ D + ++Y + T ++ + +G W+RA W++
Sbjct 10 FCLGIASAVPKFDQNLDTKWYQWKATHRRLYGASEEG--------WRRAVWEKNMKMIEL 61
Query 441 -TGQIQQPAVGKTVAWINYMTNINRTFGNFADNNSEAFMVMNRNYEYRSGTTFGTTAIND 499
G+ Q G T+A FG+ + M RN + R G F D
Sbjct 62 HNGEYSQGKHGFTMA--------MNAFGDMTNEEFRQVMGCFRNQKLRKGKLFREPLFLD 113
Query 500 LTTYIDPVKFNYI 512
L +D K Y+
Sbjct 114 LPKSVDWRKKGYV 126
> slr:L21SP2_2619 hypothetical protein
Length=271
Score = 37.4 bits (85), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 30/101 (30%), Positives = 44/101 (44%), Gaps = 16/101 (16%)
Query 315 LETVFTGGNYMERCE-----------TPVFEGGMSQEIVFQEVISNSASGEEPLGTLAGR 363
LET GGNY R + P G + I ++ + S +G LAGR
Sbjct 58 LETANLGGNYSGRSKPEILQTDGEVSAPALTGAGNGTISLHGSLTMARS----MGFLAGR 113
Query 364 GISTEKQKGGHVKIKVTEPCYIIGIGSITPRIDYSQGNEFY 404
S E + G + + E +I G G++ R+D +G EFY
Sbjct 114 IASRETAQPGDIFAALVEDHFIPGPGAVVHRVDLPEG-EFY 153
> pseu:Pse7367_3044 peptidase M50
Length=520
Score = 37.4 bits (85), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 38/147 (26%), Positives = 67/147 (46%), Gaps = 17/147 (12%)
Query 130 GIFQNDDLELTFFSSASEAY---LTFKPEEIGEFNPDEGDLAI---NKLPSNQDLYILKS 183
GIF D TF+++ + Y + FK GE + +LA +LP DL++++
Sbjct 163 GIFGVD----TFYATETLPYQEGVIFKGNLRGEPSEVHAELAAALQKRLPDKYDLFLVEG 218
Query 184 MTSKQRVIIANN-NLGQLDELREEIL---LTKGNTAYIVNNSNNVPLLKSFTQRMTTNLL 239
+ V+I ++ ++ ++++IL L G+ A V N L+ T ++
Sbjct 219 QDKRPVVVILPQIDIDAVNPMQQKILAGLLLVGSFATCVALGNQ---LQEIDIMQTNQII 275
Query 240 NTTSSQFGLALKTYNSDLLQNWINTEW 266
N GLAL +L Q WI T++
Sbjct 276 NALPFAIGLALILAGRELAQRWIATKY 302
Lambda K H a alpha
0.316 0.133 0.393 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 1222841935200