bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: all_orgs
           14,240,465 sequences; 5,121,972,263 total letters





Query= Contig-16_CDS_annotation_glimmer3.pl_2_5

Length=70
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  ddf:DEFDS_1235  hypothetical protein                                32.7    1.4
  ago:AGOS_ADR321C  ADR321Cp                                          32.0    7.7


> ddf:DEFDS_1235  hypothetical protein
Length=99

 Score = 32.7 bits (73),  Expect = 1.4, Method: Compositional matrix adjust.
 Identities = 22/58 (38%), Positives = 29/58 (50%), Gaps = 1/58 (2%)

Query  10  RRNKKSGAIVMTNLEAKWTYKIALGIATESNINETHELICVVETSKILLKDDKEEKKE  67
           RR K  G IV  N   K  YKI+L   TE  + + HE+    E + IL ++ K   KE
Sbjct  33  RRKKMHGNIVKYNDFTK-VYKISLDDGTEVAVVDFHEMDAFFENNNILFQNRKGLHKE  89


> ago:AGOS_ADR321C  ADR321Cp
Length=383

 Score = 32.0 bits (71),  Expect = 7.7, Method: Composition-based stats.
 Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)

Query  1    MAATNWTVIRRNKKSGAIVMTNLEAKWTYKIALGIATESNINETHELICVVETSKILL  58
            + A  +  +RR++  G  V+ +L+++W  K  L +A  S I   H L+C    + ILL
Sbjct  161  LVAYAYYRLRRSRSWG--VLRHLDSRWPQKDGLMLALASGIWSAHSLLCAKCVADILL  216



Lambda      K        H        a         alpha
   0.311    0.125    0.346    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 126668436524