bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: all_orgs
           14,240,465 sequences; 5,121,972,263 total letters





Query= Contig-17_CDS_annotation_glimmer3.pl_2_6

Length=592
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  mpr:MPER_03502  hypothetical protein                                36.6    5.9
  hbo:Hbor_15680  glycine/d-amino acid oxidase, deaminating           37.7    6.5


> mpr:MPER_03502  hypothetical protein 
Length=163

 Score = 36.6 bits (83),  Expect = 5.9, Method: Composition-based stats.
 Identities = 23/79 (29%), Positives = 40/79 (51%), Gaps = 5/79 (6%)

Query  154  AIHTSTTPDKINIGIASGDSVEITPKNTYEAD--ELIITWFDMSTETTRTGKPTEFGTWS  211
            A+ T + P  +        +++  P +T EA   + +ITW+D    + RT    + G W+
Sbjct  36   ALPTESRPSAVTWWTKRARTIKGVPPSTTEAQFPQSVITWWDSMMPSWRT--QNQDGHWA  93

Query  212  KT-SGNWNVVMAPTQVGLL  229
            +T  G+W ++  P Q GLL
Sbjct  94   QTGEGDWGILHCPGQNGLL  112


> hbo:Hbor_15680  glycine/d-amino acid oxidase, deaminating
Length=376

 Score = 37.7 bits (86),  Expect = 6.5, Method: Compositional matrix adjust.
 Identities = 20/72 (28%), Positives = 36/72 (50%), Gaps = 0/72 (0%)

Query  119  FDIFKNYYANTQEENFYIIGATETITNIKVTQAEGAIHTSTTPDKINIGIASGDSVEITP  178
            +D+ +++ A  Q +  +++     I + +  QA G    +  P +    +A G     TP
Sbjct  130  YDLPEDHRAVYQPDGGFLVPEQCIIAHTEAAQAAGGEIRAREPMRDFTPLADGGVRVTTP  189

Query  179  KNTYEADELIIT  190
            K TYEAD L++T
Sbjct  190  KGTYEADRLVVT  201



Lambda      K        H        a         alpha
   0.316    0.133    0.400    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 1357117510358