bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: all_orgs
14,240,465 sequences; 5,121,972,263 total letters
Query= Contig-19_CDS_annotation_glimmer3.pl_2_2
Length=167
Score E
Sequences producing significant alignments: (Bits) Value
lra:LRHK_495 HAD hydrolase 37.4 0.89
lrl:LC705_00481 HAD superfamily hydrolase 37.4 0.89
lrh:LGG_00492 HAD superfamily hydrolase 37.4 0.91
lrc:LOCK908_0487 Hydrolase (HAD superfamily) 37.4 0.91
lrg:LRHM_0476 hydrolase 37.4 0.93
tre:TRIREDRAFT_70800 hypothetical protein 36.2 2.6
lro:LOCK900_0458 Hydrolase (HAD superfamily) 35.8 3.3
hoh:Hoch_1150 transposase 35.0 5.5
hoh:Hoch_2960 transposase 35.0 6.1
mel:Metbo_1357 CCA-adding enzyme (EC:2.7.7.72) 34.3 9.9
> lra:LRHK_495 HAD hydrolase
Length=275
Score = 37.4 bits (85), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 4/59 (7%)
Query 108 YCKDRNIQSYTEMQAWLEHL---ISEGQSLENDVAAYQAAKLAEQQQAVENQQNQQSAQ 163
Y DRNI YT +QAW H + E Q + +D + L E +Q V N Q Q A+
Sbjct 121 YTADRNISRYTVLQAWENHAGIKVREPQEMPDDFVIAKGILLGEPEQ-VANIQPQAEAE 178
> lrl:LC705_00481 HAD superfamily hydrolase
Length=275
Score = 37.4 bits (85), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 4/59 (7%)
Query 108 YCKDRNIQSYTEMQAWLEHL---ISEGQSLENDVAAYQAAKLAEQQQAVENQQNQQSAQ 163
Y DRNI YT +QAW H + E Q + +D + L E +Q V N Q Q A+
Sbjct 121 YTADRNISRYTVLQAWENHAGIKVREPQEMPDDFVIAKGILLGEPEQ-VANIQPQAEAE 178
> lrh:LGG_00492 HAD superfamily hydrolase
Length=272
Score = 37.4 bits (85), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 4/59 (7%)
Query 108 YCKDRNIQSYTEMQAWLEHL---ISEGQSLENDVAAYQAAKLAEQQQAVENQQNQQSAQ 163
Y DRNI YT +QAW H + E Q + +D + L E +Q V N Q Q A+
Sbjct 118 YTADRNISRYTVLQAWENHAGIKVREPQEMPDDFVIAKGILLGEPEQ-VANIQPQAEAE 175
> lrc:LOCK908_0487 Hydrolase (HAD superfamily)
Length=275
Score = 37.4 bits (85), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 4/59 (7%)
Query 108 YCKDRNIQSYTEMQAWLEHL---ISEGQSLENDVAAYQAAKLAEQQQAVENQQNQQSAQ 163
Y DRNI YT +QAW H + E Q + +D + L E +Q V N Q Q A+
Sbjct 121 YTADRNISRYTVLQAWENHAGIKVREPQEMPDDFVIAKGILLGEPEQ-VANIQPQAEAE 178
> lrg:LRHM_0476 hydrolase
Length=275
Score = 37.4 bits (85), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 4/59 (7%)
Query 108 YCKDRNIQSYTEMQAWLEHL---ISEGQSLENDVAAYQAAKLAEQQQAVENQQNQQSAQ 163
Y DRNI YT +QAW H + E Q + +D + L E +Q V N Q Q A+
Sbjct 121 YTADRNISRYTVLQAWENHAGIKVREPQEMPDDFVIAKGILLGEPEQ-VANIQPQAEAE 178
> tre:TRIREDRAFT_70800 hypothetical protein
Length=640
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 17/38 (45%), Positives = 21/38 (55%), Gaps = 0/38 (0%)
Query 63 SDYSVLSGQAAIDQMNPTQLRRYLNGLRPSSSPYTHRY 100
++Y+ G AI Q+NPT YLN RPSS T Y
Sbjct 290 TNYTTTRGNNAIAQVNPTGGNDYLNNYRPSSPSRTFEY 327
> lro:LOCK900_0458 Hydrolase (HAD superfamily)
Length=275
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/57 (32%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Query 108 YCKDRNIQSYTEMQAWLEHL---ISEGQSLENDVAAYQAAKLAEQQQAVENQQNQQS 161
Y DRNI YT +QAW H + E Q + +D + L E +Q + Q ++
Sbjct 121 YTADRNISRYTVLQAWENHAGIKVREPQEMPDDFVIAKGILLGEPEQVAKIQPQAEA 177
> hoh:Hoch_1150 transposase
Length=330
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 4/47 (9%)
Query 40 LREQSPVEDFLFEDNFDGSRTFVSDYSVLSGQAAIDQMNPTQLRRYL 86
LR+Q D LF DG TF+ Y +L Q+ +D+M P +L RY+
Sbjct 62 LRQQH--TDLLFSAPLDGEPTFL--YLLLEHQSTVDRMMPLRLLRYM 104
> hoh:Hoch_2960 transposase
Length=329
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 4/47 (9%)
Query 40 LREQSPVEDFLFEDNFDGSRTFVSDYSVLSGQAAIDQMNPTQLRRYL 86
LR+Q D LF DG TF+ Y +L Q+ +D+M P +L RY+
Sbjct 53 LRQQH--TDLLFSAPLDGEPTFL--YLLLEHQSTVDRMMPLRLLRYM 95
> mel:Metbo_1357 CCA-adding enzyme (EC:2.7.7.72)
Length=461
Score = 34.3 bits (77), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
Query 48 DFLFEDNFDGSRTFVSDYSVLSGQAAIDQMNPTQLRRYLNGLRPSSSPYTHRYNDDFLLE 107
D L + D S + Y + G I +M RY +S PY Y +D+ ++
Sbjct 66 DILMKFPLDTSTKLLKKYGLEIGHETIKKMEGAAEERY------ASHPYVTGYINDYYID 119
Query 108 YCKDRNIQSYTEMQA 122
+ +I+SY E+++
Sbjct 120 FVPCYDIKSYKELKS 134
Lambda K H a alpha
0.315 0.128 0.365 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 128668516977