bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: all_orgs
           14,240,465 sequences; 5,121,972,263 total letters





Query= Contig-19_CDS_annotation_glimmer3.pl_2_5

Length=147
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  sat:SYN_00102  seryl-tRNA synthetase (EC:6.1.1.11)                  34.7    6.3


> sat:SYN_00102  seryl-tRNA synthetase (EC:6.1.1.11)
Length=448

 Score = 34.7 bits (78),  Expect = 6.3, Method: Composition-based stats.
 Identities = 22/74 (30%), Positives = 30/74 (41%), Gaps = 11/74 (15%)

Query  69   KVEKWSNDSYVRENLSIYYFYPLTDVDIMKCSYSEI----------VFYSPVLRASYADY  118
            ++ K++ D +  ENL  YY  P  +V +      EI          V YSP  RA    Y
Sbjct  232  QLPKFAEDLFKIENLE-YYLIPTAEVPVTNIHREEILEEKALPIYYVAYSPCFRAEAGSY  290

Query  119  AADNRERIKHKALN  132
              D R  I+    N
Sbjct  291  GKDTRGLIRQHQFN  304



Lambda      K        H        a         alpha
   0.322    0.135    0.403    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 127486103328