bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: all_orgs
14,240,465 sequences; 5,121,972,263 total letters
Query= Contig-28_CDS_annotation_glimmer3.pl_2_3
Length=235
Score E
Sequences producing significant alignments: (Bits) Value
obr:102707274 uncharacterized LOC102707274 38.5 1.2
pog:Pogu_2463 aspartate carbamoyltransferase (EC:2.1.3.2) 37.4 1.9
rpa:RPA2488 hypothetical protein 37.4 2.2
pas:Pars_0028 pyrB; aspartate carbamoyltransferase 37.4 2.2
rpt:Rpal_2767 beta-lactamase domain-containing protein 37.0 2.8
rpx:Rpdx1_3028 putative metallo-beta-lactamase family protein 35.8 7.1
coo:CCU_29210 Uncharacterized protein related to glutamine syn... 35.4 9.7
> obr:102707274 uncharacterized LOC102707274
Length=867
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/83 (29%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
Query 92 ILASSIEPNTIIRERLPKTLHEQLQITLPKG---KRRDHFTSLRITITAAGDMIIVIRQG 148
+L SS+ ++ RE+L + +QL+I LP G + + S R+ AG+ ++ I
Sbjct 527 VLDSSVSISSETREQL---VRKQLEIFLPHGDGVEATGEYDSKRMLTATAGETLVSILSK 583
Query 149 CKPGAIMILQLQKTTVGPFAGIL 171
CKP ++ IL+ + + +G+L
Sbjct 584 CKPISLFILRERNDIIDHLSGML 606
> pog:Pogu_2463 aspartate carbamoyltransferase (EC:2.1.3.2)
Length=303
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 22/38 (58%), Gaps = 1/38 (3%)
Query 14 LGHIPGSIRTGLPGDLRYNSTANRLLDTIITFDAPTCL 51
GHI G + GL GDLRY T N LL+ + FD T L
Sbjct 147 FGHIDG-LNIGLMGDLRYARTINSLLEALANFDVRTFL 183
> rpa:RPA2488 hypothetical protein
Length=329
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/104 (28%), Positives = 44/104 (42%), Gaps = 9/104 (9%)
Query 101 TIIRERLPKTLHEQLQITLPKGKRRDHFTSLRITITAAGDMIIVIRQGCKPGAIMILQLQ 160
++++ + + L LPK K F L I G ++V+ G PGA
Sbjct 69 NVMKDEVGEALEAAF---LPKDKVSIQFAPLVINT---GGKLVVLDTGNGPGA---FASS 119
Query 161 KTTVGPFAGILHPAANTLTTWDLNTFTNYTLCHRSALLDMDGRP 204
K VG FAG + A DL +++ H + LLD G+P
Sbjct 120 KGNVGQFAGNMAAAGFDAKAVDLVVISHFHGDHINGLLDASGKP 163
> pas:Pars_0028 pyrB; aspartate carbamoyltransferase
Length=305
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 22/38 (58%), Gaps = 1/38 (3%)
Query 14 LGHIPGSIRTGLPGDLRYNSTANRLLDTIITFDAPTCL 51
GHI G + GL GDLRY T N LL+ + FD T L
Sbjct 147 FGHIDG-LNIGLMGDLRYARTINSLLEALANFDVRTFL 183
> rpt:Rpal_2767 beta-lactamase domain-containing protein
Length=329
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 44/103 (43%), Gaps = 9/103 (9%)
Query 102 IIRERLPKTLHEQLQITLPKGKRRDHFTSLRITITAAGDMIIVIRQGCKPGAIMILQLQK 161
++++ + + L LPK K F L I G ++V+ G PGA K
Sbjct 70 VMKDEVGEALEAAF---LPKDKVSIQFAPLVINT---GGKLVVLDTGNGPGA---FASSK 120
Query 162 TTVGPFAGILHPAANTLTTWDLNTFTNYTLCHRSALLDMDGRP 204
VG FAG + A DL +++ H + LLD G+P
Sbjct 121 GNVGQFAGNMAAAGFDTKAVDLVVISHFHGDHINGLLDASGKP 163
> rpx:Rpdx1_3028 putative metallo-beta-lactamase family protein
Length=329
Score = 35.8 bits (81), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 43/103 (42%), Gaps = 9/103 (9%)
Query 102 IIRERLPKTLHEQLQITLPKGKRRDHFTSLRITITAAGDMIIVIRQGCKPGAIMILQLQK 161
++++ + + L LPK K F L I G ++V+ G PGA K
Sbjct 70 VMKDEVSEALEASF---LPKDKVSIQFAPLVINT---GGKLVVVDTGNGPGA---FASSK 120
Query 162 TTVGPFAGILHPAANTLTTWDLNTFTNYTLCHRSALLDMDGRP 204
VG FA + A DL +++ H + LLD G+P
Sbjct 121 GNVGQFASNMAAAGFDPKAVDLVVISHFHADHINGLLDASGKP 163
> coo:CCU_29210 Uncharacterized protein related to glutamine synthetase
(EC:6.3.1.2)
Length=702
Score = 35.4 bits (80), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 32/51 (63%), Gaps = 2/51 (4%)
Query 88 RMGTILASSIEPNTIIRERLPKTLHEQLQITLPKGKRRDHFTSLRITITAA 138
++ + S + + ++RERLPK +++ L+ T+ KG+ D TS+ ++ AA
Sbjct 4 KISAVFGSHVFSDQVMRERLPKAVYKSLKATIDKGEPLD--TSIADSVAAA 52
Lambda K H a alpha
0.323 0.138 0.405 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 319950948800