bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: all_orgs
           14,240,465 sequences; 5,121,972,263 total letters





Query= Contig-30_CDS_annotation_glimmer3.pl_2_5

Length=119
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  nam:NAMH_1781  nucleotide pyrophosphohydrolase                      33.1    5.6
  tor:R615_13115  hypothetical protein                                33.5    6.7


> nam:NAMH_1781  nucleotide pyrophosphohydrolase
Length=109

 Score = 33.1 bits (74),  Expect = 5.6, Method: Compositional matrix adjust.
 Identities = 22/71 (31%), Positives = 36/71 (51%), Gaps = 3/71 (4%)

Query  44   GMPVSSGVRSGDYPDHDQDFDDVLPTEDPDFDLADYATLKNDLADRERQRKIDMEKAYKE  103
             + VS  + +G+  +H Q  +     +D  +++AD       LAD   +  ID+EKA+ E
Sbjct  27   NLAVSISIEAGELLEHFQWKEGCENKKDISYEMADILAYLLLLAD---ECSIDLEKAFLE  83

Query  104  KLEKEKTPDPA  114
            K+E  K   PA
Sbjct  84   KMEINKKKYPA  94


> tor:R615_13115  hypothetical protein
Length=331

 Score = 33.5 bits (75),  Expect = 6.7, Method: Compositional matrix adjust.
 Identities = 24/64 (38%), Positives = 33/64 (52%), Gaps = 6/64 (9%)

Query  51   VRSGDYPDH---DQDFDD---VLPTEDPDFDLADYATLKNDLADRERQRKIDMEKAYKEK  104
            V S  YP+H   DQ F     VL    P+ D   Y+ L + L DRE++ +I+ +K Y  K
Sbjct  157  VGSLKYPEHLTPDQIFRSYLLVLAVGKPEMDSLGYSLLNHILLDREQRFRIEDDKLYVSK  216

Query  105  LEKE  108
              KE
Sbjct  217  GRKE  220



Lambda      K        H        a         alpha
   0.312    0.133    0.373    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 128610645009