bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: all_orgs
           14,240,465 sequences; 5,121,972,263 total letters





Query= Contig-31_CDS_annotation_glimmer3.pl_2_3

Length=365
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  smo:SELMODRAFT_134022  hypothetical protein                         40.8    0.46


> smo:SELMODRAFT_134022  hypothetical protein
Length=730

 Score = 40.8 bits (94),  Expect = 0.46, Method: Compositional matrix adjust.
 Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 3/91 (3%)

Query  59   AQKSRDYMTDMWNKTNEYNSPSAMRQRLVEAGYNPYLGLNSGAAGSASNVGSPATGSAAA  118
            A +S+D + D WN  +  N P  +  R + AG     G+ +G  G+A   G     S AA
Sbjct  98   AARSQDALVDCWNGDDSLNVPRGVTLRSLVAGRRFVCGIETGDGGTARCWGD---ASLAA  154

Query  119  AAPQQSYDWSNLASSVSSAFQIANQTQQTNA  149
             AP    ++ +L++    A  I  ++++   
Sbjct  155  TAPPGDVEFESLSAGGEHACGIVRKSREIRC  185



Lambda      K        H        a         alpha
   0.310    0.122    0.344    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 697550940352