bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: all_orgs
14,240,465 sequences; 5,121,972,263 total letters
Query= Contig-31_CDS_annotation_glimmer3.pl_2_6
Length=236
Score E
Sequences producing significant alignments: (Bits) Value
clp:CPK_ORF00729 hypothetical protein 41.2 0.029
pfs:PFLU5052 putative aminotransferase 39.3 0.53
psk:U771_26230 aminotransferase 38.9 0.64
bmy:Bm1_07705 hypothetical protein 36.6 0.72
amg:AMEC673_00400 replication protein A 38.5 0.91
vex:VEA_003288 replication protein 38.5 1.1
ndi:NDAI_0F00320 NDAI0F00320; hypothetical protein 38.1 1.3
npa:UCRNP2_9887 putative fad binding domain protein 37.4 2.0
pfc:PflA506_4359 ybdL; aminotransferase YbdL (EC:2.6.1.-) 37.4 2.3
cpt:CpB0227 hypothetical protein 35.4 2.3
cpj:CPj0222 hypothetical protein 35.4 2.3
cpa:CP0543 hypothetical protein 35.4 2.3
cpn:CPn0222 hypothetical protein 35.4 2.3
mmaz:MmTuc01_1822 Glutamate-1-semialdehyde aminotransferase 37.0 2.7
mma:MM_1743 glutamate-1-semialdehyde aminotransferase (EC:5.4.... 36.6 3.7
sers:SERRSCBI_07805 replication protein A 36.2 3.9
mmk:MU9_2817 hypothetical protein 36.6 4.3
mac:MA0581 hemL; glutamate-1-semialdehyde aminotransferase (EC... 36.2 4.8
ppuu:PputUW4_00944 aminotransferase (EC:2.6.1.-) 36.2 5.0
vvu:VV1_2465 replication protein 36.2 5.1
sang:SAIN_1071 hypothetical protein 35.8 5.8
ppz:H045_16130 methionine aminotransferase 35.8 6.4
vvy:VV1773 hypothetical protein 35.4 9.0
> clp:CPK_ORF00729 hypothetical protein
Length=121
Score = 41.2 bits (95), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/48 (48%), Positives = 32/48 (67%), Gaps = 6/48 (13%)
Query 44 FELFMKRLRSNLKQQGLPHEEIRYYCVSEYGPQTLRPHWHLLLF-FDS 90
+LF+KRLR + PH+ IRY+ EYG + RPH+HLL+F +DS
Sbjct 75 LQLFLKRLRDRIS----PHK-IRYFGCGEYGTKLQRPHYHLLIFNYDS 117
> pfs:PFLU5052 putative aminotransferase
Length=382
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 34/123 (28%), Positives = 52/123 (42%), Gaps = 13/123 (11%)
Query 30 SEWKLQIPVIRNRDFELFMKRLRSNLKQQGLP------HEEI--RYYCVSEYGPQTLRPH 81
+E L +IR+RD L + +L G+P HEE+ R + VS +G
Sbjct 177 AELDLLAALIRDRDIYLVSDEVYEHLVFDGVPHVSVLAHEELYQRAFVVSSFGKTYHVTG 236
Query 82 WHLLLFFDSPQLTQAIRENVCKAWSYGN-CDVSLSRGAAASYVASYVNSVASLPYLYTGH 140
W P LT +R K Y N C V+ + A A ++A + V LP Y
Sbjct 237 WKTGYVVAPPALTAELR----KVHQYVNFCGVTPLQYALADFMAEHPEHVEELPAFYQAK 292
Query 141 KEI 143
+++
Sbjct 293 RDL 295
> psk:U771_26230 aminotransferase
Length=382
Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 34/123 (28%), Positives = 52/123 (42%), Gaps = 13/123 (11%)
Query 30 SEWKLQIPVIRNRDFELFMKRLRSNLKQQGLP------HEEI--RYYCVSEYGPQTLRPH 81
+E L +IR+RD L + +L G+P HEE+ R + VS +G
Sbjct 177 AELDLLAALIRDRDIYLVSDEVYEHLVFDGVPHISVLAHEELYSRAFVVSSFGKTYHVTG 236
Query 82 WHLLLFFDSPQLTQAIRENVCKAWSYGN-CDVSLSRGAAASYVASYVNSVASLPYLYTGH 140
W P LT +R K Y N C V+ + A A ++A + V LP Y
Sbjct 237 WKTGYVVAPPALTAELR----KVHQYVNFCGVTPLQYALADFMAEHPEHVDELPAFYQAK 292
Query 141 KEI 143
+++
Sbjct 293 RDL 295
> bmy:Bm1_07705 hypothetical protein
Length=87
Score = 36.6 bits (83), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (51%), Gaps = 1/63 (2%)
Query 17 YSYSLRKVVYPPASEWKLQIPVIRNRDFELFMKRLRSNLKQQGLPHEEIRYYCVSEYGPQ 76
+ YSL VV +W ++ P N++F FMK L S +KQQ E IR + E
Sbjct 25 WYYSLPHVVDRFTXKWMIEEPERDNQEFHAFMKEL-STMKQQADHEELIRKVAIEEARRN 83
Query 77 TLR 79
TLR
Sbjct 84 TLR 86
> amg:AMEC673_00400 replication protein A
Length=547
Score = 38.5 bits (88), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 34/114 (30%), Positives = 52/114 (46%), Gaps = 18/114 (16%)
Query 28 PASEWKLQIPVIRNRDFELFMKRLRSNLKQQGLPHEEIRYYCVSEYGPQ-TLRPHWHLLL 86
P +W P RD + ++ + ++ + L I+ Y PQ PHWH+LL
Sbjct 290 PNPKWDGTTP----RDAQDYLNNIWRRIRAE-LDRRSIQQYGFRIAEPQHDGTPHWHMLL 344
Query 87 F--------FDSPQLTQAIRENVCKAWSYGN-CD---VSLSRGAAASYVASYVN 128
F F S A++E+ KA + N CD + SRG+A Y+A YV+
Sbjct 345 FINPIHSDPFKSVINHYALQEDGDKAGAQENRCDFKDIDYSRGSATGYIAKYVS 398
> vex:VEA_003288 replication protein
Length=514
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 18/93 (19%)
Query 49 KRLRSNLKQQGLPHEEIRYYCVSEYGPQ-TLRPHWHLLLFF---DSPQLTQAIR------ 98
K +RS L + G +R+Y PQ PHWHLLLF D +TQ +R
Sbjct 277 KLIRSKLNRLG-----VRFYGFRVAEPQHDGTPHWHLLLFVEAKDYETMTQTMREYSMRE 331
Query 99 ---ENVCKAWSYGNCDVSLSRGAAASYVASYVN 128
E + + + S+G+A Y+A Y++
Sbjct 332 DGDEKGAEQHRFTEVKIDPSKGSATGYIAKYIS 364
> ndi:NDAI_0F00320 NDAI0F00320; hypothetical protein
Length=307
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 19/106 (18%)
Query 130 VASLPYLYTGHKEIRPRCFHSKGFGQNKSFVNRPVF---QKFEKYPLTVLMELIVPLMVK 186
VA++ L+ GHK + + F FVN F + +KYP T M+ + ++V
Sbjct 31 VATMGCLHEGHKSLISQSLKDNEFTVVSIFVNPSQFAPTEDLDKYPRT--MDEDITMLVS 88
Query 187 LSSSGLHGRINILYSPDSLQLFARIHVMLCSYFLLRSQHQKGSYIT 232
L +NIL++P++ HVM L + Q+G ++T
Sbjct 89 LG-------VNILFAPNA-------HVMYPQGIPLNVEEQRGPFVT 120
> npa:UCRNP2_9887 putative fad binding domain protein
Length=366
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query 142 EIRPRCFHSKGFG----QNKSFVNRPVFQKFEKYPLTVLMELIVPLMVKLSSSGLHGRIN 197
E+ PR S+G G N SF+ P+ T ++LI+PL+ +L G+ +N
Sbjct 215 ELVPRITASRGMGIAAITNSSFLLTPL--TLPHVSGTGAIDLIMPLLTELDDQGVRYSLN 272
Query 198 ILYSPDSLQLFARI 211
I SP+ L+ + R+
Sbjct 273 ITESPNWLEYWTRL 286
> pfc:PflA506_4359 ybdL; aminotransferase YbdL (EC:2.6.1.-)
Length=382
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/115 (27%), Positives = 47/115 (41%), Gaps = 13/115 (11%)
Query 38 VIRNRDFELFMKRLRSNLKQQGLPHEEI--------RYYCVSEYGPQTLRPHWHLLLFFD 89
+IR+RD L + +L G+PH I R + VS +G W
Sbjct 185 LIRDRDIYLISDEVYEHLVFDGVPHVSILAHQELYQRAFVVSSFGKTYHVTGWKTGYVVA 244
Query 90 SPQLTQAIRENVCKAWSYGN-CDVSLSRGAAASYVASYVNSVASLPYLYTGHKEI 143
P LT +R K Y N C V+ + A A ++A + V LP Y +++
Sbjct 245 PPALTAELR----KVHQYVNFCGVTPLQYALADFMAEHPEHVDELPAFYQAKRDL 295
> cpt:CpB0227 hypothetical protein
Length=113
Score = 35.4 bits (80), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/43 (47%), Positives = 27/43 (63%), Gaps = 5/43 (12%)
Query 44 FELFMKRLRSNLKQQGLPHEEIRYYCVSEYGPQTLRPHWHLLL 86
+LF+KRLR + PH+ IRY+ YG + RPH+HLLL
Sbjct 75 LQLFLKRLRKMIS----PHK-IRYFECGAYGTKLQRPHYHLLL 112
> cpj:CPj0222 hypothetical protein
Length=113
Score = 35.4 bits (80), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/43 (47%), Positives = 27/43 (63%), Gaps = 5/43 (12%)
Query 44 FELFMKRLRSNLKQQGLPHEEIRYYCVSEYGPQTLRPHWHLLL 86
+LF+KRLR + PH+ IRY+ YG + RPH+HLLL
Sbjct 75 LQLFLKRLRKMIS----PHK-IRYFECGAYGTKLQRPHYHLLL 112
> cpa:CP0543 hypothetical protein
Length=113
Score = 35.4 bits (80), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/43 (47%), Positives = 27/43 (63%), Gaps = 5/43 (12%)
Query 44 FELFMKRLRSNLKQQGLPHEEIRYYCVSEYGPQTLRPHWHLLL 86
+LF+KRLR + PH+ IRY+ YG + RPH+HLLL
Sbjct 75 LQLFLKRLRKMIS----PHK-IRYFECGAYGTKLQRPHYHLLL 112
> cpn:CPn0222 hypothetical protein
Length=113
Score = 35.4 bits (80), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/43 (47%), Positives = 27/43 (63%), Gaps = 5/43 (12%)
Query 44 FELFMKRLRSNLKQQGLPHEEIRYYCVSEYGPQTLRPHWHLLL 86
+LF+KRLR + PH+ IRY+ YG + RPH+HLLL
Sbjct 75 LQLFLKRLRKMIS----PHK-IRYFECGAYGTKLQRPHYHLLL 112
> mmaz:MmTuc01_1822 Glutamate-1-semialdehyde aminotransferase
Length=420
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (48%), Gaps = 17/96 (18%)
Query 68 YCVSEYGPQTLRPHWHLLLFFDSPQLTQAIRENVCKAWSYGN---CDVSLSRGAAASYVA 124
YC++ YGP L H H P + +AIR+ + + W YG +V+L A VA
Sbjct 58 YCLA-YGPAVLG-HNH-------PVIKEAIRQQLDRGWLYGTPTELEVTL-----AEKVA 103
Query 125 SYVNSVASLPYLYTGHKEIRPRCFHSKGFGQNKSFV 160
SY S+ L ++ TG + ++GF + F+
Sbjct 104 SYYPSIDMLRFVSTGTEATMSALRLARGFTRRNKFI 139
> mma:MM_1743 glutamate-1-semialdehyde aminotransferase (EC:5.4.3.8)
Length=424
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (48%), Gaps = 17/96 (18%)
Query 68 YCVSEYGPQTLRPHWHLLLFFDSPQLTQAIRENVCKAWSYGN---CDVSLSRGAAASYVA 124
YC++ YGP L H H P + +AIR+ + + W YG +V+L A VA
Sbjct 58 YCLA-YGPAILG-HNH-------PVIKEAIRQQLDRGWLYGTPTELEVTL-----AEKVA 103
Query 125 SYVNSVASLPYLYTGHKEIRPRCFHSKGFGQNKSFV 160
SY S+ L ++ TG + ++GF + F+
Sbjct 104 SYYPSIDMLRFVSTGTEATMSALRLARGFTRRNKFI 139
> sers:SERRSCBI_07805 replication protein A
Length=283
Score = 36.2 bits (82), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 29/91 (32%), Positives = 43/91 (47%), Gaps = 14/91 (15%)
Query 45 ELFMKRLRSNLKQQGLPHEEIRYYCVSEYGPQTLRPHWHLLLFFDSPQLTQ--------A 96
+LF K +R+ K GL +R V + T PHWH++LF Q Q A
Sbjct 64 KLFSK-IRTAFKDAGLQAYGVR--VVEPHHDAT--PHWHMMLFTSKKQRQQVIDIMRRYA 118
Query 97 IRENVCKAWSYGNCDVSLSRGAAASYVASYV 127
E+ A + +C L++G AA Y+A Y+
Sbjct 119 TAEDGDAAKNRFDCK-HLNKGGAAGYIAKYI 148
> mmk:MU9_2817 hypothetical protein
Length=770
Score = 36.6 bits (83), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/59 (34%), Positives = 27/59 (46%), Gaps = 10/59 (17%)
Query 80 PHWHLLLFFDSPQLTQAIRENVCKAWSYGNCDVS----------LSRGAAASYVASYVN 128
PHWHLLLF D Q I KA + + ++RG A SY+A Y++
Sbjct 383 PHWHLLLFTDKASRAQVIDIMRKKALAVDGKEQGAQKHRFKCEHMNRGGAVSYIAKYIS 441
> mac:MA0581 hemL; glutamate-1-semialdehyde aminotransferase (EC:5.4.3.8)
Length=424
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 44/96 (46%), Gaps = 17/96 (18%)
Query 68 YCVSEYGPQTLRPHWHLLLFFDSPQLTQAIRENVCKAWSYGN---CDVSLSRGAAASYVA 124
YC++ YGP L H H P + AI+E + K W YG +V+L A VA
Sbjct 58 YCLA-YGPAVLG-HNH-------PVIKAAIKEQLDKGWLYGTPTELEVTL-----AEKVA 103
Query 125 SYVNSVASLPYLYTGHKEIRPRCFHSKGFGQNKSFV 160
Y S+ L ++ TG + ++GF + F+
Sbjct 104 GYYPSIDMLRFVSTGTEATMSALRLARGFTRKNKFI 139
> ppuu:PputUW4_00944 aminotransferase (EC:2.6.1.-)
Length=382
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 31/115 (27%), Positives = 49/115 (43%), Gaps = 13/115 (11%)
Query 38 VIRNRDFELFMKRLRSNLKQQGLP------HEEI--RYYCVSEYGPQTLRPHWHLLLFFD 89
+IR+RD + + +L G+P HEE+ R + VS +G W
Sbjct 185 LIRDRDIYVISDEVYEHLVYDGVPHVSVLAHEELYQRAFVVSSFGKTYHVTGWKTGYVVA 244
Query 90 SPQLTQAIRENVCKAWSYGN-CDVSLSRGAAASYVASYVNSVASLPYLYTGHKEI 143
P LT +R K Y N C V+ + A A ++A + V LP Y +++
Sbjct 245 PPALTAELR----KVHQYVNFCGVTPLQYALADFMAEHPEHVEELPDFYQAKRDL 295
> vvu:VV1_2465 replication protein
Length=511
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 32/124 (26%), Positives = 49/124 (40%), Gaps = 21/124 (17%)
Query 18 SYSLRKVVYPPASEWKLQIPVIRNRDFELFMKRLRSNLKQQGLPHEEIRYYCVSEYGPQ- 76
SYS V P +W P+ K +RS L + G +R+Y PQ
Sbjct 246 SYSTSGQVNP---KWAGHTPLDGQTYLNDIWKLMRSTLNRLG-----VRFYGFRVAEPQH 297
Query 77 TLRPHWHLLLFFDSPQ---LTQAIR---------ENVCKAWSYGNCDVSLSRGAAASYVA 124
PHWHLLLF + + Q +R E + + ++G+A Y+A
Sbjct 298 DGTPHWHLLLFVEPKHYDLMVQTMRDYAMREDGEEKGATEHRFTEVKIDPAKGSATGYIA 357
Query 125 SYVN 128
Y++
Sbjct 358 KYIS 361
> sang:SAIN_1071 hypothetical protein
Length=288
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 57/130 (44%), Gaps = 22/130 (17%)
Query 42 RDFELFMKRLRSNLKQQGLPHEEIRYYCVSEYGPQTLRPHWHLLLFFDSPQLTQAIRENV 101
RD+ KRLR+ LK Q + + +Y V+E ++ R H+H L SP LT+A
Sbjct 86 RDYPYAKKRLRAWLKYQREKYGKFQYIFVAELH-KSGRIHFHGLTAGFSPPLTEARSPKT 144
Query 102 -------------CKAWSYGNCDVS--LSRGAAASYVASYVN-SVASLPYLYTGHKEIRP 145
+ W G VS R A+Y++ Y+ + ++P Y +P
Sbjct 145 NRLIKKKGLQIYNAETWKNGFSTVSKIQDREKTANYISKYITKELMAIPSGYH-----QP 199
Query 146 RCFHSKGFGQ 155
R F S+G Q
Sbjct 200 RYFVSRGLNQ 209
> ppz:H045_16130 methionine aminotransferase
Length=382
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 48/115 (42%), Gaps = 13/115 (11%)
Query 38 VIRNRDFELFMKRLRSNLKQQGLPHEEI--------RYYCVSEYGPQTLRPHWHLLLFFD 89
+IR+RD L + +L G+PH + R + VS +G W
Sbjct 185 LIRDRDIYLLSDEVYEHLVFDGVPHVSVLAHAELYPRAFVVSSFGKTYHVTGWKTGYVVA 244
Query 90 SPQLTQAIRENVCKAWSYGN-CDVSLSRGAAASYVASYVNSVASLPYLYTGHKEI 143
P LT +R K Y N C V+ + A A ++A++ V LP Y +++
Sbjct 245 PPALTVELR----KVHQYVNFCCVTPLQFALADFMAAHPEHVDELPAFYQAKRDL 295
> vvy:VV1773 hypothetical protein
Length=514
Score = 35.4 bits (80), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 32/124 (26%), Positives = 49/124 (40%), Gaps = 21/124 (17%)
Query 18 SYSLRKVVYPPASEWKLQIPVIRNRDFELFMKRLRSNLKQQGLPHEEIRYYCVSEYGPQ- 76
SYS V P +W P+ K +RS L + G +R+Y PQ
Sbjct 249 SYSTSGQVNP---KWAGHTPLDGQTYLNDIWKLMRSTLNRLG-----VRFYGFRVAEPQH 300
Query 77 TLRPHWHLLLFFDSPQ---LTQAIR---------ENVCKAWSYGNCDVSLSRGAAASYVA 124
PHWHLLLF + + Q +R E + + ++G+A Y+A
Sbjct 301 DGTPHWHLLLFVEPKHYDLMVQIMRDYAMREDREEKGATEHRFTEVKIDPAKGSATGYIA 360
Query 125 SYVN 128
Y++
Sbjct 361 KYIS 364
Lambda K H a alpha
0.324 0.139 0.428 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 323150458288