bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: all_orgs
14,240,465 sequences; 5,121,972,263 total letters
Query= Contig-36_CDS_annotation_glimmer3.pl_2_4
Length=92
Score E
Sequences producing significant alignments: (Bits) Value
maw:MAC_05888 dynamin GTPase, putative 33.9 3.6
msc:BN69_0161 hypothetical protein 33.5 5.0
crn:CAR_c17320 hypothetical protein 32.3 6.3
api:100165002 uncharacterized LOC100165002 32.7 7.5
tbr:Tb11.02.0030 dynein heavy chain 32.7 7.7
tpx:Turpa_2721 carboxyl transferase 32.3 9.6
> maw:MAC_05888 dynamin GTPase, putative
Length=559
Score = 33.9 bits (76), Expect = 3.6, Method: Composition-based stats.
Identities = 21/66 (32%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query 2 IKKQLKTKAMKVYQVLKVTKEGQYLVKTCPMLKSAISRAKETVANTDVAPAEY--QCVKK 59
I+ L + +MK Y++L+ EG Y S SR + TV T+ A Y Q +
Sbjct 366 IRAYLTSLSMKFYELLQAAMEGNYHSIDAEFFDSTDSRLRATVQETNTKFAAYMRQSGQA 425
Query 60 RKLENG 65
RK++ G
Sbjct 426 RKIKTG 431
> msc:BN69_0161 hypothetical protein
Length=3657
Score = 33.5 bits (75), Expect = 5.0, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Query 40 AKETVANTDVAPAEYQCVKKRKLENGYFYASVRLMHDGYAIDAE 83
K +N D AP+E + + L G+F AS++++ DG +DA+
Sbjct 2174 GKTAASNKDAAPSE----ESKDLTPGFFSASMQMLKDGKLVDAK 2213
> crn:CAR_c17320 hypothetical protein
Length=129
Score = 32.3 bits (72), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query 15 QVLKVTKEGQYLVKTCPMLKSAISRAKETVANTDVAPAEYQCVKKRKLEN 64
++LK+T EG +++ P+L S S +K+ + TD Y+ + KR N
Sbjct 63 RLLKITNEGDFIINDQPILGSITSISKQQLVFTD--HYGYELIAKRHQNN 110
> api:100165002 uncharacterized LOC100165002
Length=1148
Score = 32.7 bits (73), Expect = 7.5, Method: Composition-based stats.
Identities = 16/54 (30%), Positives = 25/54 (46%), Gaps = 0/54 (0%)
Query 39 RAKETVANTDVAPAEYQCVKKRKLENGYFYASVRLMHDGYAIDAEIWKTQVHHE 92
R + V N V +E CV+ + N + Y +R + +G ID K Q H +
Sbjct 557 RYRYDVRNAQVPHSEGLCVEVNNMSNPFSYGDIRKLFEGIHIDGSAIKIQKHRQ 610
> tbr:Tb11.02.0030 dynein heavy chain
Length=4307
Score = 32.7 bits (73), Expect = 7.7, Method: Composition-based stats.
Identities = 15/63 (24%), Positives = 36/63 (57%), Gaps = 0/63 (0%)
Query 15 QVLKVTKEGQYLVKTCPMLKSAISRAKETVANTDVAPAEYQCVKKRKLENGYFYASVRLM 74
++L++++EG+ ++K C L A +R+ + V+N + + + LE+ +A +L+
Sbjct 613 ELLRISEEGEGVIKACEKLIKATTRSMQVVSNYNTVQRQIIHCTRSMLESASNHALSQLL 672
Query 75 HDG 77
+ G
Sbjct 673 YKG 675
> tpx:Turpa_2721 carboxyl transferase
Length=555
Score = 32.3 bits (72), Expect = 9.6, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 30/57 (53%), Gaps = 7/57 (12%)
Query 34 KSAISRAKETVANTDVAPAEYQCVKKRK-------LENGYFYASVRLMHDGYAIDAE 83
+SAI+ AK++ TD A E + + RK ++G +Y+S RL DG AE
Sbjct 472 QSAIAEAKKSGKETDKAKLEAELAEIRKKISAQFEAQSGAYYSSARLWDDGVITPAE 528
Lambda K H a alpha
0.317 0.129 0.370 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 127171902990