bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: all_orgs
14,240,465 sequences; 5,121,972,263 total letters
Query= Contig-8_CDS_annotation_glimmer3.pl_2_7
Length=322
Score E
Sequences producing significant alignments: (Bits) Value
fch:102052261 FBLN1; fibulin 1 42.0
fpg:101922431 FBLN1; fibulin 1 42.0
sri:SELR_11130 hypothetical protein 39.7 0.62
sapi:SAPIS_v1c04090 ATP-dependent RNA helicase 38.5 1.5
lgv:LCGL_0019 hypothetical protein 38.1 1.8
lgr:LCGT_0019 hypothetical protein 38.1 1.8
plv:ERIC2_c26190 pbpF2; penicillin-binding protein 1F 38.5 1.9
sdi:SDIMI_v3c03460 ATP-dependent RNA helicase 38.1 2.6
msa:Mycsm_06634 hypothetical protein 35.0 6.7
stai:STAIW_v1c03950 ATP-dependent RNA helicase 36.2 9.5
> fch:102052261 FBLN1; fibulin 1
Length=1068
Score = 42.0 bits (97), Expect = 0.19, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 56/118 (47%), Gaps = 19/118 (16%)
Query 176 YKNKIFTEKEREKMWINNLNRGLIWIYGEKVKADDWKTIDNLRAYWQKYGCEVMGDNPIA 235
Y ++ +KE+ ++W+ R DWK N A QK+ ++ N I
Sbjct 118 YDQRMKFQKEQMRVWLLQQQR-------------DWK---NALAD-QKFADDLYDKNRIE 160
Query 236 WN--AMKERRKEEKQRRAVALAKKQAEKFSTENLIEELPLQADFPMQEEKQEWDKLIE 291
+ M+++RKEE+ RRAV +A K + L E+ L+ D M+++ E L++
Sbjct 161 LDQKTMEQQRKEEENRRAVCVATKDFNRTQAAELAEKKKLEKDQKMKDDMDEISGLLQ 218
> fpg:101922431 FBLN1; fibulin 1
Length=1068
Score = 42.0 bits (97), Expect = 0.19, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 56/118 (47%), Gaps = 19/118 (16%)
Query 176 YKNKIFTEKEREKMWINNLNRGLIWIYGEKVKADDWKTIDNLRAYWQKYGCEVMGDNPIA 235
Y ++ +KE+ ++W+ R DWK N A QK+ ++ N I
Sbjct 118 YDQRMKFQKEQMRVWLLQQQR-------------DWK---NALAD-QKFADDLYDKNRIE 160
Query 236 WN--AMKERRKEEKQRRAVALAKKQAEKFSTENLIEELPLQADFPMQEEKQEWDKLIE 291
+ M+++RKEE+ RRAV +A K + L E+ L+ D M+++ E L++
Sbjct 161 LDQKTMEQQRKEEENRRAVCVATKDFNRTQAAELAEKKKLEKDQKMKDDMDEISGLLQ 218
> sri:SELR_11130 hypothetical protein
Length=288
Score = 39.7 bits (91), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 45/103 (44%), Gaps = 12/103 (12%)
Query 11 YFTTLTISPEGIKEIEEKTGLKWEENPNEI--ATKGLRLFLERV---RKETG-KSIKHWC 64
YF L +S ++ E P ++ A K + ++ R+ R + G S+++ C
Sbjct 61 YFEALVLSNFHKDDLHVTVTYDDENRPADLKMAMKAVENYIRRLNYTRSKAGLSSVRYVC 120
Query 65 VTELGEKKDRIHLHGIFFGQKSAELIRKHWKYGFVFIGGYCNS 107
VTE G RIH H I G + + K W GYCN+
Sbjct 121 VTEEGATNGRIHHHFIMDGDLDRDTVEKRWGL------GYCNA 157
> sapi:SAPIS_v1c04090 ATP-dependent RNA helicase
Length=454
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/83 (28%), Positives = 42/83 (51%), Gaps = 3/83 (4%)
Query 140 GYMDRLDYLWQKQNYKNINVATY--TFRNGTKMAMPKYYKNKIFTEKEREKMWINNLNRG 197
G++D LD++ K N +N++++ + T NG K + KY IF E +K N+
Sbjct 161 GFIDELDFILSKMN-ENVSISLFSATISNGLKPFLSKYLSKAIFIESTEKKPSNKNIEHV 219
Query 198 LIWIYGEKVKADDWKTIDNLRAY 220
L+W ++ K +D++ Y
Sbjct 220 LVWTKNKENKDVLKIIVDSINPY 242
> lgv:LCGL_0019 hypothetical protein
Length=280
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 60/143 (42%), Gaps = 46/143 (32%)
Query 5 LHSSFGYFTTLTISPEGIK----EIEEKTGLKWEENPNEIATKGLRLFLERVRKETGKSI 60
L + F YF TLTI P+ EI ++T LKW R +++T
Sbjct 71 LANDFKYFVTLTIDPKKRDSLDYEIAKQTLLKW----------------CRAQRKTKGKF 114
Query 61 KHWCVTELGEKKDRIHLHGIFFGQ--------------KSAELIRKH---------WKYG 97
+ V E K R+H HG+ GQ K+ E++ +H W+YG
Sbjct 115 DYIFVPEF-HKSGRVHFHGV-IGQPEYRSFTLTEATNPKTGEILIRHNRQVLELKEWRYG 172
Query 98 FVFIGGYCN-SRSVNYITKYMLK 119
F + + R+ +Y+TKY+ K
Sbjct 173 FTDVTPIEDKERTSSYMTKYISK 195
> lgr:LCGT_0019 hypothetical protein
Length=280
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 60/143 (42%), Gaps = 46/143 (32%)
Query 5 LHSSFGYFTTLTISPEGIK----EIEEKTGLKWEENPNEIATKGLRLFLERVRKETGKSI 60
L + F YF TLTI P+ EI ++T LKW R +++T
Sbjct 71 LANDFKYFVTLTIDPKKRDSLDYEIAKQTLLKW----------------CRAQRKTKGKF 114
Query 61 KHWCVTELGEKKDRIHLHGIFFGQ--------------KSAELIRKH---------WKYG 97
+ V E K R+H HG+ GQ K+ E++ +H W+YG
Sbjct 115 DYIFVPEF-HKSGRVHFHGV-IGQPEYRSFTLTEATNPKTGEILIRHNRQVLELKEWRYG 172
Query 98 FVFIGGYCN-SRSVNYITKYMLK 119
F + + R+ +Y+TKY+ K
Sbjct 173 FTDVTPIEDKERTSSYMTKYISK 195
> plv:ERIC2_c26190 pbpF2; penicillin-binding protein 1F
Length=810
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 34/133 (26%), Positives = 61/133 (46%), Gaps = 5/133 (4%)
Query 164 FRNGTKMAMPKYYKNKIFTEKEREKMWINNLNRGLIWIYGEKVKADDWKTIDNLR--AYW 221
FR GT++++ +N +++ E +M++N + G +G K A + +DNL W
Sbjct 159 FRKGTEVSIALALEN-TYSKDEILEMYLNRIFLGQ-RSFGIKAAAKTYFGVDNLNDLQLW 216
Query 222 QKYGCEVMGDNPIAWNAMKERRKEEKQRRAVALAKKQAEKFSTENLIEELPLQADFPMQE 281
Q + P A+N + K K+RR V L + + T+ + P +
Sbjct 217 QMATLAALPKGPSAYNPISNPEKS-KERRGVVLKLMADQGYITQEECAQAAAVDYVPPKV 275
Query 282 EKQEWDKLIEKYI 294
EKQ+ D L + Y+
Sbjct 276 EKQDQDGLYQAYL 288
> sdi:SDIMI_v3c03460 ATP-dependent RNA helicase
Length=455
Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (54%), Gaps = 3/63 (5%)
Query 140 GYMDRLDYLWQKQNYKNINVATY--TFRNGTKMAMPKYYKNKIFTEKEREKMWINNLNRG 197
G+++ +D++ K N K++NV+ + T NG K + KY N IF E + N+
Sbjct 162 GFIEEVDFMLSKIN-KDVNVSLFSATINNGLKPFLQKYLSNSIFIENKDSNPTNKNIEHV 220
Query 198 LIW 200
LIW
Sbjct 221 LIW 223
> msa:Mycsm_06634 hypothetical protein
Length=136
Score = 35.0 bits (79), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 23/40 (58%), Gaps = 1/40 (3%)
Query 27 EKTGLKWEENPNEIATKGLR-LFLERVRKETGKSIKHWCV 65
E TG W + P+ + LR +F++ R E GK ++HW +
Sbjct 82 ETTGFHWSDEPDPVDPASLRHVFMDIFRVENGKLVEHWDI 121
> stai:STAIW_v1c03950 ATP-dependent RNA helicase
Length=455
Score = 36.2 bits (82), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (5%)
Query 140 GYMDRLDYLWQKQNYKNINVATY--TFRNGTKMAMPKYYKNKIFTEKEREKMWINNLNRG 197
G++D +D+L K N K++N++ + T N K + KY N IF E + N+
Sbjct 162 GFIDEVDFLISKIN-KDVNISLFSATINNSIKPFLRKYLSNSIFIENIDKNPTNKNIEHV 220
Query 198 LIW 200
LIW
Sbjct 221 LIW 223
Lambda K H a alpha
0.318 0.135 0.416 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 575086215924