bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-10_CDS_annotation_glimmer3.pl_2_6
Length=164
Score E
Sequences producing significant alignments: (Bits) Value
Alpavirinae_Human_gut_33_017_Microviridae_AG0155_hypothetical.p... 229 2e-78
Alpavirinae_Human_gut_22_017_Microviridae_AG0398_hypothetical.p... 89.0 5e-25
Alpavirinae_Human_feces_D_031_Microviridae_AG0422_hypothetical.... 45.4 1e-08
Alpavirinae_Human_feces_C_043_Microviridae_AG0323_hypothetical.... 33.1 1e-04
Alpavirinae_Human_gut_33_005_Microviridae_AG0181_hypothetical.p... 27.7 0.032
Alpavirinae_Human_feces_A_021_Microviridae_AG078_hypothetical.p... 25.4 0.064
Gokush_Bourget_164_Microviridae_AG048_putative.VP3 24.3 0.37
Gokush_Bourget_224_Microviridae_AG0244_putative.VP3 24.3 0.40
Gokush_Bourget_245_Microviridae_AG082_putative.VP3 23.1 0.96
Gokush_Pavin_110_Microviridae_AG050_putative.VP3 22.7 1.3
> Alpavirinae_Human_gut_33_017_Microviridae_AG0155_hypothetical.protein
Length=171
Score = 229 bits (583), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 122/138 (88%), Positives = 130/138 (94%), Gaps = 0/138 (0%)
Query 1 MIGKFNSLSSLEQGSGLIPNVEPDAFAVAPKFDSTEQLRVEIDDTDETRPVRYTSDVCLI 60
MIGKFN+L+SLEQGSGL PNVEPDAFAVAP FDSTEQLRVEIDDTD +RPVRYTSD+ LI
Sbjct 12 MIGKFNTLNSLEQGSGLSPNVEPDAFAVAPNFDSTEQLRVEIDDTDASRPVRYTSDIRLI 71
Query 61 LHTKDLASRAGLAVASKFGqskqpisqiqqiMDTMSDEDLLATIRSRYIQSPSEIIAWSK 120
LH KDLASRAG+ VASKFGQSKQ SQIQQIMDTMSDEDLLAT+RSRYIQSPSEI+AWSK
Sbjct 72 LHNKDLASRAGVDVASKFGQSKQSPSQIQQIMDTMSDEDLLATVRSRYIQSPSEILAWSK 131
Query 121 ELSAYAENLESQAQELID 138
ELSAYAENLESQAQELI+
Sbjct 132 ELSAYAENLESQAQELIE 149
> Alpavirinae_Human_gut_22_017_Microviridae_AG0398_hypothetical.protein
Length=69
Score = 89.0 bits (219), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 42/47 (89%), Positives = 47/47 (100%), Gaps = 0/47 (0%)
Query 92 MDTMSDEDLLATIRSRYIQSPSEIIAWSKELSAYAENLESQAQELID 138
MDTMSD+DLLAT+RSR+IQ+PSEIIAWSKELSAYAE+LESQAQELID
Sbjct 1 MDTMSDDDLLATVRSRHIQAPSEIIAWSKELSAYAEHLESQAQELID 47
> Alpavirinae_Human_feces_D_031_Microviridae_AG0422_hypothetical.protein
Length=150
Score = 45.4 bits (106), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 54/106 (51%), Gaps = 5/106 (5%)
Query 27 AVAPKFDSTEQLRVEIDDTDETRPVRYTSDVCLILHTKDLASRAGLAVASKFGqskqpis 86
A+ + E LR DD +RY SDV L+++ + L ++ G S +
Sbjct 25 AIYCQVGPVEMLRYVKDDDG---VIRYVSDVNLLMNAERLRNQIG--EESYLNLIRGIQP 79
Query 87 qiqqiMDTMSDEDLLATIRSRYIQSPSEIIAWSKELSAYAENLESQ 132
+ + +DE L I+SR+IQ+PSE++AW + L + +++ S+
Sbjct 80 KKSPYDNKYTDEQLFTAIKSRFIQTPSEVLAWIESLGSAGDSIRSE 125
> Alpavirinae_Human_feces_C_043_Microviridae_AG0323_hypothetical.protein
Length=59
Score = 33.1 bits (74), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 15/37 (41%), Positives = 25/37 (68%), Gaps = 0/37 (0%)
Query 101 LATIRSRYIQSPSEIIAWSKELSAYAENLESQAQELI 137
+ TI+SRY+QSPSE+ AW + L A+ + S + ++
Sbjct 1 METIKSRYLQSPSEVRAWLETLVDKADVVRSDYETIV 37
> Alpavirinae_Human_gut_33_005_Microviridae_AG0181_hypothetical.protein
Length=205
Score = 27.7 bits (60), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 15/43 (35%), Positives = 24/43 (56%), Gaps = 0/43 (0%)
Query 96 SDEDLLATIRSRYIQSPSEIIAWSKELSAYAENLESQAQELID 138
+D+ LL + R IQS +E+ +W L + ++LES Q D
Sbjct 141 NDDFLLDYCKDRNIQSATEMASWLDHLLSEGQSLESDLQAYAD 183
> Alpavirinae_Human_feces_A_021_Microviridae_AG078_hypothetical.protein
Length=63
Score = 25.4 bits (54), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 11/38 (29%), Positives = 26/38 (68%), Gaps = 0/38 (0%)
Query 101 LATIRSRYIQSPSEIIAWSKELSAYAENLESQAQELID 138
++ I+ R +QS +E+ AWS+ L+ A+ ++++ + I+
Sbjct 1 MSLIKPRNVQSHAELKAWSEFLTDKAKEIQTEYETYIE 38
> Gokush_Bourget_164_Microviridae_AG048_putative.VP3
Length=132
Score = 24.3 bits (51), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 3/35 (9%)
Query 96 SDEDLL---ATIRSRYIQSPSEIIAWSKELSAYAE 127
+DE+ + A +RSR+ SP E + + + + Y E
Sbjct 78 ADENFMRMDAKVRSRFHNSPQEFLEFFADPANYDE 112
> Gokush_Bourget_224_Microviridae_AG0244_putative.VP3
Length=140
Score = 24.3 bits (51), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 3/35 (9%)
Query 96 SDEDLL---ATIRSRYIQSPSEIIAWSKELSAYAE 127
+DE+ + A +RSR+ SP E + + + + Y E
Sbjct 78 ADENFMRMDAKVRSRFHNSPQEFLEFFADSANYDE 112
> Gokush_Bourget_245_Microviridae_AG082_putative.VP3
Length=143
Score = 23.1 bits (48), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 14/38 (37%), Positives = 20/38 (53%), Gaps = 7/38 (18%)
Query 96 SDEDLL---ATIRSRYIQSPSEIIAWSKELSAYAENLE 130
+DE+ + A IR+R+ SP E + E A EN E
Sbjct 82 ADENFMRMDAKIRARFNNSPQEFL----EFFANTENTE 115
> Gokush_Pavin_110_Microviridae_AG050_putative.VP3
Length=132
Score = 22.7 bits (47), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 9/26 (35%), Positives = 16/26 (62%), Gaps = 3/26 (12%)
Query 96 SDEDLL---ATIRSRYIQSPSEIIAW 118
+DE+ + A +RSR+ SP E + +
Sbjct 78 ADENFMRMDAKVRSRFHNSPQEFLEF 103
Lambda K H a alpha
0.312 0.128 0.349 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 11402682