bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-11_CDS_annotation_glimmer3.pl_2_1
Length=77
Score E
Sequences producing significant alignments: (Bits) Value
Alpavirinae_Human_feces_A_048_Microviridae_AG090_hypothetical.p... 157 5e-50
Alpavirinae_Human_feces_B_021_Microviridae_AG0370_hypothetical.... 152 8e-48
Alpavirinae_Human_feces_A_047_Microviridae_AG0315_putative.VP2 135 1e-41
Alpavirinae_Human_gut_31_037_Microviridae_AG0294_putative.VP2 41.2 2e-07
Alpavirinae_Human_feces_B_020_Microviridae_AG0353_putative.gpH 35.4 2e-05
Pichovirinae_Pavin_279_Microviridae_AG0271_putative.VP1 23.1 0.37
Gokush_Bourget_154_Microviridae_AG0428_putative.VP3 22.7 0.45
Gokush_Human_feces_B_068_Microviridae_AG0329_putative.AF306496_... 21.9 0.67
Alpavirinae_Human_feces_B_020_Microviridae_AG0354_hypothetical.... 20.4 2.2
Alpavirinae_Human_feces_A_021_Microviridae_AG079_hypothetical.p... 20.8 2.3
> Alpavirinae_Human_feces_A_048_Microviridae_AG090_hypothetical.protein.BACPLE.00802
Length=333
Score = 157 bits (398), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 73/77 (95%), Positives = 76/77 (99%), Gaps = 0/77 (0%)
Query 1 MMGMKDLDRKDRELIKDWIYEGIHAGKEISGEILNWLMRGTPKTITEITSRLEEMFDAKG 60
MMGMKDLDRKDRELIKDWIYEG+HAGKEISGEILNW+MRG PKTITE+TSRLEEMFDAKG
Sbjct 257 MMGMKDLDRKDRELIKDWIYEGVHAGKEISGEILNWVMRGAPKTITEVTSRLEEMFDAKG 316
Query 61 NETGSKMVKQTITKGAK 77
NETGSKMVKQTITKGAK
Sbjct 317 NETGSKMVKQTITKGAK 333
> Alpavirinae_Human_feces_B_021_Microviridae_AG0370_hypothetical.protein.BACPLE.00802
Length=333
Score = 152 bits (383), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 69/77 (90%), Positives = 75/77 (97%), Gaps = 0/77 (0%)
Query 1 MMGMKDLDRKDRELIKDWIYEGIHAGKEISGEILNWLMRGTPKTITEITSRLEEMFDAKG 60
MMGMKDLDRKDRELIKDWIYEG+HAGKEISGEILNW+MRG PKTITE+TSRLEE+FDAKG
Sbjct 257 MMGMKDLDRKDRELIKDWIYEGVHAGKEISGEILNWVMRGAPKTITEVTSRLEELFDAKG 316
Query 61 NETGSKMVKQTITKGAK 77
N+ GSKMVKQTITKGA+
Sbjct 317 NKAGSKMVKQTITKGAE 333
> Alpavirinae_Human_feces_A_047_Microviridae_AG0315_putative.VP2
Length=325
Score = 135 bits (340), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 60/77 (78%), Positives = 70/77 (91%), Gaps = 0/77 (0%)
Query 1 MMGMKDLDRKDRELIKDWIYEGIHAGKEISGEILNWLMRGTPKTITEITSRLEEMFDAKG 60
M+G++DLDRKDRELIKDWIYEGIHAGKEISGEILNWLMRG PKTI EIT R+EEMFD++G
Sbjct 249 MIGIRDLDRKDRELIKDWIYEGIHAGKEISGEILNWLMRGAPKTIAEITGRIEEMFDSEG 308
Query 61 NETGSKMVKQTITKGAK 77
N+ GSK ++QT+TK K
Sbjct 309 NQIGSKTIQQTVTKTTK 325
> Alpavirinae_Human_gut_31_037_Microviridae_AG0294_putative.VP2
Length=360
Score = 41.2 bits (95), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 15/23 (65%), Positives = 21/23 (91%), Gaps = 0/23 (0%)
Query 4 MKDLDRKDRELIKDWIYEGIHAG 26
M +LD K+R+L+KDWIY+G+HAG
Sbjct 287 MGELDIKERQLLKDWIYQGVHAG 309
> Alpavirinae_Human_feces_B_020_Microviridae_AG0353_putative.gpH
Length=352
Score = 35.4 bits (80), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/67 (30%), Positives = 37/67 (55%), Gaps = 6/67 (9%)
Query 5 KDLDRKDRELIKDWIYEGIHA---GKEISGEILNWLMRGTPKTITEITSRLEEMFDAKGN 61
K LD++ ++++WI+E + + E +G+I++ + K ++ EE+FDAKG
Sbjct 282 KKLDQEQERILQNWIFESVKSLCTVAETTGDIISMFRKPIQKVGEKV---FEEIFDAKGK 338
Query 62 ETGSKMV 68
G K V
Sbjct 339 SKGFKEV 345
> Pichovirinae_Pavin_279_Microviridae_AG0271_putative.VP1
Length=503
Score = 23.1 bits (48), Expect = 0.37, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 17/30 (57%), Gaps = 0/30 (0%)
Query 42 PKTITEITSRLEEMFDAKGNETGSKMVKQT 71
P + EITS ++ + + +GN TG Q+
Sbjct 316 PVVVQEITSTVKGIEEPQGNPTGKATSLQS 345
> Gokush_Bourget_154_Microviridae_AG0428_putative.VP3
Length=135
Score = 22.7 bits (47), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 8/18 (44%), Positives = 13/18 (72%), Gaps = 0/18 (0%)
Query 57 DAKGNETGSKMVKQTITK 74
DA+ NETG K + ++T+
Sbjct 11 DARSNETGLKCLDSSLTQ 28
> Gokush_Human_feces_B_068_Microviridae_AG0329_putative.AF306496_8.Vp5
Length=97
Score = 21.9 bits (45), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 17/33 (52%), Gaps = 1/33 (3%)
Query 10 KDRELIKDWIYEGIHAGKEISGEILNWLMRGTP 42
D L + +Y+ G+ I E+ +LMRG P
Sbjct 47 SDYSLYRLGLYDS-DTGRLIVDEVPTFLMRGEP 78
> Alpavirinae_Human_feces_B_020_Microviridae_AG0354_hypothetical.protein
Length=80
Score = 20.4 bits (41), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 5/17 (29%), Positives = 10/17 (59%), Gaps = 0/17 (0%)
Query 15 IKDWIYEGIHAGKEISG 31
K W++ +H G+ + G
Sbjct 13 FKRWLWHNLHTGETLEG 29
> Alpavirinae_Human_feces_A_021_Microviridae_AG079_hypothetical.protein.BACEGG.02723
Length=397
Score = 20.8 bits (42), Expect = 2.3, Method: Composition-based stats.
Identities = 11/24 (46%), Positives = 14/24 (58%), Gaps = 3/24 (13%)
Query 42 PKTITEITSRLEEMFDAKGNETGS 65
PK T T+ E FDA+GN G+
Sbjct 369 PKLKTRTTT---EKFDAEGNHIGT 389
Lambda K H a alpha
0.314 0.133 0.381 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 3612480