bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: Microviridae_proteins.fasta
           575 sequences; 147,441 total letters





Query= Contig-12_CDS_annotation_glimmer3.pl_2_6

Length=50
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  Alpavirinae_Human_feces_A_034_Microviridae_AG0106_hypothetical....  39.7    6e-08
  Gokush_gi|12085136|ref|NP_073538.1|_major_capsid_protein_[Bdell...  18.1    7.3
  Alpavirinae_Human_gut_33_017_Microviridae_AG0156_putative.VP2       18.1    7.8


> Alpavirinae_Human_feces_A_034_Microviridae_AG0106_hypothetical.protein
Length=54

 Score = 39.7 bits (91),  Expect = 6e-08, Method: Compositional matrix adjust.
 Identities = 19/46 (41%), Positives = 31/46 (67%), Gaps = 1/46 (2%)

Query  2   EKQFYLVLLHYGSEVSSKVVISLDRLDSFLSRGYTVEFVQPIRVLS  47
            K++Y   LHY      +VVISLD +DS+L+ GY +E ++P+ V++
Sbjct  5   NKKYYSAYLHYLGH-KREVVISLDVIDSYLALGYIIEILKPVIVVT  49


> Gokush_gi|12085136|ref|NP_073538.1|_major_capsid_protein_[Bdellovibrio_phage_phiMH2K]
Length=533

 Score = 18.1 bits (35),  Expect = 7.3, Method: Composition-based stats.
 Identities = 11/38 (29%), Positives = 17/38 (45%), Gaps = 4/38 (11%)

Query  4    QFYLVLLHYGSEVSSKVVISLDRLDSFLSRGYTVEFVQ  41
            Q  L      SE  +K+  S     SF+  GY + F++
Sbjct  353  QGNLAAFSTASEFGNKIGFS----KSFVEHGYVLGFIR  386


> Alpavirinae_Human_gut_33_017_Microviridae_AG0156_putative.VP2
Length=353

 Score = 18.1 bits (35),  Expect = 7.8, Method: Composition-based stats.
 Identities = 5/12 (42%), Positives = 9/12 (75%), Gaps = 0/12 (0%)

Query  9    LLHYGSEVSSKV  20
            L+HYG+ + + V
Sbjct  336  LIHYGTSIGNTV  347



Lambda      K        H        a         alpha
   0.323    0.140    0.378    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 3623832