bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-18_CDS_annotation_glimmer3.pl_2_1
Length=131
Score E
Sequences producing significant alignments: (Bits) Value
Gokush_Human_feces_E_007_Microviridae_AG0409_putative.VP3 245 4e-85
Gokush_Human_gut_33_003_Microviridae_AG063_hypothetical.protein 187 3e-63
Gokush_Human_feces_E_017_Microviridae_AG0129_hypothetical.protein 70.1 2e-17
Gokush_Human_feces_A_019_Microviridae_AG0440_hypothetical.protein 69.7 2e-17
Gokush_Human_feces_A_020_Microviridae_AG0264_hypothetical.protein 66.6 3e-16
Gokush_Human_gut_32_030_Microviridae_AG0187_putative.VP3 36.6 2e-05
Gokush_Human_gut_31_045_Microviridae_AG0116_putative.VP3 36.6 2e-05
Gokush_Human_gut_27_035_Microviridae_AG0165_putative.VP3 36.6 2e-05
Gokush_Human_feces_A_013_Microviridae_AG008_putative.VP3 35.4 4e-05
Gokush_Human_feces_E_009_Microviridae_AG0284_putative.VP3 32.7 4e-04
> Gokush_Human_feces_E_007_Microviridae_AG0409_putative.VP3
Length=182
Score = 245 bits (625), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 117/131 (89%), Positives = 124/131 (95%), Gaps = 0/131 (0%)
Query 1 MNKRYEEGRKPFFSNPGEKMRKQYVWSKDEKGNKKLIETEPIDIQAEIESYADECDIKNI 60
MNKRYEEGRK FFSNPGEK+RKQYVW KDEKGN KLIETEPIDIQAEIESYADECDIKNI
Sbjct 52 MNKRYEEGRKAFFSNPGEKLRKQYVWGKDEKGNNKLIETEPIDIQAEIESYADECDIKNI 111
Query 61 VRKASFDPEFAKSLVDSAKTDEILDITEWPTDIHEYHAMIATAQANAMKLQQMQEDIANK 120
VRKASFDPEFAKSLVDSAKTDEI+DITEWPT+IHEYHAMIATAQANAM+LQ+MQ+ AN+
Sbjct 112 VRKASFDPEFAKSLVDSAKTDEIIDITEWPTNIHEYHAMIATAQANAMELQRMQKKAANE 171
Query 121 PKKQEESNEQE 131
KKQEESNE E
Sbjct 172 TKKQEESNEPE 182
> Gokush_Human_gut_33_003_Microviridae_AG063_hypothetical.protein
Length=132
Score = 187 bits (476), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 91/131 (69%), Positives = 107/131 (82%), Gaps = 0/131 (0%)
Query 1 MNKRYEEGRKPFFSNPGEKMRKQYVWSKDEKGNKKLIETEPIDIQAEIESYADECDIKNI 60
MNKRYEEGRKPFFS GEK+RKQYVW+KDEKG + L ET PIDIQ EIESYADECDIKNI
Sbjct 1 MNKRYEEGRKPFFSESGEKLRKQYVWTKDEKGEEVLQETTPIDIQQEIESYADECDIKNI 60
Query 61 VRKASFDPEFAKSLVDSAKTDEILDITEWPTDIHEYHAMIATAQANAMKLQQMQEDIANK 120
VRKASFDPEF KSL + A T +DITE+P +IHEYH MIATAQANAMKL+++Q+ +
Sbjct 61 VRKASFDPEFLKSLSEGAMTGTEVDITEFPQNIHEYHRMIATAQANAMKLKELQKAAKEE 120
Query 121 PKKQEESNEQE 131
P + ++ E+E
Sbjct 121 PTVEPKAKEEE 131
> Gokush_Human_feces_E_017_Microviridae_AG0129_hypothetical.protein
Length=161
Score = 70.1 bits (170), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 52/94 (55%), Gaps = 0/94 (0%)
Query 17 GEKMRKQYVWSKDEKGNKKLIETEPIDIQAEIESYADECDIKNIVRKASFDPEFAKSLVD 76
G K R + W+ DEKGNK L++ E ID AEI+SY +E I+NI+ +A+FDP + L
Sbjct 19 GRKTRLTFRWTYDEKGNKSLVQDEEIDRDAEIQSYLEETKIENIINRAAFDPSIVQKLGA 78
Query 77 SAKTDEILDITEWPTDIHEYHAMIATAQANAMKL 110
E D T P+ + E M+ A+ KL
Sbjct 79 QLSDTEPQDFTNMPSTLAEAQNMMIQAENTWNKL 112
> Gokush_Human_feces_A_019_Microviridae_AG0440_hypothetical.protein
Length=162
Score = 69.7 bits (169), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 55/94 (59%), Gaps = 0/94 (0%)
Query 17 GEKMRKQYVWSKDEKGNKKLIETEPIDIQAEIESYADECDIKNIVRKASFDPEFAKSLVD 76
G+K+R + W+ D+KGNK L++ E ID AEI+SY +E I+NI+ +A+FDP + L
Sbjct 19 GKKVRLTFRWAYDDKGNKSLVQDEEIDRDAEIQSYLEETKIENIINRAAFDPSVVQRLGA 78
Query 77 SAKTDEILDITEWPTDIHEYHAMIATAQANAMKL 110
+E D T P+ + E M+ A+ KL
Sbjct 79 QLNDEEPQDFTNMPSTLAEAQNMMIQAENTWNKL 112
> Gokush_Human_feces_A_020_Microviridae_AG0264_hypothetical.protein
Length=157
Score = 66.6 bits (161), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 0/94 (0%)
Query 17 GEKMRKQYVWSKDEKGNKKLIETEPIDIQAEIESYADECDIKNIVRKASFDPEFAKSLVD 76
G K R + W+ DEKGNK L++ E ID AEI+SY +E I+NI+ +A++DP + L
Sbjct 19 GRKTRLTFRWTYDEKGNKSLVQDEEIDRDAEIQSYLEETKIENIINRAAYDPSIVQKLGA 78
Query 77 SAKTDEILDITEWPTDIHEYHAMIATAQANAMKL 110
E D T P+ + E ++ A+ KL
Sbjct 79 QLSDAEPQDFTNMPSTLAEAQNLMIQAEQTWDKL 112
> Gokush_Human_gut_32_030_Microviridae_AG0187_putative.VP3
Length=157
Score = 36.6 bits (83), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 30/57 (53%), Gaps = 0/57 (0%)
Query 7 EGRKPFFSNPGEKMRKQYVWSKDEKGNKKLIETEPIDIQAEIESYADECDIKNIVRK 63
+ R FS+PG Y DEKG L E+ ++ I+SYA+ CDI ++++
Sbjct 8 DARDRIFSDPGSPEHITYAGHYDEKGRVVLEESGRENLYDYIQSYAESCDIHVLMKR 64
> Gokush_Human_gut_31_045_Microviridae_AG0116_putative.VP3
Length=157
Score = 36.6 bits (83), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 30/57 (53%), Gaps = 0/57 (0%)
Query 7 EGRKPFFSNPGEKMRKQYVWSKDEKGNKKLIETEPIDIQAEIESYADECDIKNIVRK 63
+ R FS+PG Y DEKG L E+ ++ I+SYA+ CDI ++++
Sbjct 8 DARDRIFSDPGSPEHITYAGHYDEKGRVVLEESGRENLYDYIQSYAESCDIHVLMKR 64
> Gokush_Human_gut_27_035_Microviridae_AG0165_putative.VP3
Length=157
Score = 36.6 bits (83), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 30/57 (53%), Gaps = 0/57 (0%)
Query 7 EGRKPFFSNPGEKMRKQYVWSKDEKGNKKLIETEPIDIQAEIESYADECDIKNIVRK 63
+ R FS+PG Y DEKG L E+ ++ I+SYA+ CDI ++++
Sbjct 8 DARDRIFSDPGSPEHITYAGHYDEKGRVVLEESGRENLYDYIQSYAESCDIHVLMKR 64
> Gokush_Human_feces_A_013_Microviridae_AG008_putative.VP3
Length=160
Score = 35.4 bits (80), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/79 (28%), Positives = 40/79 (51%), Gaps = 8/79 (10%)
Query 14 SNPGEKMRKQYVWSKDEKGNKKLIETEPIDIQAEIESYADECDIKNIVRKASFDPEFAKS 73
+ PG++ +Y DEKG L E ID AEI+S+A+ D+ ++ + +A+
Sbjct 14 AEPGQREHIRYGGHYDEKGRVVLDEIGRIDTYAEIQSHAESVDLHVLMER------YARG 67
Query 74 LVDSAKTDEIL--DITEWP 90
VD+ + D+ ++P
Sbjct 68 DVDALSKAQGFYGDVLDFP 86
> Gokush_Human_feces_E_009_Microviridae_AG0284_putative.VP3
Length=148
Score = 32.7 bits (73), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (53%), Gaps = 0/53 (0%)
Query 12 FFSNPGEKMRKQYVWSKDEKGNKKLIETEPIDIQAEIESYADECDIKNIVRKA 64
F S PG++ Y D G L E+ I+I +I+S+ D CDI ++++
Sbjct 5 FPSEPGQREVTTYNPRVDSDGVLHLEESGKINIYDQIQSHKDSCDINLLIQRC 57
Lambda K H a alpha
0.309 0.126 0.353 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 8018811