bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-22_CDS_annotation_glimmer3.pl_2_1
Length=77
Score E
Sequences producing significant alignments: (Bits) Value
Alpavirinae_Human_feces_B_020_Microviridae_AG0349_putative.VP4 21.9 0.91
Gokush_Bourget_245_Microviridae_AG084_putative.VP1 21.2 1.7
Alpavirinae_Human_feces_A_033_Microviridae_AG0383_putative.VP1 20.8 2.3
Alpavirinae_Human_feces_D_022_Microviridae_AG0392_putative.VP1 20.4 2.7
Gokush_Bourget_154_Microviridae_AG0430_putative.VP1 20.4 2.7
Gokush_gi|393707872|ref|YP_004732994.1|_putative_cell_lysis_pro... 20.0 3.7
Gokush_Pavin_110_Microviridae_AG051_putative.VP1 20.0 4.4
Gokush_Bourget_332_Microviridae_AG0407_putative.VP1 20.0 4.9
Gokush_Human_feces_D_014_Microviridae_AG028_putative.VP3 18.9 9.6
Alpavirinae_Human_feces_C_010_Microviridae_AG0199_putative.VP1 18.9 10.0
> Alpavirinae_Human_feces_B_020_Microviridae_AG0349_putative.VP4
Length=332
Score = 21.9 bits (45), Expect = 0.91, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 15/30 (50%), Gaps = 0/30 (0%)
Query 21 YWFCFTINFILSSFIPVVTIFMVDVGFIDP 50
Y F +T NF+ + I +T +M V P
Sbjct 150 YGFVYTGNFVNEATINYITKYMTKVDIDHP 179
> Gokush_Bourget_245_Microviridae_AG084_putative.VP1
Length=538
Score = 21.2 bits (43), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 14/31 (45%), Gaps = 3/31 (10%)
Query 45 VGFIDPWLSTMSSGLFTTMPLMFTDSFGDVP 75
G IDPW FT++P + T D P
Sbjct 468 AGTIDPWHYAQK---FTSLPTLNTTFIQDTP 495
> Alpavirinae_Human_feces_A_033_Microviridae_AG0383_putative.VP1
Length=590
Score = 20.8 bits (42), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 7/25 (28%), Positives = 11/25 (44%), Gaps = 0/25 (0%)
Query 20 PYWFCFTINFILSSFIPVVTIFMVD 44
PY C N++ P F++D
Sbjct 546 PYILCGDFNYVFYDQRPTAENFILD 570
> Alpavirinae_Human_feces_D_022_Microviridae_AG0392_putative.VP1
Length=589
Score = 20.4 bits (41), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 7/25 (28%), Positives = 11/25 (44%), Gaps = 0/25 (0%)
Query 20 PYWFCFTINFILSSFIPVVTIFMVD 44
PY C N++ P F++D
Sbjct 545 PYILCGDFNYVFYDQRPTAENFVLD 569
> Gokush_Bourget_154_Microviridae_AG0430_putative.VP1
Length=540
Score = 20.4 bits (41), Expect = 2.7, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 14/30 (47%), Gaps = 3/30 (10%)
Query 46 GFIDPWLSTMSSGLFTTMPLMFTDSFGDVP 75
G IDPW FT++P + + D P
Sbjct 471 GTIDPWHYAQK---FTSLPTLNSTFIQDTP 497
> Gokush_gi|393707872|ref|YP_004732994.1|_putative_cell_lysis_protein_[Microviridae_phi-CA82]
Length=117
Score = 20.0 bits (40), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 10/31 (32%), Positives = 13/31 (42%), Gaps = 0/31 (0%)
Query 21 YWFCFTINFILSSFIPVVTIFMVDVGFIDPW 51
Y + IN + PV + V G I PW
Sbjct 45 YDYQDYINSFSENADPVTLMERVKHGEIAPW 75
> Gokush_Pavin_110_Microviridae_AG051_putative.VP1
Length=541
Score = 20.0 bits (40), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 15/30 (50%), Gaps = 3/30 (10%)
Query 46 GFIDPWLSTMSSGLFTTMPLMFTDSFGDVP 75
G IDPW + FT++P + + D P
Sbjct 472 GTIDPWHYSQK---FTSLPTLNSTFIEDTP 498
> Gokush_Bourget_332_Microviridae_AG0407_putative.VP1
Length=568
Score = 20.0 bits (40), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 10/31 (32%), Positives = 14/31 (45%), Gaps = 3/31 (10%)
Query 45 VGFIDPWLSTMSSGLFTTMPLMFTDSFGDVP 75
G IDPW FT++P + + D P
Sbjct 498 AGTIDPWHYAQR---FTSLPTLNSTFIQDTP 525
> Gokush_Human_feces_D_014_Microviridae_AG028_putative.VP3
Length=174
Score = 18.9 bits (37), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 5/19 (26%), Positives = 10/19 (53%), Gaps = 0/19 (0%)
Query 57 SGLFTTMPLMFTDSFGDVP 75
F ++P+ + FG+ P
Sbjct 122 QAKFASLPIDIKEKFGNDP 140
> Alpavirinae_Human_feces_C_010_Microviridae_AG0199_putative.VP1
Length=731
Score = 18.9 bits (37), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 7/15 (47%), Positives = 9/15 (60%), Gaps = 0/15 (0%)
Query 49 DPWLSTMSSGLFTTM 63
+ WL TM G TT+
Sbjct 352 NKWLPTMKGGADTTL 366
Lambda K H a alpha
0.330 0.141 0.448 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 3612480