bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-23_CDS_annotation_glimmer3.pl_2_6
Length=144
Score E
Sequences producing significant alignments: (Bits) Value
Alpavirinae_Human_feces_B_020_Microviridae_AG0356_hypothetical.... 52.8 7e-12
Alpavirinae_Human_feces_C_029_Microviridae_AG0110_hypothetical.... 52.0 1e-11
Alpavirinae_Human_feces_A_047_Microviridae_AG0318_hypothetical.... 49.3 1e-10
Alpavirinae_Human_feces_C_029_Microviridae_AG0113_hypothetical.... 45.8 2e-09
Alpavirinae_Human_feces_B_021_Microviridae_AG0374_hypothetical.... 43.1 2e-08
Alpavirinae_Human_feces_A_048_Microviridae_AG088_hypothetical.p... 42.7 2e-08
Alpavirinae_Human_feces_B_020_Microviridae_AG0354_hypothetical.... 42.0 6e-08
Alpavirinae_Human_feces_A_048_Microviridae_AG092_hypothetical.p... 40.8 2e-07
Alpavirinae_Human_gut_30_040_Microviridae_AG0139_putative.VP4 21.2 4.8
Gokush_Human_feces_A_020_Microviridae_AG0265_putative.VP1 20.8 7.3
> Alpavirinae_Human_feces_B_020_Microviridae_AG0356_hypothetical.protein
Length=55
Score = 52.8 bits (125), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 25/40 (63%), Positives = 33/40 (83%), Gaps = 2/40 (5%)
Query 21 IKELPAECTYKIAVTIAKAIVP--KDERIIAVVESWKLYP 58
+KELP + TYK+AVT+AKA++ + E I+AVVESWKLYP
Sbjct 1 MKELPGKHTYKVAVTVAKALMQEVEGEEIVAVVESWKLYP 40
> Alpavirinae_Human_feces_C_029_Microviridae_AG0110_hypothetical.protein
Length=54
Score = 52.0 bits (123), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 34/50 (68%), Gaps = 0/50 (0%)
Query 95 SVKTSYELCEDVITKKYIIRKLERRLICEKIYDSEEEELKIWRQKQLKLW 144
V +E+ ED + K+Y + + ER+LICEK YD + E+LK W KQLKL+
Sbjct 5 EVTQGFEIFEDTVIKEYNLNRKERKLICEKTYDKDLEDLKKWNHKQLKLF 54
> Alpavirinae_Human_feces_A_047_Microviridae_AG0318_hypothetical.protein
Length=66
Score = 49.3 bits (116), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 38/59 (64%), Gaps = 3/59 (5%)
Query 1 MAATKFSVITTGNNPSFHMSIKELPAECTYKIAVTIAKAIV-PKDERIIAVVESWKLYP 58
MAATKF+ I NN + +E+P TYKIA AK + P++ +++ VVESWKLYP
Sbjct 1 MAATKFTAIYADNNG--KIIEREIPGMNTYKIAEKFAKMLNDPEETKLVCVVESWKLYP 57
> Alpavirinae_Human_feces_C_029_Microviridae_AG0113_hypothetical.protein
Length=73
Score = 45.8 bits (107), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/59 (46%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query 1 MAATKFSVITTGNNPSFHMSIKELPAECTYKIAVTIAKAIV-PKDERIIAVVESWKLYP 58
MAATKF+ I N + +E+P TYKIA A + PK+ +++ VVESWKLYP
Sbjct 1 MAATKFTAIYVNN--EGKIIEREIPGMNTYKIAEKFAMMLNDPKETKLVCVVESWKLYP 57
> Alpavirinae_Human_feces_B_021_Microviridae_AG0374_hypothetical.protein
Length=66
Score = 43.1 bits (100), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query 1 MAATKFSVITTGNNPSFHMSIKELPAECTYKIAVTIAKAIV-PKDERIIAVVESWKLYP 58
MAATKF+ I N + +E+P TYKIA A + P++ +++ V+ESWKLYP
Sbjct 1 MAATKFTAIYVNN--EGKIIEREIPGMNTYKIAEKFAIMLNDPEETKLVCVIESWKLYP 57
> Alpavirinae_Human_feces_A_048_Microviridae_AG088_hypothetical.protein
Length=54
Score = 42.7 bits (99), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 21/47 (45%), Positives = 31/47 (66%), Gaps = 0/47 (0%)
Query 98 TSYELCEDVITKKYIIRKLERRLICEKIYDSEEEELKIWRQKQLKLW 144
+E+ ED I K+Y + + ERRLI EK YD +++ L+ +QLKLW
Sbjct 8 NGFEIFEDTIIKEYNLNRKERRLIIEKTYDEQKDLLRHVLNQQLKLW 54
> Alpavirinae_Human_feces_B_020_Microviridae_AG0354_hypothetical.protein
Length=80
Score = 42.0 bits (97), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 22/67 (33%), Positives = 35/67 (52%), Gaps = 0/67 (0%)
Query 77 FNTLQEVKHYVWYQTPQKSVKTSYELCEDVITKKYIIRKLERRLICEKIYDSEEEELKIW 136
F T + K ++W+ +++ ED I K Y I+K ERRL+ E YD E+ + + +
Sbjct 7 FTTFKTFKRWLWHNLHTGETLEGFQIWEDTIFKSYNIKKTERRLLVEITYDLEKSQKEYF 66
Query 137 RQKQLKL 143
QL L
Sbjct 67 ENLQLNL 73
> Alpavirinae_Human_feces_A_048_Microviridae_AG092_hypothetical.protein
Length=73
Score = 40.8 bits (94), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query 1 MAATKFSVITTGNNPSFHMSIKELPAECTYKIAVTIAKAIV-PKDERIIAVVESWKLYP 58
MAATKF+ I N + +E+P +YKIA A + P++ +++ V+E+WK+YP
Sbjct 1 MAATKFTAIYINN--EGKIIKREIPGMNSYKIAEKFAMMLNDPEETKLVCVIETWKMYP 57
> Alpavirinae_Human_gut_30_040_Microviridae_AG0139_putative.VP4
Length=376
Score = 21.2 bits (43), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 12/39 (31%), Positives = 19/39 (49%), Gaps = 0/39 (0%)
Query 5 KFSVITTGNNPSFHMSIKELPAECTYKIAVTIAKAIVPK 43
K+ T G+NP ++KE E + A+ AK + K
Sbjct 278 KYGRETMGDNPIAWNAMKERRKEEKQRRAIAEAKKLAEK 316
> Gokush_Human_feces_A_020_Microviridae_AG0265_putative.VP1
Length=558
Score = 20.8 bits (42), Expect = 7.3, Method: Composition-based stats.
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 0/34 (0%)
Query 2 AATKFSVITTGNNPSFHMSIKELPAECTYKIAVT 35
+A ++ GN P + KEL TYK +T
Sbjct 213 SAESVTIPMLGNAPIYGYKEKELKTPWTYKNPMT 246
Lambda K H a alpha
0.320 0.134 0.405 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 9326378