bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-24_CDS_annotation_glimmer3.pl_2_5
Length=421
Score E
Sequences producing significant alignments: (Bits) Value
Alpavirinae_Human_gut_30_017_Microviridae_AG0204_hypothetical.p... 714 0.0
Alpavirinae_Human_gut_21_005_Microviridae_AG012_hypothetical.pr... 41.6 7e-06
Alpavirinae_Human_feces_C_010_Microviridae_AG0197_hypothetical.... 40.0 2e-05
Alpavirinae_Human_feces_B_007_Microviridae_AG069_hypothetical.p... 38.5 6e-05
Alpavirinae_Human_feces_C_043_Microviridae_AG0320_hypothetical.... 37.4 2e-04
Pichovirinae_59_Coral_002_Microviridae_AG0342_hypothetical.prot... 36.2 3e-04
Pichovirinae_Pavin_279_Microviridae_AG0269_hypothetical.protein... 35.8 4e-04
Pichovirinae_Bourget_523_Microviridae_AG0337_hypothetical.prote... 35.0 8e-04
Pichovirinae_Pavin_723_Microviridae_AG0326_hypothetical.protein... 34.3 0.001
Pichovirinae_66_Microbialites_001_Microviridae_AG0133_hypotheti... 33.9 0.002
> Alpavirinae_Human_gut_30_017_Microviridae_AG0204_hypothetical.protein.BACPLE
Length=422
Score = 714 bits (1844), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/421 (94%), Positives = 409/421 (97%), Gaps = 0/421 (0%)
Query 1 MPAAPFLALMGQSLGMNaassagssagagiadaLFGGISARRNWKYKQKEMALQQQYALE 60
MPAA F ALMGQSLGMNAASSAGSSAG GIADALFGGISARRNWKYKQKEMALQQQYALE
Sbjct 1 MPAAGFAALMGQSLGMNAASSAGSSAGGGIADALFGGISARRNWKYKQKEMALQQQYALE 60
Query 61 QMSKSAEFQLAHDKQMFDYQNSYNDPAAVLERNFSAGLNPAAVLGQSGVGVSATIPTssg 120
QMSKSAE+QLAHDKQMFDYQN+YNDP+AVLERN AGLNPAAVLGQSGVGVSATIPTSSG
Sbjct 61 QMSKSAEYQLAHDKQMFDYQNAYNDPSAVLERNLVAGLNPAAVLGQSGVGVSATIPTSSG 120
Query 121 gapsghgpvasgsggglaalagnpsaYADVQLKDAQQERERSAASLNDAEADWYRSQTLD 180
GAPSGHGPVASGSGGGLAALAGNPSAYADVQLKDAQQERERSAASLNDAEADWYRSQTLD
Sbjct 121 GAPSGHGPVASGSGGGLAALAGNPSAYADVQLKDAQQERERSAASLNDAEADWYRSQTLD 180
Query 181 KDLRERLMKAQAGLAEAGITESASRASLNAAITLSYSIDNELKDAAFGYNLEMIKANLGK 240
KDLRERLMKAQAGLAEAGITES+SRASLNAAITLSYSIDNELKDAAFGYNLEMIKANLGK
Sbjct 181 KDLRERLMKAQAGLAEAGITESSSRASLNAAITLSYSIDNELKDAAFGYNLEMIKANLGK 240
Query 241 AKEEYYQLKARTGYIDELIEKELQLLTVRAIYLKSSASNQEQLARVNELTADDLENWFDV 300
AKEEYYQLK RTGYID+L+E ELQLLT RAIYLKSSASNQEQLARVN+LTADDLENWFDV
Sbjct 241 AKEEYYQLKTRTGYIDDLLEGELQLLTARAIYLKSSASNQEQLARVNDLTADDLENWFDV 300
Query 301 NWNTQVDVPIIDEKGKVERIVRMTGKEIRKEYMKLDLQDFQYDMYTNRWALRSEKNRFGY 360
NWNTQV+VPIIDEKGK+ER V+MTGKEIR+EYMKL+LQDFQYDMYTNRW+LRSEKNRFGY
Sbjct 301 NWNTQVEVPIIDEKGKIERTVKMTGKEIRREYMKLNLQDFQYDMYTNRWSLRSEKNRFGY 360
Query 361 SIVNTAVNGAISAAGHVVGAKVLSTAPPVQRIEDVTEDLTSSPDGSGWTKHTTTTSRQFR 420
SIVNTAVNGAISAAGHVVGAKVLSTAPPVQR +DVTEDL SPDG+GWTKHTTTTSRQFR
Sbjct 361 SIVNTAVNGAISAAGHVVGAKVLSTAPPVQRFDDVTEDLVPSPDGAGWTKHTTTTSRQFR 420
Query 421 R 421
R
Sbjct 421 R 421
> Alpavirinae_Human_gut_21_005_Microviridae_AG012_hypothetical.protein.BACPLE
Length=383
Score = 41.6 bits (96), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 94/349 (27%), Positives = 144/349 (41%), Gaps = 56/349 (16%)
Query 54 QQQYALEQMSKSA-EFQLAHDK---QMFDYQNSYNDPAAVLERNFSAGLNPAAVLGQSGV 109
Q A E+ SK A E +LA + QM++ NSYN PAA ++R AGLNP + + V
Sbjct 49 QSAEAFERESKFAREERLAQQQWIEQMYEKNNSYNSPAAQMQRLKEAGLNPDLMYSRGDV 108
Query 110 GVSATIPTssggapsghgpvasgsggglaalagnpsaYADVQLKDAQQERERSAASLNDA 169
G +AT P + AP+ V + G A AD LK +Q A L D
Sbjct 109 G-NATAPEAPAQAPTPRFNVIPTNTYGQTAQIA-----ADTGLKASQ-------ARLAD- 154
Query 170 EADWYRSQTLDKDLRERLMKAQAGLAEAGITESASRASL-NAAITLSYSID--NELKDAA 226
SQ+ D E L+ A L +A + S L N+ I +++ + N +
Sbjct 155 ------SQSKKTDTEESLLTADYLLRKA---RTDSEIQLNNSTIYVNHELGQLNHAEADL 205
Query 227 FGYNLEMIKANLGKAKEEYYQLKARTGYIDELI----------EKELQLLTVRAIYLKSS 276
L+ I + +A+E L+A+ IDE I KE +LL VR Y
Sbjct 206 AAKKLQEIDVAMSEARERINTLRAQQSEIDEKIVQMKFDRYLRSKEFELLCVR-TYQDIK 264
Query 277 ASNQE---QLARVNELTADDLENWFDVNWNTQV--DVPIIDEKGKVERIVRMTGKEIRKE 331
SN A V ++ A L ++N +T + ++ + + + + TG +I +
Sbjct 265 ESNSRISLNAAEVQDIMATQLARVLNLNASTYMMKKQGLLASEQTMTELFKQTGIDISNQ 324
Query 332 YMKLDLQDFQYDMYTNRWALRSEKNRFGYSIVNTAVNGAISAAGHVVGA 380
+ Q Q T R+ ++ T +N AAG GA
Sbjct 325 QAIFNFQQAQTWDSTERFT----------NVATTWINSLSFAAGQFAGA 363
> Alpavirinae_Human_feces_C_010_Microviridae_AG0197_hypothetical.protein.BACPLE
Length=382
Score = 40.0 bits (92), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 38/63 (60%), Gaps = 5/63 (8%)
Query 58 ALEQMSKSA-EFQLAHDK---QMFDYQNSYNDPAAVLERNFSAGLNPAAVLGQSGVGVSA 113
A E+ SK A E +LA + QM++ NSYN PAA ++R AGLNP + + VG +A
Sbjct 52 AFERESKFAREERLAQQQWIEQMYEKNNSYNSPAAQMQRLKEAGLNPDLMYSRGDVG-NA 110
Query 114 TIP 116
T P
Sbjct 111 TAP 113
> Alpavirinae_Human_feces_B_007_Microviridae_AG069_hypothetical.protein.BACEGG.02723
Length=383
Score = 38.5 bits (88), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 56/124 (45%), Gaps = 15/124 (12%)
Query 1 MPAAPFLALMGQSLGMNaassagssagagiadaLFGGISARRNWK---YKQKEMALQQQY 57
M AA AL+G G ++ +AG G A LFG I A R K QKE Q +
Sbjct 1 MSAAALTALLGSGTG----GASLLNAGVGAASGLFGSIGAGRRQKRAIAAQKEENAQARA 56
Query 58 ALEQMSKSAEFQLAHDKQMFDYQNSYNDPAAVLERNFSAGLNPAAVLGQSGVG-----VS 112
E+M A + +++ + SYN P+ V+ R AGLNP + G G V+
Sbjct 57 WSEKM---ARWYANNERANLADERSYNSPSTVMSRLKDAGLNPDLIYGNGAAGLVDSNVA 113
Query 113 ATIP 116
T P
Sbjct 114 GTAP 117
> Alpavirinae_Human_feces_C_043_Microviridae_AG0320_hypothetical.protein.BACEGG.02723
Length=396
Score = 37.4 bits (85), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 16/86 (19%)
Query 41 RRNWKYK----QKEMALQQQYAL-------EQMSKSAEFQLAHDKQMFDYQNSYNDPAAV 89
RR KY Q++MA +Q A E MS+ E+ L Q ++ +N+YN PAA
Sbjct 32 RRAEKYNKWALQQQMAFNEQQAQLGRDWSEEMMSQQNEWNL----QQWNRENAYNTPAAQ 87
Query 90 LERNFSAGLNPA-AVLGQSGVGVSAT 114
R +AGLN A A+ GQ +G++ +
Sbjct 88 RSRLEAAGLNAALAMQGQGSIGMAGS 113
> Pichovirinae_59_Coral_002_Microviridae_AG0342_hypothetical.protein.BACEGG.02723
Length=233
Score = 36.2 bits (82), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (59%), Gaps = 2/46 (4%)
Query 72 HDKQMFDYQNSYNDPAAVLERNFSAGLNPAAVL--GQSGVGVSATI 115
+ + ++ QN YN P A +ER AGLNP + GQ+ GV+ +I
Sbjct 33 QNVEFWNMQNKYNTPKAQMERLKEAGLNPNLIYGSGQTNTGVAGSI 78
> Pichovirinae_Pavin_279_Microviridae_AG0269_hypothetical.protein.BACPLE
Length=292
Score = 35.8 bits (81), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/83 (34%), Positives = 42/83 (51%), Gaps = 17/83 (20%)
Query 37 GISARRNWKYKQKEMALQQQYALEQMSKSAEFQLAHDKQMFDYQNSYNDPAAVLERNFSA 96
G++ R+N K+ + M ++Q+ALE + QN YN PAA +R A
Sbjct 42 GMTNRKNRKFAIQIMNTERQWALEDAAA---------------QNVYNSPAAQKQRLKDA 86
Query 97 GLNPAAVLGQSGVGVSATI--PT 117
LNP+ + G SG S++I PT
Sbjct 87 ELNPSLMYGGSGHVESSSIVRPT 109
> Pichovirinae_Bourget_523_Microviridae_AG0337_hypothetical.protein.BACEGG.02723
Length=307
Score = 35.0 bits (79), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/47 (49%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query 73 DKQMF-DYQNSYNDPAAVLERNFSAGLNPAAVLGQSGVGVSA-TIPT 117
D MF D QN YN P + R SAGLNP V + G SA IPT
Sbjct 47 DNLMFWDMQNQYNSPEQQMARLKSAGLNPNMVYDKGGAIQSAGNIPT 93
> Pichovirinae_Pavin_723_Microviridae_AG0326_hypothetical.protein.BACEGG.02723
Length=266
Score = 34.3 bits (77), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/32 (47%), Positives = 20/32 (63%), Gaps = 0/32 (0%)
Query 75 QMFDYQNSYNDPAAVLERNFSAGLNPAAVLGQ 106
Q +D QN YN P+ ++R AGLNP + GQ
Sbjct 48 QDWDKQNKYNSPSQQMQRYKEAGLNPNLIYGQ 79
> Pichovirinae_66_Microbialites_001_Microviridae_AG0133_hypothetical.protein.BACEGG.02723
Length=275
Score = 33.9 bits (76), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 15/41 (37%), Positives = 23/41 (56%), Gaps = 0/41 (0%)
Query 75 QMFDYQNSYNDPAAVLERNFSAGLNPAAVLGQSGVGVSATI 115
+ ++ QN YN P ++R AGLNP + GQ G ++ I
Sbjct 38 KFWNMQNEYNLPINQMQRFKDAGLNPHLIYGQGNAGNASPI 78
Lambda K H a alpha
0.314 0.128 0.357 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 37315600