bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-25_CDS_annotation_glimmer3.pl_2_2
Length=101
Score E
Sequences producing significant alignments: (Bits) Value
Alpavirinae_Human_gut_32_015_Microviridae_AG0212_hypothetical.p... 30.4 4e-04
Alpavirinae_Human_gut_24_085_Microviridae_AG0229_hypothetical.p... 30.4 6e-04
Alpavirinae_Human_feces_B_023_Microviridae_AG0144_hypothetical.... 28.1 0.005
Alpavirinae_Human_feces_A_016_Microviridae_AG003_hypothetical.p... 26.9 0.012
Alpavirinae_Human_gut_31_037_Microviridae_AG0296_hypothetical.p... 25.4 0.049
Alpavirinae_Human_feces_A_047_Microviridae_AG0313_hypothetical.... 25.0 0.063
Alpavirinae_Human_feces_B_021_Microviridae_AG0367_hypothetical.... 24.3 0.14
Alpavirinae_Human_feces_B_020_Microviridae_AG0348_hypothetical.... 23.5 0.31
Alpavirinae_Human_feces_A_048_Microviridae_AG091_hypothetical.p... 22.3 0.64
Alpavirinae_Human_gut_30_040_Microviridae_AG0134_putative.VP1 21.9 1.8
> Alpavirinae_Human_gut_32_015_Microviridae_AG0212_hypothetical.protein
Length=72
Score = 30.4 bits (67), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 23/35 (66%), Gaps = 0/35 (0%)
Query 47 KWVITTCGALVNGKEFDTKEDAEKHLAKKEWDDIL 81
K+VI L + +EF+T+E+AE+++ K W+ I
Sbjct 18 KYVICIKDELASKEEFNTREEAEQYIESKPWELIF 52
> Alpavirinae_Human_gut_24_085_Microviridae_AG0229_hypothetical.protein
Length=72
Score = 30.4 bits (67), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 23/35 (66%), Gaps = 0/35 (0%)
Query 47 KWVITTCGALVNGKEFDTKEDAEKHLAKKEWDDIL 81
K+VI L + +EF+T+E+AE+++ K W+ I
Sbjct 18 KYVICIKDELASKEEFNTREEAEQYIESKPWELIF 52
> Alpavirinae_Human_feces_B_023_Microviridae_AG0144_hypothetical.protein
Length=87
Score = 28.1 bits (61), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 0/36 (0%)
Query 46 NKWVITTCGALVNGKEFDTKEDAEKHLAKKEWDDIL 81
N +++T L K+F TKE+A+ ++ +WD I+
Sbjct 17 NDFIVTIGRHLATEKKFKTKEEAQAYIDTPKWDTIV 52
> Alpavirinae_Human_feces_A_016_Microviridae_AG003_hypothetical.protein
Length=76
Score = 26.9 bits (58), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (61%), Gaps = 2/38 (5%)
Query 46 NKWVITTCGALVNGKE-FDTKEDAEKHLAKKEWDDILT 82
N +VI CG + KE F+T + A++++ K WD I T
Sbjct 16 NDYVIV-CGNVQASKEHFNTVKAAQEYINTKPWDLIFT 52
> Alpavirinae_Human_gut_31_037_Microviridae_AG0296_hypothetical.protein
Length=79
Score = 25.4 bits (54), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 16/68 (24%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query 35 NGPFVL--IRNKKNKWVITTCGALVNGKEFDTKEDAEKHLAKKEWDDILTAALIFFTHVK 92
N F++ + + N ++IT L + F + ++AE + +W+ + + A+ +K
Sbjct 9 NDAFIIRALNEENNDFIITLGDHLATPEHFKSYDEAENSIEAVDWNLVASLAMSLIEGMK 68
Query 93 NQMENTQK 100
+MEN +K
Sbjct 69 -KMENEKK 75
> Alpavirinae_Human_feces_A_047_Microviridae_AG0313_hypothetical.protein
Length=75
Score = 25.0 bits (53), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 11/42 (26%), Positives = 26/42 (62%), Gaps = 2/42 (5%)
Query 46 NKWVITTCGALVNGKEFDTKEDAEKHLAKKEWDDILTAALIF 87
N+++IT L ++F +++ AE + K +W+ L +A+++
Sbjct 18 NEFIITIGNHLATEEKFKSRKAAEMRINKTDWN--LVSAMVY 57
> Alpavirinae_Human_feces_B_021_Microviridae_AG0367_hypothetical.protein
Length=79
Score = 24.3 bits (51), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 12/42 (29%), Positives = 26/42 (62%), Gaps = 2/42 (5%)
Query 46 NKWVITTCGALVNGKEFDTKEDAEKHLAKKEWDDILTAALIF 87
++++IT L ++F +++ AE + K +W+ L +ALI+
Sbjct 17 DEFIITIGNHLATEEKFKSRKAAEMRINKTDWN--LVSALIY 56
> Alpavirinae_Human_feces_B_020_Microviridae_AG0348_hypothetical.protein
Length=81
Score = 23.5 bits (49), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 11/40 (28%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Query 48 WVITTCGALVNGKEFDTKEDAEKHLAKKEWDDILTAALIF 87
++IT L ++F + + A+ + K WD L +AL++
Sbjct 19 YIITIGNHLATEEKFKSAKAAQMQINKTNWD--LVSALVY 56
> Alpavirinae_Human_feces_A_048_Microviridae_AG091_hypothetical.protein
Length=79
Score = 22.3 bits (46), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 11/42 (26%), Positives = 25/42 (60%), Gaps = 2/42 (5%)
Query 46 NKWVITTCGALVNGKEFDTKEDAEKHLAKKEWDDILTAALIF 87
++++IT L ++F +++ AE + K +W+ L +AL +
Sbjct 17 DEFIITIGNHLATEEKFKSRKAAEMRINKTDWN--LVSALFY 56
> Alpavirinae_Human_gut_30_040_Microviridae_AG0134_putative.VP1
Length=679
Score = 21.9 bits (45), Expect = 1.8, Method: Composition-based stats.
Identities = 9/26 (35%), Positives = 15/26 (58%), Gaps = 0/26 (0%)
Query 76 EWDDILTAALIFFTHVKNQMENTQKE 101
+W +T AL+++ KN N Q+E
Sbjct 160 DWTWNITKALMYYDIFKNYYANKQEE 185
Lambda K H a alpha
0.311 0.130 0.361 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 5045304