bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-25_CDS_annotation_glimmer3.pl_2_6
Length=402
Score E
Sequences producing significant alignments: (Bits) Value
Alpavirinae_Human_gut_32_015_Microviridae_AG0210_hypothetical.p... 26.2 0.53
Alpavirinae_Human_feces_C_043_Microviridae_AG0320_hypothetical.... 25.8 0.59
Alpavirinae_Human_gut_24_085_Microviridae_AG0228_hypothetical.p... 24.6 1.5
Microvirus_gi|242346752|ref|YP_002985214.1|_gpH_[Enterobacteria... 24.6 1.6
Gokush_Human_feces_E_009_Microviridae_AG0282_putative.VP4 23.9 2.8
Gokush_Human_feces_E_010_Microviridae_AG0121_putative.VP2 23.5 2.9
Gokush_Bourget_248_Microviridae_AG0249_putative.VP4 23.5 3.0
Gokush_Bourget_504_Microviridae_AG0255_putative.VP4 23.5 3.0
Pichovirinae_Bourget_523_Microviridae_AG0335_putative.VP4 23.5 3.8
Alpavirinae_Human_gut_30_040_Microviridae_AG0135_hypothetical.p... 23.5 3.9
> Alpavirinae_Human_gut_32_015_Microviridae_AG0210_hypothetical.protein
Length=341
Score = 26.2 bits (56), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 17/46 (37%), Positives = 25/46 (54%), Gaps = 5/46 (11%)
Query 39 KKQIRQQKEMMENAAKINYKYGEMAAENAFERQQVLYDRT-YQDQS 83
KKQ +KEMM + Y+Y E AA N R ++++T Y+ Q
Sbjct 49 KKQREHEKEMM----GLQYQYNEAAANNNMTRALEMWEKTGYEAQG 90
> Alpavirinae_Human_feces_C_043_Microviridae_AG0320_hypothetical.protein.BACEGG.02723
Length=396
Score = 25.8 bits (55), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 45/112 (40%), Gaps = 12/112 (11%)
Query 239 DKFGKIVFGEESFQGGMMTAEKQILEGTAAIKTLESIYADEKLSAEIRKINADACSGMaq 298
D K +G+E A+ I +G+A I L S A + + ADA
Sbjct 167 DNLLKARYGDE-------LAQISIGKGSAEISNLRSQSARNYAETAVASLTADA---QRT 216
Query 299 aayyyaaGETQKAEAKMLEVKKRTEEATAELRELQYWTEIANTIIKLAQVVG 350
Y G+ KM E T A EL + +Y TEIAN I LA+ G
Sbjct 217 LNKYLDMGQQLSLITKMAEYSSIT--AGTELTKAKYRTEIANEIKTLAEANG 266
> Alpavirinae_Human_gut_24_085_Microviridae_AG0228_hypothetical.protein
Length=335
Score = 24.6 bits (52), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/45 (38%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
Query 39 KKQIRQQKEMMENAAKINYKYGEMAAENAFERQQVLYDRT-YQDQ 82
KKQ +KEMM + Y+Y E AA N R ++ +T Y+ Q
Sbjct 49 KKQREHEKEMM----GLQYQYNEAAANNNMTRALEMWRKTGYEAQ 89
> Microvirus_gi|242346752|ref|YP_002985214.1|_gpH_[Enterobacteria_phage_St-1]
Length=332
Score = 24.6 bits (52), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 41/96 (43%), Gaps = 20/96 (21%)
Query 147 VRMS-ERKNEAEINLLNTQADALK----AEAGKNKEETQ------TIIDKRIWEVKQEMF 195
+RM+ R E +L N+Q AL+ AE GK ++TQ + + +V +
Sbjct 241 MRMALTRAQETGQHLTNSQIMALEKKVYAEIGKIHQDTQNSRYGSSQVTAAAKDVTNMIT 300
Query 196 KGWKGFIDTANQLWDQMVKWQPTEKTTIDGKEVEIP 231
GF D A+Q W+ K DGK IP
Sbjct 301 DASSGFADWASQQWNSFFK---------DGKSDGIP 327
> Gokush_Human_feces_E_009_Microviridae_AG0282_putative.VP4
Length=340
Score = 23.9 bits (50), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 8/11 (73%), Positives = 10/11 (91%), Gaps = 0/11 (0%)
Query 225 GKEVEIPKYFE 235
GKE+ IPKYF+
Sbjct 271 GKEITIPKYFD 281
> Gokush_Human_feces_E_010_Microviridae_AG0121_putative.VP2
Length=199
Score = 23.5 bits (49), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/46 (37%), Positives = 27/46 (59%), Gaps = 4/46 (9%)
Query 307 ETQKAEAKMLEVKKRTEEATAELRELQYWTEIAN--TIIKLAQVVG 350
E ++A+AK +EV+ A EL++ Q TE+A + + AQ VG
Sbjct 83 ELKEAQAKQVEVQNSALAADTELKKAQ--TEVAKEASTLTYAQAVG 126
> Gokush_Bourget_248_Microviridae_AG0249_putative.VP4
Length=299
Score = 23.5 bits (49), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/78 (27%), Positives = 35/78 (45%), Gaps = 17/78 (22%)
Query 168 LKAEAGKNKEETQTIIDKRIWEV---KQEMFK-------GWKGFIDTANQLWDQMVKWQP 217
+K GKN E+ T ID E+ K E K G++ + + ++ P
Sbjct 176 MKKVTGKNAEQHYTEIDPESGEITIRKPEFTKMSLKPGIGYEWYKKYTSDVY-------P 228
Query 218 TEKTTIDGKEVEIPKYFE 235
+ I GK+V+ PKY++
Sbjct 229 HDYVVIRGKKVKPPKYYD 246
> Gokush_Bourget_504_Microviridae_AG0255_putative.VP4
Length=299
Score = 23.5 bits (49), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 8/19 (42%), Positives = 13/19 (68%), Gaps = 0/19 (0%)
Query 217 PTEKTTIDGKEVEIPKYFE 235
P + I GK+V+ PKY++
Sbjct 228 PNDYVVIRGKKVKPPKYYD 246
> Pichovirinae_Bourget_523_Microviridae_AG0335_putative.VP4
Length=291
Score = 23.5 bits (49), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 22/34 (65%), Gaps = 5/34 (15%)
Query 206 NQLWDQMVKWQPT--EKTTI---DGKEVEIPKYF 234
N L ++++++ + E+ I DGK++ +P+YF
Sbjct 190 NYLSEKIIRYHRSDIERNFITLEDGKKISLPRYF 223
> Alpavirinae_Human_gut_30_040_Microviridae_AG0135_hypothetical.protein
Length=377
Score = 23.5 bits (49), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 19/33 (58%), Gaps = 0/33 (0%)
Query 142 MSLRQVRMSERKNEAEINLLNTQADALKAEAGK 174
+ ++Q+ R N+A+I L QA+ AEA K
Sbjct 128 LQVQQLEQQRRMNDAQIALAEAQANKAGAEANK 160
Lambda K H a alpha
0.312 0.128 0.353 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 35587412