bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-29_CDS_annotation_glimmer3.pl_2_1
Length=218
Score E
Sequences producing significant alignments: (Bits) Value
Gokush_Human_feces_B_068_Microviridae_AG0331_putative.VP1 363 3e-125
Gokush_Human_feces_E_009_Microviridae_AG0285_putative.VP1 356 4e-122
Gokush_Human_gut_32_030_Microviridae_AG0188_putative.VP1 353 4e-121
Gokush_Human_gut_31_045_Microviridae_AG0117_putative.VP1 353 4e-121
Gokush_Human_gut_27_035_Microviridae_AG0167_putative.VP1 353 4e-121
Gokush_Human_feces_A_029_Microviridae_AG0226_putative.VP1 348 3e-120
Gokush_Human_feces_A_013_Microviridae_AG009_putative.VP1 341 8e-116
Gokush_Human_feces_B_029_Microviridae_AG0417_putative.VP1 276 2e-91
Gokush_Human_feces_D_014_Microviridae_AG029_putative.VP1 273 1e-89
Gokush_Human_feces_A_019_Microviridae_AG0438_putative.VP1 270 1e-88
> Gokush_Human_feces_B_068_Microviridae_AG0331_putative.VP1
Length=547
Score = 363 bits (933), Expect = 3e-125, Method: Compositional matrix adjust.
Identities = 169/218 (78%), Positives = 189/218 (87%), Gaps = 0/218 (0%)
Query 1 VTSPDARLQRPEYLGGNRIPIVISEINQTSGTSANSTPQGNPSGQSRTTDVHSDFKKSFV 60
VTSPDARLQRPEYLGGNRIPI I+++ Q+S T A+ TPQGN + S T+D HSDF KSFV
Sbjct 330 VTSPDARLQRPEYLGGNRIPININQVVQSSSTDASGTPQGNTAAYSLTSDNHSDFTKSFV 389
Query 61 EHGFIIGVMVARYDHTYQQGLERFWSRKGRLDYYWPVFANIGEQAVLNKEIYAQGNGTDD 120
EHGF+IGVMVARY HTYQQGLERFWSRK R DYY+PVFANIGEQA+ NKEIYAQG DD
Sbjct 390 EHGFLIGVMVARYRHTYQQGLERFWSRKDRFDYYFPVFANIGEQAIKNKEIYAQGTVKDD 449
Query 121 EVFGYQEAWADYRYKPNRVTGEMRSQAPQSLDVWHLGDDYSKLPSLSDSWVQEDSAVVNR 180
EVFGYQEAWADYRY+PNRVTGEMRS APQSLDVWHLGDDY LPSLSDSW++EDS VNR
Sbjct 450 EVFGYQEAWADYRYRPNRVTGEMRSSAPQSLDVWHLGDDYESLPSLSDSWIREDSKTVNR 509
Query 181 VIAVSEENSNQLWADIFIKNKCTRAMPMYSIPGLIDHH 218
V+AVS+ S QL+ DI+++N CTR MP+YSIPGLIDHH
Sbjct 510 VLAVSDNVSAQLFCDIYVRNLCTRPMPLYSIPGLIDHH 547
> Gokush_Human_feces_E_009_Microviridae_AG0285_putative.VP1
Length=559
Score = 356 bits (913), Expect = 4e-122, Method: Compositional matrix adjust.
Identities = 162/218 (74%), Positives = 184/218 (84%), Gaps = 0/218 (0%)
Query 1 VTSPDARLQRPEYLGGNRIPIVISEINQTSGTSANSTPQGNPSGQSRTTDVHSDFKKSFV 60
VTSPD+RLQRPEYLGGNR+PI I+++ Q S T TP GN +G S T+D HSDF++SF
Sbjct 342 VTSPDSRLQRPEYLGGNRVPININQVVQNSATVEGETPLGNVAGYSVTSDTHSDFRQSFT 401
Query 61 EHGFIIGVMVARYDHTYQQGLERFWSRKGRLDYYWPVFANIGEQAVLNKEIYAQGNGTDD 120
EHGF+IGVMVARYDHTYQQG+ERFWSRK R DYYWPV ANIGEQAVLNKEIYAQG DD
Sbjct 402 EHGFVIGVMVARYDHTYQQGIERFWSRKTRFDYYWPVLANIGEQAVLNKEIYAQGTAEDD 461
Query 121 EVFGYQEAWADYRYKPNRVTGEMRSQAPQSLDVWHLGDDYSKLPSLSDSWVQEDSAVVNR 180
EVFGYQEAW DYRYKPNRVTGEMRSQ QSLDVWHLGDDY+KLPSLS W+ ED V+R
Sbjct 462 EVFGYQEAWGDYRYKPNRVTGEMRSQYAQSLDVWHLGDDYTKLPSLSSEWIVEDKTNVDR 521
Query 181 VIAVSEENSNQLWADIFIKNKCTRAMPMYSIPGLIDHH 218
V+AV+ N+NQL+AD++I N+ TR MPMYSIPGL+DHH
Sbjct 522 VLAVTSTNANQLFADLYINNQTTRPMPMYSIPGLVDHH 559
> Gokush_Human_gut_32_030_Microviridae_AG0188_putative.VP1
Length=562
Score = 353 bits (907), Expect = 4e-121, Method: Compositional matrix adjust.
Identities = 162/218 (74%), Positives = 184/218 (84%), Gaps = 0/218 (0%)
Query 1 VTSPDARLQRPEYLGGNRIPIVISEINQTSGTSANSTPQGNPSGQSRTTDVHSDFKKSFV 60
VTSPDARLQRPEYLGGNR+PI +++I Q SGT + +TPQG GQS TTD HSDF KSF
Sbjct 345 VTSPDARLQRPEYLGGNRVPINVNQIVQQSGTQSGTTPQGTVVGQSLTTDKHSDFTKSFT 404
Query 61 EHGFIIGVMVARYDHTYQQGLERFWSRKGRLDYYWPVFANIGEQAVLNKEIYAQGNGTDD 120
EHG IIGVMVARYDHTYQQGL R WSRK + D+YWPVFANIGEQA+ NKEI+AQGN D+
Sbjct 405 EHGLIIGVMVARYDHTYQQGLNRLWSRKDKFDFYWPVFANIGEQAIKNKEIFAQGNDKDN 464
Query 121 EVFGYQEAWADYRYKPNRVTGEMRSQAPQSLDVWHLGDDYSKLPSLSDSWVQEDSAVVNR 180
EVFGYQEAWA+YRYKPN VTGEMRS QSLDVWHL DDYS LPSLSDSW++ED A ++R
Sbjct 465 EVFGYQEAWAEYRYKPNMVTGEMRSAYAQSLDVWHLADDYSTLPSLSDSWIREDKANIDR 524
Query 181 VIAVSEENSNQLWADIFIKNKCTRAMPMYSIPGLIDHH 218
V+AV+ SNQ +ADI++KN CTR MPMYS+PGLIDHH
Sbjct 525 VLAVTSAVSNQFFADIYVKNYCTRPMPMYSVPGLIDHH 562
> Gokush_Human_gut_31_045_Microviridae_AG0117_putative.VP1
Length=562
Score = 353 bits (907), Expect = 4e-121, Method: Compositional matrix adjust.
Identities = 162/218 (74%), Positives = 184/218 (84%), Gaps = 0/218 (0%)
Query 1 VTSPDARLQRPEYLGGNRIPIVISEINQTSGTSANSTPQGNPSGQSRTTDVHSDFKKSFV 60
VTSPDARLQRPEYLGGNR+PI +++I Q SGT + +TPQG GQS TTD HSDF KSF
Sbjct 345 VTSPDARLQRPEYLGGNRVPINVNQIVQQSGTQSGTTPQGTVVGQSLTTDKHSDFTKSFT 404
Query 61 EHGFIIGVMVARYDHTYQQGLERFWSRKGRLDYYWPVFANIGEQAVLNKEIYAQGNGTDD 120
EHG IIGVMVARYDHTYQQGL R WSRK + D+YWPVFANIGEQA+ NKEI+AQGN D+
Sbjct 405 EHGLIIGVMVARYDHTYQQGLNRLWSRKDKFDFYWPVFANIGEQAIKNKEIFAQGNDKDN 464
Query 121 EVFGYQEAWADYRYKPNRVTGEMRSQAPQSLDVWHLGDDYSKLPSLSDSWVQEDSAVVNR 180
EVFGYQEAWA+YRYKPN VTGEMRS QSLDVWHL DDYS LPSLSDSW++ED A ++R
Sbjct 465 EVFGYQEAWAEYRYKPNMVTGEMRSAYAQSLDVWHLADDYSTLPSLSDSWIREDKANIDR 524
Query 181 VIAVSEENSNQLWADIFIKNKCTRAMPMYSIPGLIDHH 218
V+AV+ SNQ +ADI++KN CTR MPMYS+PGLIDHH
Sbjct 525 VLAVTSAVSNQFFADIYVKNYCTRPMPMYSVPGLIDHH 562
> Gokush_Human_gut_27_035_Microviridae_AG0167_putative.VP1
Length=562
Score = 353 bits (907), Expect = 4e-121, Method: Compositional matrix adjust.
Identities = 162/218 (74%), Positives = 184/218 (84%), Gaps = 0/218 (0%)
Query 1 VTSPDARLQRPEYLGGNRIPIVISEINQTSGTSANSTPQGNPSGQSRTTDVHSDFKKSFV 60
VTSPDARLQRPEYLGGNR+PI +++I Q SGT + +TPQG GQS TTD HSDF KSF
Sbjct 345 VTSPDARLQRPEYLGGNRVPINVNQIVQQSGTQSGTTPQGTVVGQSLTTDKHSDFTKSFT 404
Query 61 EHGFIIGVMVARYDHTYQQGLERFWSRKGRLDYYWPVFANIGEQAVLNKEIYAQGNGTDD 120
EHG IIGVMVARYDHTYQQGL R WSRK + D+YWPVFANIGEQA+ NKEI+AQGN D+
Sbjct 405 EHGLIIGVMVARYDHTYQQGLNRLWSRKDKFDFYWPVFANIGEQAIKNKEIFAQGNDKDN 464
Query 121 EVFGYQEAWADYRYKPNRVTGEMRSQAPQSLDVWHLGDDYSKLPSLSDSWVQEDSAVVNR 180
EVFGYQEAWA+YRYKPN VTGEMRS QSLDVWHL DDYS LPSLSDSW++ED A ++R
Sbjct 465 EVFGYQEAWAEYRYKPNMVTGEMRSAYAQSLDVWHLADDYSTLPSLSDSWIREDKANIDR 524
Query 181 VIAVSEENSNQLWADIFIKNKCTRAMPMYSIPGLIDHH 218
V+AV+ SNQ +ADI++KN CTR MPMYS+PGLIDHH
Sbjct 525 VLAVTSAVSNQFFADIYVKNYCTRPMPMYSVPGLIDHH 562
> Gokush_Human_feces_A_029_Microviridae_AG0226_putative.VP1
Length=470
Score = 348 bits (894), Expect = 3e-120, Method: Compositional matrix adjust.
Identities = 160/218 (73%), Positives = 184/218 (84%), Gaps = 0/218 (0%)
Query 1 VTSPDARLQRPEYLGGNRIPIVISEINQTSGTSANSTPQGNPSGQSRTTDVHSDFKKSFV 60
VTSPDARLQRPEYLGGNRIPI I+++ Q SGT + TPQG + S TTDVH +F KSFV
Sbjct 253 VTSPDARLQRPEYLGGNRIPITINQVVQNSGTMSGETPQGTTTAYSLTTDVHQEFTKSFV 312
Query 61 EHGFIIGVMVARYDHTYQQGLERFWSRKGRLDYYWPVFANIGEQAVLNKEIYAQGNGTDD 120
EHGFIIGVMVARYDHTYQQGLERFWSRK R D+YWPVFANIGEQA+LNKEIYA G +D
Sbjct 313 EHGFIIGVMVARYDHTYQQGLERFWSRKDRFDFYWPVFANIGEQAILNKEIYATGKDSDS 372
Query 121 EVFGYQEAWADYRYKPNRVTGEMRSQAPQSLDVWHLGDDYSKLPSLSDSWVQEDSAVVNR 180
EVFGYQEAWADYRYKP+RV+GEMRS A LD WHL DDY LP+LSDSW++E+S VNR
Sbjct 373 EVFGYQEAWADYRYKPSRVSGEMRSNAKTPLDSWHLADDYDVLPTLSDSWIREESNNVNR 432
Query 181 VIAVSEENSNQLWADIFIKNKCTRAMPMYSIPGLIDHH 218
V+AV+ E SNQL+ D++++N+ TR MP+YSIPGLIDHH
Sbjct 433 VLAVTSEVSNQLFCDLYVQNRTTRPMPVYSIPGLIDHH 470
> Gokush_Human_feces_A_013_Microviridae_AG009_putative.VP1
Length=587
Score = 341 bits (874), Expect = 8e-116, Method: Compositional matrix adjust.
Identities = 160/220 (73%), Positives = 186/220 (85%), Gaps = 2/220 (1%)
Query 1 VTSPDARLQRPEYLGGNRIPIVISEINQ--TSGTSANSTPQGNPSGQSRTTDVHSDFKKS 58
VTSPDARLQRPEYLGGNR+PI I+++ Q +G+ ++STPQG G S+TTD +SDF KS
Sbjct 368 VTSPDARLQRPEYLGGNRVPININQVIQQSGTGSESSSTPQGTVVGMSQTTDTNSDFTKS 427
Query 59 FVEHGFIIGVMVARYDHTYQQGLERFWSRKGRLDYYWPVFANIGEQAVLNKEIYAQGNGT 118
F EHGFIIGVMVARYDHTYQQGL+R WSRK + D+YWPVFANIGEQA+ NKE+YAQG
Sbjct 428 FTEHGFIIGVMVARYDHTYQQGLDRLWSRKDKFDFYWPVFANIGEQAIKNKELYAQGTAE 487
Query 119 DDEVFGYQEAWADYRYKPNRVTGEMRSQAPQSLDVWHLGDDYSKLPSLSDSWVQEDSAVV 178
DDEVFGYQEAWA+YRYKPNRVTGEMRS +SLD+WHL DDYSKLPSLS W+QEDS+ V
Sbjct 488 DDEVFGYQEAWAEYRYKPNRVTGEMRSSYAKSLDIWHLADDYSKLPSLSAEWIQEDSSTV 547
Query 179 NRVIAVSEENSNQLWADIFIKNKCTRAMPMYSIPGLIDHH 218
NRV+A S+ + Q +ADI++KN CTR MPMYSIPGLIDHH
Sbjct 548 NRVLAASDNLAAQFFADIYVKNLCTRPMPMYSIPGLIDHH 587
> Gokush_Human_feces_B_029_Microviridae_AG0417_putative.VP1
Length=530
Score = 276 bits (706), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 131/218 (60%), Positives = 161/218 (74%), Gaps = 3/218 (1%)
Query 1 VTSPDARLQRPEYLGGNRIPIVISEINQTSGTSANSTPQGNPSGQSRTTDVHSDFKKSFV 60
V SPD+R+Q PEYLGG R+PI +S++ QTS T + S P GN + S TT F KSF
Sbjct 316 VISPDSRMQIPEYLGGYRLPINVSQVIQTSSTDSTS-PLGNTAALSVTTMNKPMFTKSFT 374
Query 61 EHGFIIGVMVARYDHTYQQGLERFWSRKGRLDYYWPVFANIGEQAVLNKEIYAQGNGTDD 120
EHGFI+G+ V R D TYQQG+ER WSRKGR DYYWPV ANIGEQA+LNKEIYAQG+ D+
Sbjct 375 EHGFIMGLAVVRTDQTYQQGIERMWSRKGRYDYYWPVLANIGEQAILNKEIYAQGSAKDE 434
Query 121 EVFGYQEAWADYRYKPNRVTGEMRSQAPQSLDVWHLGDDYSKLPSLSDSWVQEDSAVVNR 180
E FGYQEAWADYRYKP++VT RS A QSLD WH DY++LP+LS +W+++ +A + R
Sbjct 435 EAFGYQEAWADYRYKPSKVTALFRSNAQQSLDAWHYAQDYNELPTLSTAWMEQSNAEMKR 494
Query 181 VIAVSEENSNQLWADIFIKNKCTRAMPMYSIPGLIDHH 218
+A S++ AD + NK TR MP+YSIPGLIDHH
Sbjct 495 TLARSDQPD--FIADFYFMNKTTRCMPVYSIPGLIDHH 530
> Gokush_Human_feces_D_014_Microviridae_AG029_putative.VP1
Length=578
Score = 273 bits (698), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 131/220 (60%), Positives = 157/220 (71%), Gaps = 2/220 (1%)
Query 1 VTSPDARLQRPEYLGGNRIPIVISEINQTSGTSANSTPQGNPSGQSRTTDVHSDFKKSFV 60
VTSPDARLQRPEYLGG RIPI I ++ QTSGT+ +TPQGN S T S FK SFV
Sbjct 359 VTSPDARLQRPEYLGGERIPINIDQVIQTSGTAEGTTPQGNTGAYSLTGSQGSYFKHSFV 418
Query 61 EHGFIIGVMVARYDHTYQQGLERFWSRKGRLDYYWPVFANIGEQAVLNKEIYAQGN-GTD 119
EHG+++G+ R +HTYQQGLE+ W+RK R D+YWP ANIGEQA+LNKEIY Q + T+
Sbjct 419 EHGYVLGLACVRTEHTYQQGLEKIWNRKNRFDFYWPALANIGEQAILNKEIYLQASKATN 478
Query 120 DEVFGYQEAWADYRYKPNRVTGEMRSQAPQ-SLDVWHLGDDYSKLPSLSDSWVQEDSAVV 178
+E FGYQEAWA+YRYKP+RV+ RS SLD WH D Y +LP LS W+QE V
Sbjct 479 EEAFGYQEAWAEYRYKPSRVSSAFRSNIETGSLDAWHYADYYEELPKLSAEWIQETYKNV 538
Query 179 NRVIAVSEENSNQLWADIFIKNKCTRAMPMYSIPGLIDHH 218
+R +AV +Q AD + K KCTR MP+YSIPGLIDHH
Sbjct 539 DRTLAVQSTLEDQYIADFWFKCKCTRPMPIYSIPGLIDHH 578
> Gokush_Human_feces_A_019_Microviridae_AG0438_putative.VP1
Length=569
Score = 270 bits (691), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 131/215 (61%), Positives = 157/215 (73%), Gaps = 2/215 (1%)
Query 5 DARLQRPEYLGGNRIPIVISEINQTSGTSANSTPQGNPSGQSRTTDVHSDFKKSFVEHGF 64
D +Q PEYLGG+RI I +S++ QTSGT+ + +PQGN S S T S F KSF EHGF
Sbjct 356 DKTVQIPEYLGGDRIMINMSQVVQTSGTT-DVSPQGNVSAMSVTGFGKSAFTKSFEEHGF 414
Query 65 IIGVMVARYDHTYQQGLERFWSRKGRLDYYWPVFANIGEQAVLNKEIYAQGNGTDDEVFG 124
IIGV R+DHTYQQGLER +SRK +LDYY+PVFAN+GEQAVL KE+YAQG TD+E FG
Sbjct 415 IIGVCCVRHDHTYQQGLERMFSRKNKLDYYFPVFANLGEQAVLKKELYAQGTETDNEAFG 474
Query 125 YQEAWADYRYKPNRVTGEMRSQAPQSLDVWHLGDDYSKLPSLSDSWVQEDSAVVNRVIAV 184
YQE WADYR KPNR+ G RS A +LD WH GD+YS P+LS W++E SA + R +AV
Sbjct 475 YQECWADYRMKPNRICGAFRSNATGTLDSWHYGDNYSNTPALSQEWMKEGSAEIARTLAV 534
Query 185 SEE-NSNQLWADIFIKNKCTRAMPMYSIPGLIDHH 218
+ N Q ADI +KN R MPMYS+PGLIDHH
Sbjct 535 ENKVNEPQFIADILVKNTTVRPMPMYSVPGLIDHH 569
Lambda K H a alpha
0.316 0.133 0.408 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 16840098