bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: Microviridae_proteins.fasta
           575 sequences; 147,441 total letters





Query= Contig-2_CDS_annotation_glimmer3.pl_2_4

Length=75
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  Alpavirinae_Human_feces_E_011_Microviridae_AG0385_putative.VP4      21.2    1.7
  Gokush_Human_gut_33_003_Microviridae_AG061_putative.VP1             20.4    3.4
  Gokush_Human_feces_E_009_Microviridae_AG0283_putative.VP2           20.0    4.3
  Gokush_Human_feces_B_029_Microviridae_AG0416_putative.VP4           19.2    7.6
  Gokush_Human_feces_E_007_Microviridae_AG0414_putative.VP4           18.9    9.4


> Alpavirinae_Human_feces_E_011_Microviridae_AG0385_putative.VP4
Length=611

 Score = 21.2 bits (43),  Expect = 1.7, Method: Compositional matrix adjust.
 Identities = 8/18 (44%), Positives = 11/18 (61%), Gaps = 0/18 (0%)

Query  35   RSYLASNFPNYQSSVFRV  52
            R YL  + PN+ S  FR+
Sbjct  397  RGYLGIDTPNFGSDDFRL  414


> Gokush_Human_gut_33_003_Microviridae_AG061_putative.VP1
Length=545

 Score = 20.4 bits (41),  Expect = 3.4, Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 11/25 (44%), Gaps = 0/25 (0%)

Query  22   AYSGFRSNANRKFRSYLASNFPNYQ  46
            AY G R     KF  Y  S+ P  Q
Sbjct  182  AYKGGRCLPVNKFHDYFTSSLPFAQ  206


> Gokush_Human_feces_E_009_Microviridae_AG0283_putative.VP2
Length=294

 Score = 20.0 bits (40),  Expect = 4.3, Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 18/38 (47%), Gaps = 0/38 (0%)

Query  29   NANRKFRSYLASNFPNYQSSVFRVLTYSSIMSMLHGYP  66
            N  R    YL  N+PN  +++   L  ++  S ++  P
Sbjct  241  NLERYNEEYLRKNYPNTTAALLSSLYEATTGSKVNDDP  278


> Gokush_Human_feces_B_029_Microviridae_AG0416_putative.VP4
Length=292

 Score = 19.2 bits (38),  Expect = 7.6, Method: Composition-based stats.
 Identities = 9/23 (39%), Positives = 13/23 (57%), Gaps = 4/23 (17%)

Query  13   YQKGYITIYAYSGFRSNANRKFR  35
            Y  GY+T  AY     N N+++R
Sbjct  166  YVAGYVTKKAY----GNDNKRYR  184


> Gokush_Human_feces_E_007_Microviridae_AG0414_putative.VP4
Length=298

 Score = 18.9 bits (37),  Expect = 9.4, Method: Composition-based stats.
 Identities = 9/24 (38%), Positives = 14/24 (58%), Gaps = 2/24 (8%)

Query  9    QVYYYQKGYIT--IYAYSGFRSNA  30
            + Y Y  GY+T  +Y   G ++NA
Sbjct  167  ETYRYVAGYVTKKMYELDGKKANA  190



Lambda      K        H        a         alpha
   0.323    0.133    0.399    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 3646980