bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-31_CDS_annotation_glimmer3.pl_2_1
Length=166
Score E
Sequences producing significant alignments: (Bits) Value
Gokush_Human_gut_33_018_Microviridae_AG0170_putative.VP3 297 4e-105
Gokush_Human_gut_37_015_Microviridae_AG032_putative.VP3 290 3e-102
Gokush_Human_gut_36_019_Microviridae_AG0278_putative.VP3 290 3e-102
Gokush_Human_gut_35_025_Microviridae_AG0360_putative.VP3 290 3e-102
Gokush_Human_gut_34_012_Microviridae_AG057_putative.VP3 290 3e-102
Gokush_Human_feces_E_010_Microviridae_AG0122_putative.VP3 77.8 5e-20
Gokush_Human_gut_33_023_Microviridae_AG0365_putative.VP3 65.1 2e-15
Gokush_68_Microbialite_003_Microviridae_AG0160_putative.VP3 64.7 2e-15
Gokush_Bourget_248_Microviridae_AG0253_putative.VP3 63.2 7e-15
Gokush_gi|12085142|ref|NP_073544.1|_minor_capsid_protein_[Bdell... 62.4 1e-14
> Gokush_Human_gut_33_018_Microviridae_AG0170_putative.VP3
Length=166
Score = 297 bits (760), Expect = 4e-105, Method: Compositional matrix adjust.
Identities = 144/166 (87%), Positives = 151/166 (91%), Gaps = 0/166 (0%)
Query 1 MPKFFTKYNPPEVLGFSSDLPSKVQEQFADACQTDTIIRKYNMMGVNPFIASGGSQYLDT 60
MPKFFTKY PP+V GFSSD PSKVQEQFADACQTDTIIRKYNMMGVNPFIASGGSQYLDT
Sbjct 1 MPKFFTKYTPPKVAGFSSDQPSKVQEQFADACQTDTIIRKYNMMGVNPFIASGGSQYLDT 60
Query 61 TQIPDFICASNAQVKVKEYFEGLPADIRLEFNNDPMQFAEVVSDPRNTDYLRDIGVLAPL 120
TQIP F+ A NAQVKVKEYFEGLP+DIRLEFNNDP+QFAEVVSDPRN +YLR+IGVLAPL
Sbjct 61 TQIPSFVAAQNAQVKVKEYFEGLPSDIRLEFNNDPIQFAEVVSDPRNAEYLREIGVLAPL 120
Query 121 PAEQEGEKHSAQSGDNSKKAPQPSEGSDLFAGKEPEKAVSPEKSNG 166
P EQEGEK A SGDNS+KAP SEGSDLF KEPEKAVSPEKSNG
Sbjct 121 PGEQEGEKQLAPSGDNSEKAPHASEGSDLFGQKEPEKAVSPEKSNG 166
> Gokush_Human_gut_37_015_Microviridae_AG032_putative.VP3
Length=166
Score = 290 bits (741), Expect = 3e-102, Method: Compositional matrix adjust.
Identities = 138/166 (83%), Positives = 154/166 (93%), Gaps = 0/166 (0%)
Query 1 MPKFFTKYNPPEVLGFSSDLPSKVQEQFADACQTDTIIRKYNMMGVNPFIASGGSQYLDT 60
MPKFFTKYNPP++ GFSS++ SKVQEQFADAC+TDTIIRKYNMMGVNPFIA+GGSQYLDT
Sbjct 1 MPKFFTKYNPPKIPGFSSEMESKVQEQFADACRTDTIIRKYNMMGVNPFIAAGGSQYLDT 60
Query 61 TQIPDFICASNAQVKVKEYFEGLPADIRLEFNNDPMQFAEVVSDPRNTDYLRDIGVLAPL 120
TQIPDFICA NAQ+KVKEYFEGLP+DIRLEFNNDPMQFAE+VSDP+N DYLR+IGVLAPL
Sbjct 61 TQIPDFICAQNAQIKVKEYFEGLPSDIRLEFNNDPMQFAEIVSDPKNADYLREIGVLAPL 120
Query 121 PAEQEGEKHSAQSGDNSKKAPQPSEGSDLFAGKEPEKAVSPEKSNG 166
PAE+EG+K S+Q GD S+KAPQPSEGS+LF KE EK VSP KSNG
Sbjct 121 PAEKEGDKPSSQQGDISEKAPQPSEGSELFTQKEAEKPVSPGKSNG 166
> Gokush_Human_gut_36_019_Microviridae_AG0278_putative.VP3
Length=166
Score = 290 bits (741), Expect = 3e-102, Method: Compositional matrix adjust.
Identities = 138/166 (83%), Positives = 154/166 (93%), Gaps = 0/166 (0%)
Query 1 MPKFFTKYNPPEVLGFSSDLPSKVQEQFADACQTDTIIRKYNMMGVNPFIASGGSQYLDT 60
MPKFFTKYNPP++ GFSS++ SKVQEQFADAC+TDTIIRKYNMMGVNPFIA+GGSQYLDT
Sbjct 1 MPKFFTKYNPPKIPGFSSEMESKVQEQFADACRTDTIIRKYNMMGVNPFIAAGGSQYLDT 60
Query 61 TQIPDFICASNAQVKVKEYFEGLPADIRLEFNNDPMQFAEVVSDPRNTDYLRDIGVLAPL 120
TQIPDFICA NAQ+KVKEYFEGLP+DIRLEFNNDPMQFAE+VSDP+N DYLR+IGVLAPL
Sbjct 61 TQIPDFICAQNAQIKVKEYFEGLPSDIRLEFNNDPMQFAEIVSDPKNADYLREIGVLAPL 120
Query 121 PAEQEGEKHSAQSGDNSKKAPQPSEGSDLFAGKEPEKAVSPEKSNG 166
PAE+EG+K S+Q GD S+KAPQPSEGS+LF KE EK VSP KSNG
Sbjct 121 PAEKEGDKPSSQQGDISEKAPQPSEGSELFTQKEAEKPVSPGKSNG 166
> Gokush_Human_gut_35_025_Microviridae_AG0360_putative.VP3
Length=166
Score = 290 bits (741), Expect = 3e-102, Method: Compositional matrix adjust.
Identities = 138/166 (83%), Positives = 154/166 (93%), Gaps = 0/166 (0%)
Query 1 MPKFFTKYNPPEVLGFSSDLPSKVQEQFADACQTDTIIRKYNMMGVNPFIASGGSQYLDT 60
MPKFFTKYNPP++ GFSS++ SKVQEQFADAC+TDTIIRKYNMMGVNPFIA+GGSQYLDT
Sbjct 1 MPKFFTKYNPPKIPGFSSEMESKVQEQFADACRTDTIIRKYNMMGVNPFIAAGGSQYLDT 60
Query 61 TQIPDFICASNAQVKVKEYFEGLPADIRLEFNNDPMQFAEVVSDPRNTDYLRDIGVLAPL 120
TQIPDFICA NAQ+KVKEYFEGLP+DIRLEFNNDPMQFAE+VSDP+N DYLR+IGVLAPL
Sbjct 61 TQIPDFICAQNAQIKVKEYFEGLPSDIRLEFNNDPMQFAEIVSDPKNADYLREIGVLAPL 120
Query 121 PAEQEGEKHSAQSGDNSKKAPQPSEGSDLFAGKEPEKAVSPEKSNG 166
PAE+EG+K S+Q GD S+KAPQPSEGS+LF KE EK VSP KSNG
Sbjct 121 PAEKEGDKPSSQQGDISEKAPQPSEGSELFTQKEAEKPVSPGKSNG 166
> Gokush_Human_gut_34_012_Microviridae_AG057_putative.VP3
Length=166
Score = 290 bits (741), Expect = 3e-102, Method: Compositional matrix adjust.
Identities = 138/166 (83%), Positives = 154/166 (93%), Gaps = 0/166 (0%)
Query 1 MPKFFTKYNPPEVLGFSSDLPSKVQEQFADACQTDTIIRKYNMMGVNPFIASGGSQYLDT 60
MPKFFTKYNPP++ GFSS++ SKVQEQFADAC+TDTIIRKYNMMGVNPFIA+GGSQYLDT
Sbjct 1 MPKFFTKYNPPKIPGFSSEMESKVQEQFADACRTDTIIRKYNMMGVNPFIAAGGSQYLDT 60
Query 61 TQIPDFICASNAQVKVKEYFEGLPADIRLEFNNDPMQFAEVVSDPRNTDYLRDIGVLAPL 120
TQIPDFICA NAQ+KVKEYFEGLP+DIRLEFNNDPMQFAE+VSDP+N DYLR+IGVLAPL
Sbjct 61 TQIPDFICAQNAQIKVKEYFEGLPSDIRLEFNNDPMQFAEIVSDPKNADYLREIGVLAPL 120
Query 121 PAEQEGEKHSAQSGDNSKKAPQPSEGSDLFAGKEPEKAVSPEKSNG 166
PAE+EG+K S+Q GD S+KAPQPSEGS+LF KE EK VSP KSNG
Sbjct 121 PAEKEGDKPSSQQGDISEKAPQPSEGSELFTQKEAEKPVSPGKSNG 166
> Gokush_Human_feces_E_010_Microviridae_AG0122_putative.VP3
Length=149
Score = 77.8 bits (190), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 38/101 (38%), Positives = 55/101 (54%), Gaps = 2/101 (2%)
Query 21 PSKVQEQFADACQTDTIIRKYNMMG--VNPFIASGGSQYLDTTQIPDFICASNAQVKVKE 78
PS Q+ F D D I++KY G +PF+ Q+ D + + DF A NA + E
Sbjct 20 PSMTQQHFKDETMIDNILQKYAETGFLTDPFVPKRPIQFGDFSGVTDFQTAQNAVARATE 79
Query 79 YFEGLPADIRLEFNNDPMQFAEVVSDPRNTDYLRDIGVLAP 119
YFE LP+ IR FNN P +F + + DP+ L ++G +AP
Sbjct 80 YFESLPSHIRASFNNSPSEFLQALDDPQQRSRLEELGFVAP 120
> Gokush_Human_gut_33_023_Microviridae_AG0365_putative.VP3
Length=153
Score = 65.1 bits (157), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 31/104 (30%), Positives = 54/104 (52%), Gaps = 0/104 (0%)
Query 15 GFSSDLPSKVQEQFADACQTDTIIRKYNMMGVNPFIASGGSQYLDTTQIPDFICASNAQV 74
G + PS + A C I+ ++N G+ +ASG QY D +++PD+ A +
Sbjct 16 GITFTEPSMALQSAAPECDIYNILNQFNTTGIVTHVASGTPQYSDVSEVPDYQAAMEIIM 75
Query 75 KVKEYFEGLPADIRLEFNNDPMQFAEVVSDPRNTDYLRDIGVLA 118
+E F LP+ +R EF+NDP + E + +P N + ++G+
Sbjct 76 TAEEQFSALPSHVRREFDNDPGKMLEFIQNPDNYERGVELGLFV 119
> Gokush_68_Microbialite_003_Microviridae_AG0160_putative.VP3
Length=159
Score = 64.7 bits (156), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 47/90 (52%), Gaps = 0/90 (0%)
Query 20 LPSKVQEQFADACQTDTIIRKYNMMGVNPFIASGGSQYLDTTQIPDFICASNAQVKVKEY 79
+PSK + F C + I+ KY G + Y D + I D A N + +E
Sbjct 32 MPSKTDQSFKKDCDVNHIMDKYTKTGHLTHMQQKQGMYADVSMIEDLGQAYNDVQRAEEA 91
Query 80 FEGLPADIRLEFNNDPMQFAEVVSDPRNTD 109
FE LP+ +R +F+NDP++F E + DP+N D
Sbjct 92 FESLPSKLRNKFDNDPVKFVEFMQDPKNMD 121
> Gokush_Bourget_248_Microviridae_AG0253_putative.VP3
Length=145
Score = 63.2 bits (152), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 1/109 (1%)
Query 15 GFSSDLPSKVQEQFADACQTDTIIRKYNMMGVNPFIASGGSQYLDTTQIPDFICASNAQV 74
G + S Q+ + + C +TI++K+N+ G+ P + +Y D T I D+ A N +
Sbjct 24 GLHCEDASLAQQHYKEECDINTILQKFNITGLLP-EQTLSPRYGDFTGIGDYHTAMNRVL 82
Query 75 KVKEYFEGLPADIRLEFNNDPMQFAEVVSDPRNTDYLRDIGVLAPLPAE 123
V++ FE LPA IR F+NDP Q E + + N +G++ AE
Sbjct 83 AVQDEFEALPAQIRARFDNDPAQLIEFMENSENRPEAEKLGLVEKATAE 131
> Gokush_gi|12085142|ref|NP_073544.1|_minor_capsid_protein_[Bdellovibrio_phage_phiMH2K]
Length=151
Score = 62.4 bits (150), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/146 (25%), Positives = 69/146 (47%), Gaps = 3/146 (2%)
Query 1 MPKFFTKYNPPEVLGFSSDLPSKVQEQFADACQTDTIIRKYNMMGVNPFIASGGSQYLDT 60
M K + N +++ ++LP + + F C + I++K+ G +A Y D
Sbjct 1 MKKIELRPNGTKLVHTVNELPPETDQSFGKECDINFIVKKFIKTGQITHLARRQGFYGDQ 60
Query 61 TQIPDFICASNAQVKVKEYFEGLPADIRLEFNNDPMQFAEVVSDPRNTDYLRDIGVLAPL 120
+ IPDF A + K ++ F+ LPA +R F N P + + + DP+N D +G++ +
Sbjct 61 SSIPDFQTAMDTVTKAQQAFDELPAHMRKRFANSPHELMQFLQDPKNRDEAISLGLMEMV 120
Query 121 PAEQEGEKHSAQSGDNSKKAPQPSEG 146
Q+ + + + + P P+ G
Sbjct 121 ETPQQAPQSTT---NQTTTKPAPASG 143
Lambda K H a alpha
0.312 0.131 0.380 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 11626264