bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-31_CDS_annotation_glimmer3.pl_2_2
Length=76
Score E
Sequences producing significant alignments: (Bits) Value
Gokush_Human_gut_37_015_Microviridae_AG035_putative.AF306496_8.Vp5 59.3 1e-14
Gokush_Human_gut_36_019_Microviridae_AG0281_putative.AF306496_8... 59.3 1e-14
Gokush_Human_gut_35_025_Microviridae_AG0359_putative.AF306496_8... 59.3 1e-14
Gokush_Human_gut_34_012_Microviridae_AG060_putative.AF306496_8.Vp5 59.3 1e-14
Gokush_Human_gut_33_018_Microviridae_AG0173_putative.nonstructu... 58.2 2e-14
Gokush_Human_feces_B_068_Microviridae_AG0329_putative.AF306496_... 39.7 2e-07
Gokush_gi|12085143|ref|NP_073545.1|_nonstructural_protein_[Bdel... 38.9 2e-07
Gokush_gi|9634956|ref|NP_054654.1|_nonstructural_protein_[Chlam... 37.0 1e-06
Gokush_gi|47566148|ref|YP_022486.1|_nonstructural_protein_[Chla... 37.0 1e-06
Gokush_gi|77020122|ref|YP_338245.1|_putative_non-structural_pro... 37.0 1e-06
> Gokush_Human_gut_37_015_Microviridae_AG035_putative.AF306496_8.Vp5
Length=88
Score = 59.3 bits (142), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 44/67 (66%), Gaps = 2/67 (3%)
Query 1 MTEINLEVAVRNFREGARKNPQIGAFPSDYELHHVGYFDDETGQVLPVSSNVLETGNHIV 60
MTEIN + A+RNF+ GA++N QI + P DY L +G DDETG + PV + + I+
Sbjct 21 MTEINPDSAIRNFKIGAKQNQQINSCPEDYCLVLLGTVDDETGSINPV--DTADGSPAIL 78
Query 61 IRAEEVF 67
+A+++F
Sbjct 79 FQAKDLF 85
> Gokush_Human_gut_36_019_Microviridae_AG0281_putative.AF306496_8.Vp5
Length=88
Score = 59.3 bits (142), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 44/67 (66%), Gaps = 2/67 (3%)
Query 1 MTEINLEVAVRNFREGARKNPQIGAFPSDYELHHVGYFDDETGQVLPVSSNVLETGNHIV 60
MTEIN + A+RNF+ GA++N QI + P DY L +G DDETG + PV + + I+
Sbjct 21 MTEINPDSAIRNFKIGAKQNQQINSCPEDYCLVLLGTVDDETGSINPV--DTADGSPAIL 78
Query 61 IRAEEVF 67
+A+++F
Sbjct 79 FQAKDLF 85
> Gokush_Human_gut_35_025_Microviridae_AG0359_putative.AF306496_8.Vp5
Length=88
Score = 59.3 bits (142), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 44/67 (66%), Gaps = 2/67 (3%)
Query 1 MTEINLEVAVRNFREGARKNPQIGAFPSDYELHHVGYFDDETGQVLPVSSNVLETGNHIV 60
MTEIN + A+RNF+ GA++N QI + P DY L +G DDETG + PV + + I+
Sbjct 21 MTEINPDSAIRNFKIGAKQNQQINSCPEDYCLVLLGTVDDETGSINPV--DTADGSPAIL 78
Query 61 IRAEEVF 67
+A+++F
Sbjct 79 FQAKDLF 85
> Gokush_Human_gut_34_012_Microviridae_AG060_putative.AF306496_8.Vp5
Length=88
Score = 59.3 bits (142), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 44/67 (66%), Gaps = 2/67 (3%)
Query 1 MTEINLEVAVRNFREGARKNPQIGAFPSDYELHHVGYFDDETGQVLPVSSNVLETGNHIV 60
MTEIN + A+RNF+ GA++N QI + P DY L +G DDETG + PV + + I+
Sbjct 21 MTEINPDSAIRNFKIGAKQNQQINSCPEDYCLVLLGTVDDETGSINPV--DTADGSPAIL 78
Query 61 IRAEEVF 67
+A+++F
Sbjct 79 FQAKDLF 85
> Gokush_Human_gut_33_018_Microviridae_AG0173_putative.nonstructural.protein
Length=68
Score = 58.2 bits (139), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 44/67 (66%), Gaps = 2/67 (3%)
Query 1 MTEINLEVAVRNFREGARKNPQIGAFPSDYELHHVGYFDDETGQVLPVSSNVLETGNHIV 60
MTE+N + A+RNF+ GA KN QI A P DY L +G +DETG + PV ++ + I+
Sbjct 1 MTEVNPDSAIRNFKVGAIKNQQINACPEDYCLVLLGTVNDETGSLAPVETD--DGSPAIL 58
Query 61 IRAEEVF 67
+A+++F
Sbjct 59 FQAKDLF 65
> Gokush_Human_feces_B_068_Microviridae_AG0329_putative.AF306496_8.Vp5
Length=97
Score = 39.7 bits (91), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query 3 EINLEVAVRNFREG-ARKNPQIGAFPSDYELHHVGYFDDETGQVL 46
+IN A+RNFR R + I PSDY L+ +G +D +TG+++
Sbjct 21 DINDAAAMRNFRVAILRSSDSIHYMPSDYSLYRLGLYDSDTGRLI 65
> Gokush_gi|12085143|ref|NP_073545.1|_nonstructural_protein_[Bdellovibrio_phage_phiMH2K]
Length=84
Score = 38.9 bits (89), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/64 (38%), Positives = 40/64 (63%), Gaps = 9/64 (14%)
Query 9 AVRNFREGARKNPQ--IGAFPSDYELHHVGYFDDETGQVLPVSSNVLETGNHIVIRAEEV 66
A R+F++ A K+PQ + P D++L H+G +DD+TG++ P L+T H V +A ++
Sbjct 28 AERSFQQLA-KDPQSTVANHPEDFDLFHLGEYDDQTGKLTP-----LDTPEHCV-KAIDL 80
Query 67 FKNQ 70
K Q
Sbjct 81 IKQQ 84
> Gokush_gi|9634956|ref|NP_054654.1|_nonstructural_protein_[Chlamydia_phage_2]
Length=84
Score = 37.0 bits (84), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 19/52 (37%), Positives = 28/52 (54%), Gaps = 4/52 (8%)
Query 9 AVRNFREGARKNP---QIGAFPSDYELHHVGYFDDETGQVLPVS-SNVLETG 56
A+R F + ++P Q A P DY L+ +G +DD TG +P+ L TG
Sbjct 26 AIRAFSDMVNEDPTKNQFAAHPEDYILYEIGSYDDSTGTFIPLDVPKALGTG 77
> Gokush_gi|47566148|ref|YP_022486.1|_nonstructural_protein_[Chlamydia_phage_3]
Length=84
Score = 37.0 bits (84), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 19/52 (37%), Positives = 28/52 (54%), Gaps = 4/52 (8%)
Query 9 AVRNFREGARKNP---QIGAFPSDYELHHVGYFDDETGQVLPVS-SNVLETG 56
A+R F + ++P Q A P DY L+ +G +DD TG +P+ L TG
Sbjct 26 AIRAFSDMVNEDPTKNQFAAHPEDYILYEIGSYDDSTGTFIPLDVPKALGTG 77
> Gokush_gi|77020122|ref|YP_338245.1|_putative_non-structural_protein_[Chlamydia_phage_4]
Length=84
Score = 37.0 bits (84), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 19/52 (37%), Positives = 28/52 (54%), Gaps = 4/52 (8%)
Query 9 AVRNFREGARKNP---QIGAFPSDYELHHVGYFDDETGQVLPVS-SNVLETG 56
A+R F + ++P Q A P DY L+ +G +DD TG +P+ L TG
Sbjct 26 AIRAFSDMVNEDPTKNQFAAHPEDYILYEIGSYDDSTGTFIPLDVPKALGTG 77
Lambda K H a alpha
0.314 0.132 0.369 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 3629730