bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-31_CDS_annotation_glimmer3.pl_2_4
Length=259
Score E
Sequences producing significant alignments: (Bits) Value
Gokush_Human_gut_35_025_Microviridae_AG0358_putative.VP2 196 4e-63
Gokush_Human_gut_34_012_Microviridae_AG059_putative.VP2 196 4e-63
Gokush_Human_gut_37_015_Microviridae_AG034_putative.VP2 194 2e-62
Gokush_Human_gut_36_019_Microviridae_AG0280_putative.VP2 194 2e-62
Gokush_Human_gut_33_018_Microviridae_AG0172_putative.VP2 192 1e-61
Gokush_Human_feces_C_031_Microviridae_AG0434_hypothetical.prote... 46.2 5e-08
Gokush_Human_feces_E_010_Microviridae_AG0121_putative.VP2 44.3 3e-07
Gokush_Bourget_504_Microviridae_AG0257_putative.VP2 42.4 2e-06
Gokush_Human_feces_D_014_Microviridae_AG027_putative.VP2 37.0 8e-05
Gokush_Human_feces_E_009_Microviridae_AG0283_putative.VP2 37.0 9e-05
> Gokush_Human_gut_35_025_Microviridae_AG0358_putative.VP2
Length=242
Score = 196 bits (498), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 110/211 (52%), Positives = 139/211 (66%), Gaps = 10/211 (5%)
Query 39 GSALGTGMGLVGSAKGLYDSFNNTSLKNQMAYDQFKSELDYQYWSRKMSNRHTLEVGDLR 98
GS +G +G A GLY+ S K Q ++++L + W +MSNRH LEVGDLR
Sbjct 24 GSGIGDILGFGSDALGLYNDLTGNSAKVQKDLMAYQAQLQNESWKYQMSNRHQLEVGDLR 83
Query 99 QAGLNPILSANSAGSVASAIPNGAIPETSS-----QQSAAGAAREANRINAMI--GESTS 151
AGLNPILSANSAGSVA+ IPNG++ ++ S + SAA A + A ++ ++I ST
Sbjct 84 NAGLNPILSANSAGSVAAGIPNGSLADSDSARYGARSSAALARQNAAQVASLIQTNASTQ 143
Query 152 AKNLADAQASIMNAETGRMVGIASARRANAEAGLAGTRMSNELAYPNNQPSLFKYINSGK 211
A+N A+A+A+IMNAE+ RM +A A R NAEAG A R NE YP+NQP FKY NS K
Sbjct 144 ARNEAEAKAAIMNAESNRMSAVAGANRNNAEAGYAAVRSKNEALYPSNQPLPFKYFNSAK 203
Query 212 QLV---EDLFDRNYGLPSNASPARRQRYEVF 239
+V ED DR YGLPSNASP RR+RYEVF
Sbjct 204 GMVDSIEDFLDRRYGLPSNASPERRKRYEVF 234
> Gokush_Human_gut_34_012_Microviridae_AG059_putative.VP2
Length=242
Score = 196 bits (498), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 110/211 (52%), Positives = 139/211 (66%), Gaps = 10/211 (5%)
Query 39 GSALGTGMGLVGSAKGLYDSFNNTSLKNQMAYDQFKSELDYQYWSRKMSNRHTLEVGDLR 98
GS +G +G A GLY+ S K Q ++++L + W +MSNRH LEVGDLR
Sbjct 24 GSGIGDILGFGSDALGLYNDLTGNSAKVQKDLMAYQAQLQNESWKYQMSNRHQLEVGDLR 83
Query 99 QAGLNPILSANSAGSVASAIPNGAIPETSS-----QQSAAGAAREANRINAMI--GESTS 151
AGLNPILSANSAGSVA+ IPNG++ ++ S + SAA A + A ++ ++I ST
Sbjct 84 NAGLNPILSANSAGSVAAGIPNGSLADSDSARYGARSSAALARQNAAQVASLIQTNASTQ 143
Query 152 AKNLADAQASIMNAETGRMVGIASARRANAEAGLAGTRMSNELAYPNNQPSLFKYINSGK 211
A+N A+A+A+IMNAE+ RM +A A R NAEAG A R NE YP+NQP FKY NS K
Sbjct 144 ARNEAEAKAAIMNAESNRMSAVAGANRNNAEAGYAAVRSKNEALYPSNQPLPFKYFNSAK 203
Query 212 QLV---EDLFDRNYGLPSNASPARRQRYEVF 239
+V ED DR YGLPSNASP RR+RYEVF
Sbjct 204 GMVDSIEDFLDRRYGLPSNASPERRKRYEVF 234
> Gokush_Human_gut_37_015_Microviridae_AG034_putative.VP2
Length=242
Score = 194 bits (494), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 109/211 (52%), Positives = 138/211 (65%), Gaps = 10/211 (5%)
Query 39 GSALGTGMGLVGSAKGLYDSFNNTSLKNQMAYDQFKSELDYQYWSRKMSNRHTLEVGDLR 98
GS +G +G A G Y+ S K Q ++++L + W +MSNRH LEVGDLR
Sbjct 24 GSGIGDILGFGSDALGFYNDLTGNSAKVQKDLMAYQAQLQNESWKYQMSNRHQLEVGDLR 83
Query 99 QAGLNPILSANSAGSVASAIPNGAIPETSS-----QQSAAGAAREANRINAMI--GESTS 151
AGLNPILSANSAGSVA+ IPNG++ ++ S + SAA A + A ++ ++I ST
Sbjct 84 NAGLNPILSANSAGSVAAGIPNGSLADSDSARYGARSSAALARQNAAQVASLIQTNASTQ 143
Query 152 AKNLADAQASIMNAETGRMVGIASARRANAEAGLAGTRMSNELAYPNNQPSLFKYINSGK 211
A+N A+A+A+IMNAE+ RM +A A R NAEAG A R NE YP+NQP FKY NS K
Sbjct 144 ARNEAEAKAAIMNAESNRMSAVAGANRNNAEAGYAAVRSKNEALYPSNQPLPFKYFNSAK 203
Query 212 QLV---EDLFDRNYGLPSNASPARRQRYEVF 239
+V ED DR YGLPSNASP RR+RYEVF
Sbjct 204 GMVDSIEDFLDRRYGLPSNASPERRKRYEVF 234
> Gokush_Human_gut_36_019_Microviridae_AG0280_putative.VP2
Length=242
Score = 194 bits (494), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 109/211 (52%), Positives = 138/211 (65%), Gaps = 10/211 (5%)
Query 39 GSALGTGMGLVGSAKGLYDSFNNTSLKNQMAYDQFKSELDYQYWSRKMSNRHTLEVGDLR 98
GS +G +G A G Y+ S K Q ++++L + W +MSNRH LEVGDLR
Sbjct 24 GSGIGDILGFGSDALGFYNDLTGNSAKVQKDLMAYQAQLQNESWKYQMSNRHQLEVGDLR 83
Query 99 QAGLNPILSANSAGSVASAIPNGAIPETSS-----QQSAAGAAREANRINAMI--GESTS 151
AGLNPILSANSAGSVA+ IPNG++ ++ S + SAA A + A ++ ++I ST
Sbjct 84 NAGLNPILSANSAGSVAAGIPNGSLADSDSARYGARSSAALARQNAAQVASLIQTNASTQ 143
Query 152 AKNLADAQASIMNAETGRMVGIASARRANAEAGLAGTRMSNELAYPNNQPSLFKYINSGK 211
A+N A+A+A+IMNAE+ RM +A A R NAEAG A R NE YP+NQP FKY NS K
Sbjct 144 ARNEAEAKAAIMNAESNRMSAVAGANRNNAEAGYAAVRSKNEALYPSNQPLPFKYFNSAK 203
Query 212 QLV---EDLFDRNYGLPSNASPARRQRYEVF 239
+V ED DR YGLPSNASP RR+RYEVF
Sbjct 204 GMVDSIEDFLDRRYGLPSNASPERRKRYEVF 234
> Gokush_Human_gut_33_018_Microviridae_AG0172_putative.VP2
Length=242
Score = 192 bits (488), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 107/211 (51%), Positives = 140/211 (66%), Gaps = 10/211 (5%)
Query 39 GSALGTGMGLVGSAKGLYDSFNNTSLKNQMAYDQFKSELDYQYWSRKMSNRHTLEVGDLR 98
GS +G MG A GLY+ S K Q ++++L W +MSNRH LEVGDLR
Sbjct 24 GSGIGDLMGFGSDALGLYNDLTGNSAKVQKELMAYQAQLQNASWKYQMSNRHQLEVGDLR 83
Query 99 QAGLNPILSANSAGSVASAIPNGAIPETSS-----QQSAAGAAREANRINAMI--GESTS 151
AGLNPILSANSAG +A+ IPNGA+ ++ S + SAA A + A ++ ++I ST
Sbjct 84 NAGLNPILSANSAGGIAAGIPNGALADSDSARYGARSSAALARQNAAQVASLIQTNASTQ 143
Query 152 AKNLADAQASIMNAETGRMVGIASARRANAEAGLAGTRMSNELAYPNNQPSLFKYINSGK 211
A+N A+A+A+IMNAE+ R+ +A A R NAEAG A R NE YP+NQP FKY+NS K
Sbjct 144 ARNEAEAKAAIMNAESNRLSAVAGANRNNAEAGYAAVRSKNEALYPSNQPLPFKYLNSAK 203
Query 212 QLVEDL---FDRNYGLPSNASPARRQRYEVF 239
+V+++ FDR YGLPSNASP RR+RYEV+
Sbjct 204 GMVDEIENWFDRRYGLPSNASPERRRRYEVY 234
> Gokush_Human_feces_C_031_Microviridae_AG0434_hypothetical.protein.BACEGG.02723
Length=206
Score = 46.2 bits (108), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 71/160 (44%), Gaps = 26/160 (16%)
Query 79 YQYWSRKMSNRHTLEVGDLRQAGLNPILSANSAGSVASAIPNGAIPETSSQQSAAGAARE 138
+++ M NRH EV DLR+AGLNPILSA +G+ +A P P+ AGA +
Sbjct 26 WKHQKEVMKNRHQWEVEDLRKAGLNPILSAGGSGAPGNA-PTIVAPDI------AGAMKS 78
Query 139 ANRINAMIGESTSAKNLADA---QASIMNAETGRMVGIASARRANAEAG-------LAGT 188
A S KNL DA Q + N+ G+ A+ A++ G
Sbjct 79 G----AEASTQHSEKNLKDALEKQTYVQNSALQADAGLKRAQSVAADSSSNLMWSQTKGQ 134
Query 189 RMSNELAYPNNQPSLFKYINSG-----KQLVEDLFDRNYG 223
++N++ N + + F NS ++LV D + G
Sbjct 135 EIANKIQEENLKQAKFMTQNSAIASEKQKLVFDYMKEHSG 174
> Gokush_Human_feces_E_010_Microviridae_AG0121_putative.VP2
Length=199
Score = 44.3 bits (103), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/64 (41%), Positives = 34/64 (53%), Gaps = 11/64 (17%)
Query 79 YQYWSRKMSNRHTLEVGDLRQAGLNPILSANSAGS-----------VASAIPNGAIPETS 127
+++ M NRH EV DLR+AGLNPILSA G+ VA A+ +GA E
Sbjct 26 WKHQKEAMKNRHQWEVEDLRKAGLNPILSAGGQGTPGNAPVIEPVDVAGAMHSGADTELK 85
Query 128 SQQS 131
Q+
Sbjct 86 EAQA 89
> Gokush_Bourget_504_Microviridae_AG0257_putative.VP2
Length=248
Score = 42.4 bits (98), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/246 (23%), Positives = 104/246 (42%), Gaps = 52/246 (21%)
Query 39 GSALGTGMGLVGSAKGLYDSFNNTSLKNQMAYDQFKSELDYQYWSRKMSNRHTLEVGDLR 98
G A G +G +G + +++ NQ + +Q + ++D+Q RK + +E D++
Sbjct 5 GGAFGGVLGFLGQQQTNQKNWDIAQAANQASAEQAQRQMDFQERMRKTQYQTAIE--DMQ 62
Query 99 QAGLNPILSANSAGSVASAIPNGAIPETSSQQ--SAAGAAREANRINAMI---------- 146
+AGLNP+L+ + G + P+GA+ + S+ + +A G+A + + AM
Sbjct 63 KAGLNPMLAYSQGG---AGTPSGAMGQVSTAKVGNAIGSALQGYQTMAMTHADLDLKDAT 119
Query 147 ----------GESTSAKNLADAQASIMNAETGRM--------VGIASARRANAEAGL--- 185
E+ + K AD ++ N + + + +A AN +A
Sbjct 120 TKGTTAQTIKTEADTIKTAADIGYTLENTKLNQQQQKNLTEALAKITAEIANLKASTAQT 179
Query 186 -AGTRMSNELAYPNNQPSLFKYINSGKQLVEDLFDRNYGL--PSNASPARRQRYEVFYK- 241
A T+ EL P+ P ++ I G + + + F N L P N + E YK
Sbjct 180 SAQTKNIKELQTPSPDPFWYRDIKKGVKRIHEGFKNNPSLVVPHNTA-------ETIYKS 232
Query 242 ---WCR 244
W +
Sbjct 233 GKDWAK 238
> Gokush_Human_feces_D_014_Microviridae_AG027_putative.VP2
Length=275
Score = 37.0 bits (84), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (57%), Gaps = 3/65 (5%)
Query 59 FNNTSLKNQMAYDQFKSELDYQYWSRKMSNRHTLEVGDLRQAGLNPILSANSAGSVASAI 118
F S + M ++ ++EL +Y + + + V DL+ AGLNPIL+A + G ++
Sbjct 126 FQTASAQQAMQWEAQQAELQRKYQTEMSNTSYQRAVNDLKAAGLNPILAALNQG---AST 182
Query 119 PNGAI 123
P+GA+
Sbjct 183 PSGAM 187
> Gokush_Human_feces_E_009_Microviridae_AG0283_putative.VP2
Length=294
Score = 37.0 bits (84), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/42 (48%), Positives = 26/42 (62%), Gaps = 3/42 (7%)
Query 82 WSRKMSNR-HTLEVGDLRQAGLNPILSANSAGSVASAIPNGA 122
W MSN H E+ DL+ AGLNP+LSA G +A+ +GA
Sbjct 82 WQEYMSNTAHQREIADLKAAGLNPVLSA--TGGNGAAVTSGA 121
Lambda K H a alpha
0.313 0.128 0.365 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 20911872