bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: Microviridae_proteins.fasta
           575 sequences; 147,441 total letters



Query= Contig-32_CDS_annotation_glimmer3.pl_2_1

Length=193
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  Alpavirinae_Human_feces_A_047_Microviridae_AG0315_putative.VP2      22.7    2.5
  Microvirus_gi|9625363|ref|NP_039597.1|_major_coat_protein_[Ente...  21.2    7.9


> Alpavirinae_Human_feces_A_047_Microviridae_AG0315_putative.VP2
Length=325

 Score = 22.7 bits (47),  Expect = 2.5, Method: Compositional matrix adjust.
 Identities = 11/30 (37%), Positives = 20/30 (67%), Gaps = 1/30 (3%)

Query  18   AHISISYFSLTPTNSPRILSELLIHVGNLD  47
            A+++I   S++   S RI +EL+I + +LD
Sbjct  228  ANVAIGEKSVS-NESDRIANELMIGIRDLD  256


> Microvirus_gi|9625363|ref|NP_039597.1|_major_coat_protein_[Enterobacteria_phage_alpha3]
Length=431

 Score = 21.2 bits (43),  Expect = 7.9, Method: Compositional matrix adjust.
 Identities = 9/22 (41%), Positives = 15/22 (68%), Gaps = 1/22 (5%)

Query  134  SIPAFFDPSHIAVVLYLNMLRY  155
            S+P FF P H  V++ L ++R+
Sbjct  272  SVPRFFVPEH-GVMMTLALIRF  292



Lambda      K        H        a         alpha
   0.323    0.137    0.397    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 14272689