bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-34_CDS_annotation_glimmer3.pl_2_1
Length=117
Score E
Sequences producing significant alignments: (Bits) Value
Gokush_Human_feces_A_013_Microviridae_AG009_putative.VP1 171 7e-53
Gokush_Human_gut_32_030_Microviridae_AG0188_putative.VP1 168 6e-52
Gokush_Human_gut_31_045_Microviridae_AG0117_putative.VP1 168 6e-52
Gokush_Human_gut_27_035_Microviridae_AG0167_putative.VP1 168 6e-52
Gokush_Human_feces_E_009_Microviridae_AG0285_putative.VP1 163 6e-50
Gokush_Human_feces_D_014_Microviridae_AG029_putative.VP1 153 2e-46
Gokush_Human_feces_D_045_Microviridae_AG0402_putative.VP1 147 3e-44
Gokush_Human_feces_B_068_Microviridae_AG0331_putative.VP1 142 2e-42
Gokush_Human_feces_B_029_Microviridae_AG0417_putative.VP1 130 2e-38
Gokush_Human_feces_A_019_Microviridae_AG0438_putative.VP1 127 6e-37
> Gokush_Human_feces_A_013_Microviridae_AG009_putative.VP1
Length=587
Score = 171 bits (433), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 74/111 (67%), Positives = 89/111 (80%), Gaps = 0/111 (0%)
Query 2 ESHFAQLPAAEIQRSTFDRSHGYKTSFCAGDIIPFMVDEVLPGDSFNISTSKVVRSQTML 61
ESHF+ LP +I RS FDRS KT+F GDI+PF ++EVLPGD+FN+ TSKVVR QT+L
Sbjct 6 ESHFSLLPRVDISRSRFDRSASVKTTFNTGDIVPFFLEEVLPGDTFNVKTSKVVRMQTLL 65
Query 62 TPIMDNMFLDTYYFFVPNRLVWKHWREFCGENREGAWAPTVEYTVPSIAPP 112
TP+MDN++LDTYYFFVPNRLVW+HW+EFCGEN E AW P EY +P I P
Sbjct 66 TPLMDNLYLDTYYFFVPNRLVWQHWKEFCGENTESAWIPETEYAMPQITSP 116
> Gokush_Human_gut_32_030_Microviridae_AG0188_putative.VP1
Length=562
Score = 168 bits (426), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 74/111 (67%), Positives = 89/111 (80%), Gaps = 0/111 (0%)
Query 2 ESHFAQLPAAEIQRSTFDRSHGYKTSFCAGDIIPFMVDEVLPGDSFNISTSKVVRSQTML 61
ESHF+ P +I RS FDRS KTSF AGD++PF ++EVLPGD+F++ TSKVVR QT+L
Sbjct 6 ESHFSLSPHVDISRSRFDRSASLKTSFNAGDVVPFFLEEVLPGDTFSVDTSKVVRMQTLL 65
Query 62 TPIMDNMFLDTYYFFVPNRLVWKHWREFCGENREGAWAPTVEYTVPSIAPP 112
TP+MDN++LDTYYFFVPNRLVW HW+EFCGEN E AW P EYT+P I P
Sbjct 66 TPMMDNVYLDTYYFFVPNRLVWDHWKEFCGENTESAWIPQTEYTMPQITSP 116
> Gokush_Human_gut_31_045_Microviridae_AG0117_putative.VP1
Length=562
Score = 168 bits (426), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 74/111 (67%), Positives = 89/111 (80%), Gaps = 0/111 (0%)
Query 2 ESHFAQLPAAEIQRSTFDRSHGYKTSFCAGDIIPFMVDEVLPGDSFNISTSKVVRSQTML 61
ESHF+ P +I RS FDRS KTSF AGD++PF ++EVLPGD+F++ TSKVVR QT+L
Sbjct 6 ESHFSLSPHVDISRSRFDRSASLKTSFNAGDVVPFFLEEVLPGDTFSVDTSKVVRMQTLL 65
Query 62 TPIMDNMFLDTYYFFVPNRLVWKHWREFCGENREGAWAPTVEYTVPSIAPP 112
TP+MDN++LDTYYFFVPNRLVW HW+EFCGEN E AW P EYT+P I P
Sbjct 66 TPMMDNVYLDTYYFFVPNRLVWDHWKEFCGENTESAWIPQTEYTMPQITSP 116
> Gokush_Human_gut_27_035_Microviridae_AG0167_putative.VP1
Length=562
Score = 168 bits (426), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 74/111 (67%), Positives = 89/111 (80%), Gaps = 0/111 (0%)
Query 2 ESHFAQLPAAEIQRSTFDRSHGYKTSFCAGDIIPFMVDEVLPGDSFNISTSKVVRSQTML 61
ESHF+ P +I RS FDRS KTSF AGD++PF ++EVLPGD+F++ TSKVVR QT+L
Sbjct 6 ESHFSLSPHVDISRSRFDRSASLKTSFNAGDVVPFFLEEVLPGDTFSVDTSKVVRMQTLL 65
Query 62 TPIMDNMFLDTYYFFVPNRLVWKHWREFCGENREGAWAPTVEYTVPSIAPP 112
TP+MDN++LDTYYFFVPNRLVW HW+EFCGEN E AW P EYT+P I P
Sbjct 66 TPMMDNVYLDTYYFFVPNRLVWDHWKEFCGENTESAWIPQTEYTMPQITSP 116
> Gokush_Human_feces_E_009_Microviridae_AG0285_putative.VP1
Length=559
Score = 163 bits (412), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 73/113 (65%), Positives = 90/113 (80%), Gaps = 1/113 (1%)
Query 1 VESHFAQLPA-AEIQRSTFDRSHGYKTSFCAGDIIPFMVDEVLPGDSFNISTSKVVRSQT 59
VESHFA P ++ RS FDRS KTSF GDI+PF VDEVLPGD+F++ TSKVVR QT
Sbjct 5 VESHFALNPTRLDMSRSKFDRSFSLKTSFNVGDIVPFYVDEVLPGDTFDVKTSKVVRMQT 64
Query 60 MLTPIMDNMFLDTYYFFVPNRLVWKHWREFCGENREGAWAPTVEYTVPSIAPP 112
++TPIMDN++LDTYYFFVPNRLVW+HW++F GEN E AW P+ EY++P + P
Sbjct 65 LITPIMDNIYLDTYYFFVPNRLVWEHWKQFNGENTESAWLPSTEYSIPQLTAP 117
> Gokush_Human_feces_D_014_Microviridae_AG029_putative.VP1
Length=578
Score = 153 bits (386), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 66/110 (60%), Positives = 83/110 (75%), Gaps = 0/110 (0%)
Query 3 SHFAQLPAAEIQRSTFDRSHGYKTSFCAGDIIPFMVDEVLPGDSFNISTSKVVRSQTMLT 62
SHFAQ P +IQRSTFDRS G+KT+F AG ++P VDEVLPGD+F + TS ++R T +
Sbjct 7 SHFAQAPQVDIQRSTFDRSSGHKTTFNAGKLVPIYVDEVLPGDTFEMKTSAIIRGSTPIF 66
Query 63 PIMDNMFLDTYYFFVPNRLVWKHWREFCGENREGAWAPTVEYTVPSIAPP 112
P+MDN LD Y+F+VPNRLVW HW+EF GEN W TVEY++P +APP
Sbjct 67 PVMDNANLDIYFFYVPNRLVWDHWKEFNGENTTSKWEQTVEYSIPQMAPP 116
Score = 21.2 bits (43), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 12/43 (28%), Positives = 20/43 (47%), Gaps = 11/43 (26%)
Query 1 VESHFA-QLPAAEIQRSTFDRSHGYKTSFCAGDIIPFMVDEVL 42
++SHF P A +QR + G+ IP +D+V+
Sbjct 353 IKSHFGVTSPDARLQRP----------EYLGGERIPINIDQVI 385
> Gokush_Human_feces_D_045_Microviridae_AG0402_putative.VP1
Length=541
Score = 147 bits (371), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 64/81 (79%), Positives = 72/81 (89%), Gaps = 0/81 (0%)
Query 37 MVDEVLPGDSFNISTSKVVRSQTMLTPIMDNMFLDTYYFFVPNRLVWKHWREFCGENREG 96
MVDEVLPGD+F+I+TSKVVRSQT+LTP+MDNM+LDTYYFFVPNRLVWKHWREFCGEN G
Sbjct 1 MVDEVLPGDTFDITTSKVVRSQTLLTPLMDNMYLDTYYFFVPNRLVWKHWREFCGENTTG 60
Query 97 AWAPTVEYTVPSIAPPPWRFC 117
WAPTV+YT+P I PP F
Sbjct 61 PWAPTVDYTIPKIVPPAGGFA 81
> Gokush_Human_feces_B_068_Microviridae_AG0331_putative.VP1
Length=547
Score = 142 bits (358), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 62/89 (70%), Positives = 73/89 (82%), Gaps = 0/89 (0%)
Query 24 YKTSFCAGDIIPFMVDEVLPGDSFNISTSKVVRSQTMLTPIMDNMFLDTYYFFVPNRLVW 83
YKT+F G IIPF VDEVLPGD+F+I TSKVVR QT+LTP+MD++FLDTYYFFVPNRL W
Sbjct 12 YKTTFNVGQIIPFYVDEVLPGDTFSIDTSKVVRMQTLLTPVMDDIFLDTYYFFVPNRLTW 71
Query 84 KHWREFCGENREGAWAPTVEYTVPSIAPP 112
HW++F GEN E AW P+VEY VP + P
Sbjct 72 SHWKQFMGENTESAWIPSVEYEVPQLTAP 100
> Gokush_Human_feces_B_029_Microviridae_AG0417_putative.VP1
Length=530
Score = 130 bits (327), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 57/111 (51%), Positives = 76/111 (68%), Gaps = 0/111 (0%)
Query 2 ESHFAQLPAAEIQRSTFDRSHGYKTSFCAGDIIPFMVDEVLPGDSFNISTSKVVRSQTML 61
E +FAQ P + RS F R+ KT+F GD+IP +DEVLPGD+ + + V+R T +
Sbjct 6 EYNFAQNPQVGVSRSRFQRNSDNKTTFNTGDLIPVYLDEVLPGDTHQVDVACVMRMATPI 65
Query 62 TPIMDNMFLDTYYFFVPNRLVWKHWREFCGENREGAWAPTVEYTVPSIAPP 112
P+MDN F D Y+FFVPNRL+W+HW+EF GEN+E AW P EY+VP + P
Sbjct 66 FPVMDNAFCDFYFFFVPNRLLWEHWKEFMGENKETAWTPKTEYSVPQVTAP 116
> Gokush_Human_feces_A_019_Microviridae_AG0438_putative.VP1
Length=569
Score = 127 bits (318), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 57/108 (53%), Positives = 73/108 (68%), Gaps = 0/108 (0%)
Query 2 ESHFAQLPAAEIQRSTFDRSHGYKTSFCAGDIIPFMVDEVLPGDSFNISTSKVVRSQTML 61
E+HF Q+P EI RS F R K +F AG +IPF VDEVLPGD+F+I +VR T +
Sbjct 6 EAHFNQVPNLEITRSRFKRDQDIKLTFDAGQLIPFYVDEVLPGDTFSIDNVGLVRMSTPI 65
Query 62 TPIMDNMFLDTYYFFVPNRLVWKHWREFCGENREGAWAPTVEYTVPSI 109
P+MDN +LD YYFF PNR++W+HW+EF GE + W EYTVP +
Sbjct 66 FPVMDNCYLDYYYFFCPNRILWEHWKEFMGEVTDEPWVQQTEYTVPQL 113
Lambda K H a alpha
0.324 0.138 0.463 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 6731369