bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: Microviridae_proteins.fasta
           575 sequences; 147,441 total letters





Query= Contig-35_CDS_annotation_glimmer3.pl_2_4

Length=62
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  Pichovirinae_Bourget_523_Microviridae_AG0333_putative.VP1           21.2    1.1
  Alpavirinae_Human_gut_24_085_Microviridae_AG0230_putative.VP1       20.8    1.4
  Alpavirinae_Human_gut_32_015_Microviridae_AG0213_putative.VP1       20.8    1.6
  Gokush_68_Microbialite_003_Microviridae_AG0162_putative.VP1         19.2    4.5
  unnamed protein product                                             18.5    7.2
  Gokush_Human_feces_D_014_Microviridae_AG030_putative.VP4            18.5    9.0


> Pichovirinae_Bourget_523_Microviridae_AG0333_putative.VP1
Length=518

 Score = 21.2 bits (43),  Expect = 1.1, Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 23/55 (42%), Gaps = 8/55 (15%)

Query  8    EYKFIAHITHKDMTTEDNVFIDYTASARCRAKKVAQRPNVESVYLYRIDKTEIFA  62
            EYKF+      +M T     +DY    R    K +  PN+   ++     T IFA
Sbjct  441  EYKFLNSRVAGEMRTS----LDYWHLGR----KFSAAPNLNGAFIECDPSTRIFA  487


> Alpavirinae_Human_gut_24_085_Microviridae_AG0230_putative.VP1
Length=653

 Score = 20.8 bits (42),  Expect = 1.4, Method: Composition-based stats.
 Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 0/31 (0%)

Query  2    FNMKQKEYKFIAHITHKDMTTEDNVFIDYTA  32
             N+ QK Y F+  I     T +D +   YTA
Sbjct  401  LNLAQKVYDFLNRIAVSGNTYKDWLETAYTA  431


> Alpavirinae_Human_gut_32_015_Microviridae_AG0213_putative.VP1
Length=653

 Score = 20.8 bits (42),  Expect = 1.6, Method: Composition-based stats.
 Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 0/31 (0%)

Query  2    FNMKQKEYKFIAHITHKDMTTEDNVFIDYTA  32
             N+ QK Y F+  I     T +D +   YTA
Sbjct  401  LNLAQKVYDFLNRIAVSGNTYKDWLETAYTA  431


> Gokush_68_Microbialite_003_Microviridae_AG0162_putative.VP1
Length=529

 Score = 19.2 bits (38),  Expect = 4.5, Method: Composition-based stats.
 Identities = 7/21 (33%), Positives = 13/21 (62%), Gaps = 0/21 (0%)

Query  10  KFIAHITHKDMTTEDNVFIDY  30
           K  A +  +++   DN++IDY
Sbjct  59  KSFARLATQEVPVLDNMYIDY  79


> unnamed protein product
Length=102

 Score = 18.5 bits (36),  Expect = 7.2, Method: Compositional matrix adjust.
 Identities = 12/56 (21%), Positives = 25/56 (45%), Gaps = 1/56 (2%)

Query  4   MKQKEYKFIAHITHKDMT-TEDNVFIDYTASARCRAKKVAQRPNVESVYLYRIDKT  58
           M  +  KF+  I H+++  T  + F     +  C   K +Q    +++ L  +D +
Sbjct  1   MNPELMKFVEWILHRNVHFTVTSAFRTEEQNDACNGSKTSQHLTGDAIDLKPVDSS  56


> Gokush_Human_feces_D_014_Microviridae_AG030_putative.VP4
Length=348

 Score = 18.5 bits (36),  Expect = 9.0, Method: Composition-based stats.
 Identities = 8/19 (42%), Positives = 10/19 (53%), Gaps = 0/19 (0%)

Query  29   DYTASARCRAKKVAQRPNV  47
            D+    R R K+V   PNV
Sbjct  130  DFMKRIRERWKRVHNNPNV  148



Lambda      K        H        a         alpha
   0.323    0.133    0.379    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 3725514