bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-36_CDS_annotation_glimmer3.pl_2_2
Length=71
Score E
Sequences producing significant alignments: (Bits) Value
Alpavirinae_Human_feces_C_010_Microviridae_AG0197_hypothetical.... 115 5e-34
Alpavirinae_Human_gut_21_005_Microviridae_AG012_hypothetical.pr... 104 5e-30
Alpavirinae_Human_feces_A_048_Microviridae_AG087_putative.VP1 23.1 0.30
Alpavirinae_Human_feces_B_021_Microviridae_AG0368_putative.VP1 21.9 0.78
Pichovirinae_Pavin_279_Microviridae_AG0271_putative.VP1 21.2 1.4
Alpavirinae_Human_feces_A_021_Microviridae_AG079_hypothetical.p... 20.8 1.7
Alpavirinae_Human_feces_A_034_Microviridae_AG0102_putative.VP4 19.2 7.2
Gokush_Human_feces_E_017_Microviridae_AG0128_putative.VP2 19.2 7.2
Gokush_Human_feces_A_020_Microviridae_AG0263_putative.VP2 19.2 7.5
> Alpavirinae_Human_feces_C_010_Microviridae_AG0197_hypothetical.protein.BACPLE
Length=382
Score = 115 bits (288), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 53/71 (75%), Positives = 59/71 (83%), Gaps = 0/71 (0%)
Query 1 LYKQTGIDISNQHAKFNFDQAKNWDSTERFTNVATTWINSISCAVGQFTGSASDLKQAGF 60
LYKQTGIDISNQHAKFNFDQAKNWDSTERFTNVATTWINS+S AV QF G+ + L++ GF
Sbjct 312 LYKQTGIDISNQHAKFNFDQAKNWDSTERFTNVATTWINSVSFAVSQFAGATTSLQKGGF 371
Query 61 LSPPRNKAGFR 71
L + GFR
Sbjct 372 LGKSMSPIGFR 382
> Alpavirinae_Human_gut_21_005_Microviridae_AG012_hypothetical.protein.BACPLE
Length=383
Score = 104 bits (259), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 48/71 (68%), Positives = 54/71 (76%), Gaps = 0/71 (0%)
Query 1 LYKQTGIDISNQHAKFNFDQAKNWDSTERFTNVATTWINSISCAVGQFTGSASDLKQAGF 60
L+KQTGIDISNQ A FNF QA+ WDSTERFTNVATTWINS+S A GQF G+ + L + GF
Sbjct 313 LFKQTGIDISNQQAIFNFQQAQTWDSTERFTNVATTWINSLSFAAGQFAGATTSLSKGGF 372
Query 61 LSPPRNKAGFR 71
L P GFR
Sbjct 373 LGKPMTPIGFR 383
> Alpavirinae_Human_feces_A_048_Microviridae_AG087_putative.VP1
Length=650
Score = 23.1 bits (48), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 14/43 (33%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query 16 FNFDQAKNWDSTERFTNVA-TTWINSISCAVGQFTGSASDLKQ 57
+N D +NW +TE VA I+++ G+ T A +L Q
Sbjct 358 YNSDLLQNWINTEWIDGVAGINEISAVDVTDGKLTMDALNLSQ 400
> Alpavirinae_Human_feces_B_021_Microviridae_AG0368_putative.VP1
Length=649
Score = 21.9 bits (45), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 23/48 (48%), Gaps = 5/48 (10%)
Query 16 FNFDQAKNWDSTERFTNVATTWINSISCA---VGQFTGSASDLKQAGF 60
+N D +NW +TE V T IN IS G+ T A +L Q +
Sbjct 357 YNSDLLQNWINTEWIDGV--TGINEISAVDVTDGKLTMDALNLAQKVY 402
> Pichovirinae_Pavin_279_Microviridae_AG0271_putative.VP1
Length=503
Score = 21.2 bits (43), Expect = 1.4, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 5/43 (12%)
Query 23 NWDSTE--RFTNVATTWINSISCAVGQFTGSASDLKQAGFLSP 63
NW+ + +F N A T IN++ G G+ + ++ +G SP
Sbjct 209 NWNPSAIPKFVNAAGTSINNLDDVQG---GTPNRIRTSGGQSP 248
> Alpavirinae_Human_feces_A_021_Microviridae_AG079_hypothetical.protein.BACEGG.02723
Length=397
Score = 20.8 bits (42), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 7/11 (64%), Positives = 10/11 (91%), Gaps = 0/11 (0%)
Query 38 INSISCAVGQF 48
+NS+S A+GQF
Sbjct 98 LNSVSNAIGQF 108
> Alpavirinae_Human_feces_A_034_Microviridae_AG0102_putative.VP4
Length=539
Score = 19.2 bits (38), Expect = 7.2, Method: Composition-based stats.
Identities = 7/21 (33%), Positives = 11/21 (52%), Gaps = 0/21 (0%)
Query 8 DISNQHAKFNFDQAKNWDSTE 28
+IS F+FD +W S +
Sbjct 106 NISFNDKTFDFDTQLSWSSAQ 126
> Gokush_Human_feces_E_017_Microviridae_AG0128_putative.VP2
Length=300
Score = 19.2 bits (38), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 12/22 (55%), Gaps = 3/22 (14%)
Query 3 KQTGIDISNQHAKFNFDQAKNW 24
+Q D SN KFNF Q + W
Sbjct 36 QQQQFDASN---KFNFSQNQGW 54
> Gokush_Human_feces_A_020_Microviridae_AG0263_putative.VP2
Length=300
Score = 19.2 bits (38), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 12/22 (55%), Gaps = 3/22 (14%)
Query 3 KQTGIDISNQHAKFNFDQAKNW 24
+Q D SN KFNF Q + W
Sbjct 36 QQQQFDASN---KFNFSQNQGW 54
Lambda K H a alpha
0.317 0.129 0.396 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 3715980