bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-6_CDS_annotation_glimmer3.pl_2_1
Length=59
Score E
Sequences producing significant alignments: (Bits) Value
Alpavirinae_Human_gut_21_005_Microviridae_AG016_putative.VP1 118 2e-34
Alpavirinae_Human_feces_C_010_Microviridae_AG0199_putative.VP1 114 8e-33
Alpavirinae_Human_feces_B_007_Microviridae_AG068_putative.VP1 74.7 8e-19
Pichovirinae_JCVI_003_Microviridae_AG0344_putative.VP1 35.0 2e-05
Pichovirinae_Pavin_279_Microviridae_AG0271_putative.VP1 33.5 6e-05
Pichovirinae_59_Coral_002_Microviridae_AG0339_putative.VP1 27.7 0.005
Pichovirinae_Bourget_523_Microviridae_AG0333_putative.VP1 26.6 0.012
Alpavirinae_Human_feces_B_020_Microviridae_AG0351_putative.VP1 25.0 0.043
Alpavirinae_CF7ML_001_Microviridae_AG0309_putative.VP1 24.3 0.068
Pichovirinae_66_Microbialites_001_Microviridae_AG0132_putative.VP1 22.7 0.21
> Alpavirinae_Human_gut_21_005_Microviridae_AG016_putative.VP1
Length=742
Score = 118 bits (296), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 55/59 (93%), Positives = 58/59 (98%), Gaps = 0/59 (0%)
Query 1 MHRSFTGLPQLGQQFLLVDPNAVNQVFSVTEYTDKIFGYVKFNATARLPISRVAIPRLD 59
MHR+F+GLPQLGQQFLLVDP+ VNQVFSVTEYTDKIFGYVKFNATARLPISRVAIPRLD
Sbjct 684 MHRTFSGLPQLGQQFLLVDPDTVNQVFSVTEYTDKIFGYVKFNATARLPISRVAIPRLD 742
> Alpavirinae_Human_feces_C_010_Microviridae_AG0199_putative.VP1
Length=731
Score = 114 bits (285), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 54/59 (92%), Positives = 56/59 (95%), Gaps = 0/59 (0%)
Query 1 MHRSFTGLPQLGQQFLLVDPNAVNQVFSVTEYTDKIFGYVKFNATARLPISRVAIPRLD 59
M R F+GLPQLGQQFLLVDP+ VNQVFSVTEYTDKIFGYVKFNATARLPISRVAIPRLD
Sbjct 673 MSRVFSGLPQLGQQFLLVDPDTVNQVFSVTEYTDKIFGYVKFNATARLPISRVAIPRLD 731
> Alpavirinae_Human_feces_B_007_Microviridae_AG068_putative.VP1
Length=780
Score = 74.7 bits (182), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 33/59 (56%), Positives = 44/59 (75%), Gaps = 0/59 (0%)
Query 1 MHRSFTGLPQLGQQFLLVDPNAVNQVFSVTEYTDKIFGYVKFNATARLPISRVAIPRLD 59
M RSF P+LG+ F ++ P +VN VFSVTE +DKI G + F+ TA+LPISRV +PRL+
Sbjct 722 MFRSFENAPELGKSFTVMQPGSVNNVFSVTEVSDKILGQIHFDCTAQLPISRVVVPRLE 780
> Pichovirinae_JCVI_003_Microviridae_AG0344_putative.VP1
Length=505
Score = 35.0 bits (79), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query 3 RSFTGLPQLGQQFLLVDPNAVNQVFSVTEYTDKIFGYV--KFNATARLPI 50
R F+ LP L Q F+ VD + +++F+VT+ D ++ +V K A ++P+
Sbjct 450 RIFSSLPTLSQDFIEVDADDFDRIFAVTDGDDNLYMHVLNKVKARRQMPV 499
Score = 21.2 bits (43), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 13/45 (29%), Positives = 21/45 (47%), Gaps = 5/45 (11%)
Query 10 QLGQQFLLVDPNAVNQVFSVTEYTDKIFGYVKFNATARLPISRVA 54
+G+Q P N++++ D+ FGY A + SRVA
Sbjct 397 HIGEQ-----PIVNNEIYAYDPTGDETFGYTPRYAEYKYMPSRVA 436
> Pichovirinae_Pavin_279_Microviridae_AG0271_putative.VP1
Length=503
Score = 33.5 bits (75), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/59 (34%), Positives = 29/59 (49%), Gaps = 1/59 (2%)
Query 1 MHRSFTGLPQLGQQFLLVDPNAVNQVFSVTE-YTDKIFGYVKFNATARLPISRVAIPRL 58
+ R F +P L Q F+ V P ++F+ E Y D I+ +V TAR P+ P L
Sbjct 445 LGRIFANIPTLSQSFIEVSPANQTRIFANQEDYDDNIYIHVLNKMTARRPMPVFGTPML 503
> Pichovirinae_59_Coral_002_Microviridae_AG0339_putative.VP1
Length=522
Score = 27.7 bits (60), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 27/51 (53%), Gaps = 2/51 (4%)
Query 1 MHRSFTGLPQLGQQFLLVDPNAVNQVFSVTEYTDKIFGYV--KFNATARLP 49
M R F P L Q F+ + + V +VF+VT + ++ Y+ + AT +P
Sbjct 465 MGRIFGSKPTLNQDFIECNADDVERVFAVTAGQEHLYVYLHNEVKATRLMP 515
> Pichovirinae_Bourget_523_Microviridae_AG0333_putative.VP1
Length=518
Score = 26.6 bits (57), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query 1 MHRSFTGLPQLGQQFLLVDPNAVNQVFSVTE-YTDKIFGYVKFNATARLPISRVAIPRL 58
+ R F+ P L F+ DP+ ++F+V + D I+G++ N A + + P
Sbjct 462 LGRKFSAAPNLNGAFIECDPST--RIFAVEDAEVDNIYGHIFNNIKAIRKMPKYGTPNF 518
> Alpavirinae_Human_feces_B_020_Microviridae_AG0351_putative.VP1
Length=651
Score = 25.0 bits (53), Expect = 0.043, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 1/51 (2%)
Query 9 PQLGQQFLLVDPNAVNQVFSVTEYTDKIFGY-VKFNATARLPISRVAIPRL 58
P++ +DP N +F+ T F +KF+ TAR +S IP L
Sbjct 601 PRIADLTTYIDPIKYNYIFADTSIDAMNFWVQIKFDITARRLMSAKQIPNL 651
> Alpavirinae_CF7ML_001_Microviridae_AG0309_putative.VP1
Length=692
Score = 24.3 bits (51), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 7/60 (12%)
Query 3 RSFTGLPQLGQQFLLVDPNAVNQVFSV----TEYTDKIFGYVKFNATARLPISRVAIPRL 58
+ + G+P FL VDP N+V V TE TD +F+ +S +PR+
Sbjct 636 KEYKGVPT---NFLFVDPAVTNEVVEVNYDGTEKTDPFRISSRFSVQYISDMSVSGMPRV 692
> Pichovirinae_66_Microbialites_001_Microviridae_AG0132_putative.VP1
Length=518
Score = 22.7 bits (47), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 18/30 (60%), Gaps = 0/30 (0%)
Query 25 QVFSVTEYTDKIFGYVKFNATARLPISRVA 54
++++ + D+IFGY+ A + SRVA
Sbjct 421 ELYANSPAPDEIFGYIPRYAEMKFKNSRVA 450
Lambda K H a alpha
0.326 0.140 0.411 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 3629248