bitscore colors: <40, 40-50 , 50-80, 80-200, >200




           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: Microviridae_proteins.fasta
           575 sequences; 147,441 total letters





Query= Contig-9_CDS_annotation_glimmer3.pl_2_3

Length=561
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  Alpavirinae_Human_feces_C_043_Microviridae_AG0321_putative.VP4        412   7e-139
  Alpavirinae_Human_feces_D_008_Microviridae_AG0100_putative.VP4        221   7e-66
  Alpavirinae_Human_feces_D_031_Microviridae_AG0423_putative.VP4        215   9e-64
  Alpavirinae_Human_gut_33_005_Microviridae_AG0180_putative.VP4         159   5e-44
  Alpavirinae_Human_feces_A_034_Microviridae_AG0102_putative.VP4        155   2e-42
  Alpavirinae_Human_feces_B_039_Microviridae_AG093_putative.VP4         150   3e-41
  Alpavirinae_Human_feces_D_015_Microviridae_AG020_putative.VP4         149   2e-40
  Alpavirinae_Human_gut_22_017_Microviridae_AG0393_putative.VP4         146   1e-39
  Alpavirinae_Human_feces_A_021_Microviridae_AG075_putative.VP4         144   6e-39
  Alpavirinae_Human_gut_33_017_Microviridae_AG0152_putative.VP4         138   8e-37


> Alpavirinae_Human_feces_C_043_Microviridae_AG0321_putative.VP4
Length=546

 Score =   412 bits (1060),  Expect = 7e-139, Method: Compositional matrix adjust.
 Identities = 240/563 (43%), Positives = 330/563 (59%), Gaps = 54/563 (10%)

Query  8    KYLAKRCYHGKNVINPYTGQVMYQPCGECPACLTRKASIRSMRVSLQKSLSKYTYFINPS  67
            K L+K C HGKNV N YTGQ+MYQ CG+C ACL+R AS RS++V +Q SLSKY  F+  +
Sbjct  9    KELSKTCLHGKNVYNKYTGQMMYQSCGKCEACLSRLASARSIKVGVQASLSKYVMFVTLT  68

Query  68   YDQKYVPKCQIFKVHPDDPDSTLYELVVKPRRRGDykmvqkvyskkykkvikkEVDAPLS  127
            YD  +VPKC+I+    ++     Y LVVKPR +  +        K+            LS
Sbjct  69   YDTYHVPKCKIYSNGDNN-----YVLVVKPRVKDYFYYETSDGQKRL---------KGLS  114

Query  128  YTDDFSYYFNASEEYIRDFREQATLNVNGKYPHLQDYYGYISRKDGQLFVKRLRKHIFKF  187
            Y DDF   F A ++YI +F++QA L+V G YPHL+D YGY+SRKD QLF+KR+RK I  +
Sbjct  115  YDDDFRVEFKADKDYIENFKKQANLDVKGCYPHLKDMYGYLSRKDCQLFMKRVRKQIRNY  174

Query  188  AGKYEKVHIYLVSEYGPVHFRPHFHILLFTDSDRVAKNIGRIVNSSWKFGRCDWSASRGD  247
                EK+H Y+V EY P HFRPHFHIL F +S+ ++++ G IV S WKFG  DWS SRGD
Sbjct  175  TD--EKIHTYIVGEYSPKHFRPHFHILFFFNSNELSQSFGSIVRSCWKFGLVDWSQSRGD  232

Query  248  AESYVAGYVNSFSRLPYHLKQDDRVKPYSRFSNGFATSCFFDAKEAVRDSISRPIEETPL  307
            AESYVAGYVNSF+RLPYHL    ++ P+ RFSN F+ SCF DAK+ +RDS     ++TP+
Sbjct  233  AESYVAGYVNSFARLPYHLGSSPKIAPFGRFSNHFSESCFDDAKQTLRDSFFG--QKTPV  290

Query  308  -SPFLNGVPSLINGKLLAIRPPRSVVDSCFLRYACNGRLSSHELYWLVRSVSTTLSRSFQ  366
             +PFLNGV +L+NGKLL  RP RS VDSCF R A +GRLSSHEL  L+R+V   + +  +
Sbjct  291  FAPFLNGVTNLVNGKLLLTRPSRSCVDSCFFRKARDGRLSSHELLHLIRAVCHVVEQGKR  350

Query  367  TVRRDNPDATLMDVCRLHLRSIYSMSSRSVEDFLSIENQLYTCYYYAR--LESPTTDVRS  424
               RD  + T ++  R  +++  S   +  E  LS+ ++L T  YY+R  L     D ++
Sbjct  351  FFARDGLNYTFLNHARFIVKACKSFRYQKREKLLSLPSRLVTLLYYSRVDLTKDIQDYKN  410

Query  425  DDLFDSDCMRLYRLFSCVGKFISFWDITPSSSYEYIYRTVDLSKWYYSRLSYHMLRSQYT  484
             D+ ++    +YR+     +F+ FW I     +E I R +D+ + YY  L Y  LR ++ 
Sbjct  411  PDVDEAMAQSIYRVLLYTMRFVRFWKIDKMPYHEGI-RLLDMCREYYRLLDYQYLRQRFQ  469

Query  485  dlvglvdldeelvdFLIAPVTEDT------PSSNGVSALEHHPPFESLVKSHPILSLAQA  538
                            +    ED       P+ N    L       ++V      SL + 
Sbjct  470  ---------------FLEQCEEDLLDFYLHPTENFADYLP-----RTIVTGINQYSLERY  509

Query  539  KAKTDCDNRVKHREINERNLKYV  561
            +        +KHREIN+ NL+YV
Sbjct  510  QKA------IKHREINDLNLQYV  526


> Alpavirinae_Human_feces_D_008_Microviridae_AG0100_putative.VP4
Length=532

 Score =   221 bits (562),  Expect = 7e-66, Method: Compositional matrix adjust.
 Identities = 132/367 (36%), Positives = 202/367 (55%), Gaps = 18/367 (5%)

Query  1    MDKVGTIKYLAKRCYHGKNVINPYTGQVMYQPCGECPACLTRKASIRSMRVSLQKSLSKY  60
            M++   I+ +   C H     NPYTG+++  PCG CPAC   K+ +   +V  Q  +S++
Sbjct  1    MNQQEFIQKVFSMCQHQVQTKNPYTGELIMVPCGTCPACRFNKSILSQNKVHAQSLISRH  60

Query  61   TYFINPSYDQKYVPKCQIFKVHPDDPDSTLYELVVKPRRRGDykmvqkvyskkykkvikk  120
             YF+  +Y Q+Y+P    ++   +  D+    +    R R            K+K  I+ 
Sbjct  61   VYFVTLTYAQRYIP---YYEYEIEALDADFLAITAHCRDRNPMYRTYTYRGTKHKLRIRG  117

Query  121  EVDAPLSYTDDFSYYFNASEEYIRDFREQATLNVNGKYPHLQDYYGYISRKDGQLFVKRL  180
                 +      S+ F+ + +Y   + ++A L+ +GKYP L D   Y+   D  L++KR+
Sbjct  118  LASPKVK-----SFSFSVNRDYWTSYAQKANLSFDGKYPALSDRIPYLLHDDVSLYMKRV  172

Query  181  RKHIFKFAGKYEKVHIYLVSEYGPVHFRPHFHILLFTDSDRVAKNIGRIVNSSWKFGRCD  240
            RK+I K  G  E +H Y+V EYGPV FRPHFH+LLF +SD +A++I RI  S W+FGR D
Sbjct  173  RKYISKL-GINETIHTYVVGEYGPVTFRPHFHLLLFFNSDELAQSIVRIARSCWRFGRVD  231

Query  241  WSASRGDAESYVAGYVNSFSRLPYHLKQDDRVKPYSRFSNGFATSCFFDAKEAVRDSISR  300
             SASRGDAE YV+ Y+NSFS +P H+++   ++P++RFSN F  S F   + +++ + S 
Sbjct  232  CSASRGDAEDYVSSYLNSFSSIPLHIQEIRAIRPFARFSNKFGFSFF---ESSIKKAQSG  288

Query  301  PIEETPLSPFLNGVPSLINGKLLAIRPPRSVVDSCFLRYACNGRLSSHELYWLVRSVSTT  360
              +E      LNG     NG    I P R+++D+CF R A   R   HEL  ++R V   
Sbjct  289  DFDE-----ILNGKSLPYNGFNTTIFPWRAIIDTCFYRPALRRRSDIHELTEILRYVRNF  343

Query  361  LSR-SFQ  366
              R +FQ
Sbjct  344  KQRPAFQ  350


 Score = 23.1 bits (48),  Expect = 6.3, Method: Compositional matrix adjust.
 Identities = 9/22 (41%), Positives = 14/22 (64%), Gaps = 0/22 (0%)

Query  534  SLAQAKAKTDCDNRVKHREINE  555
            +L + K   +   R+KHREIN+
Sbjct  495  NLCRDKLHNEIRKRIKHREIND  516


> Alpavirinae_Human_feces_D_031_Microviridae_AG0423_putative.VP4
Length=532

 Score =   215 bits (547),  Expect = 9e-64, Method: Compositional matrix adjust.
 Identities = 128/355 (36%), Positives = 196/355 (55%), Gaps = 17/355 (5%)

Query  1    MDKVGTIKYLAKRCYHGKNVINPYTGQVMYQPCGECPACLTRKASIRSMRVSLQKSLSKY  60
            M++   I+ +   C H     NPYTG+++  PCG CPAC   K+ +   +V  Q  +S++
Sbjct  1    MNQQEFIQKVFSMCQHQVQTKNPYTGELIMVPCGTCPACRFNKSILSQNKVHAQSLVSRH  60

Query  61   TYFINPSYDQKYVPKCQIFKVHPDDPDSTLYELVVKPRRRGDykmvqkvyskkykkvikk  120
             YF+  +Y Q+Y+P    ++   +  D+    +      R            K+K  I+ 
Sbjct  61   VYFVTLTYAQRYIP---YYEYEIEALDADFLAITAHCCDRNPMYRTYTYRGTKHKLRIRG  117

Query  121  EVDAPLSYTDDFSYYFNASEEYIRDFREQATLNVNGKYPHLQDYYGYISRKDGQLFVKRL  180
                 L+  +  S+ F+ + +Y   + ++A L+ NGKYP L     Y+   D  L++KR+
Sbjct  118  -----LASPNVKSFSFSVNRDYWTSYAQKANLSFNGKYPALSGRIPYLLHGDVSLYMKRV  172

Query  181  RKHIFKFAGKYEKVHIYLVSEYGPVHFRPHFHILLFTDSDRVAKNIGRIVNSSWKFGRCD  240
            RK+I K  G  E +H Y+V EYGP  FRPHFH+LLF DSD +A+NI RI +S W+FGR D
Sbjct  173  RKYISKL-GINETIHTYIVGEYGPSSFRPHFHLLLFFDSDELAQNIIRIASSCWRFGRVD  231

Query  241  WSASRGDAESYVAGYVNSFSRLPYHLKQDDRVKPYSRFSNGFATSCFFDAKEAVRDSISR  300
             SASRGDAE YV+ Y+NSFS +P H+++   ++P++RFSN F  S F   + +++ + S 
Sbjct  232  CSASRGDAEDYVSSYLNSFSSIPLHIQEIRAIRPFARFSNKFGYSFF---ESSIKKAQSG  288

Query  301  PIEETPLSPFLNGVPSLINGKLLAIRPPRSVVDSCFLRYACNGRLSSHELYWLVR  355
              +E      LNG     NG    I P R+++D+CF R A       HEL  ++R
Sbjct  289  NFDEI-----LNGKSLPYNGFDTTIFPWRAIIDTCFYRPALRRHSDIHELTEILR  338


 Score = 25.0 bits (53),  Expect = 2.0, Method: Compositional matrix adjust.
 Identities = 10/22 (45%), Positives = 15/22 (68%), Gaps = 0/22 (0%)

Query  534  SLAQAKAKTDCDNRVKHREINE  555
            SL + K  ++   R+KHREIN+
Sbjct  495  SLCRDKLHSEIRKRIKHREIND  516


> Alpavirinae_Human_gut_33_005_Microviridae_AG0180_putative.VP4
Length=536

 Score =   159 bits (402),  Expect = 5e-44, Method: Compositional matrix adjust.
 Identities = 106/330 (32%), Positives = 168/330 (51%), Gaps = 38/330 (12%)

Query  14   CYHGKNVINPYTGQVMYQPCGECPACLTRKASIRSMRVSLQKSLSKYTYFINPSYDQKYV  73
            C H   + N YTG  +Y  CG C  CL+ KA  + +R ++Q + S+  +F+  +Y  +++
Sbjct  12   CLHPVIIKNKYTGDPIYVECGTCEVCLSNKAIQKELRCNIQLASSRCCFFVTLTYATEHI  71

Query  74   PKCQIFKVHPDDPDSTLYELVVKPRRRGDykmvqkvyskkykkvikkEVDAPLSYTDD-F  132
            P  + +K++    DS  Y L   PR               Y  V  +  +  +S+ D+ F
Sbjct  72   PVARFYKLN----DS--YHLCCVPRDH------------VYTYVTSQGYNRKMSFCDEEF  113

Query  133  SYYFNASEEYIRDFREQATLNVNG--------KYPHLQDYYGYISRKDGQLFVKRLRKHI  184
             Y  N  +E +    ++  L+           KYP++ D   Y++ +D QLF KR+ + I
Sbjct  114  DYPTNLRDEAVTALLDKTHLDRTVYPDGRSVVKYPNMGDLLPYLNYRDVQLFHKRINQQI  173

Query  185  FKFAGKYEKVHIYLVSEYGPVHFRPHFHILLFTDSDRVAKNIGRIVNSSWKFGRCDWSAS  244
             K+    EK++ Y V EYGP  FRPHFH+L F DS+R+A+  G++V+ +W+FG  D    
Sbjct  174  KKYTD--EKIYSYTVGEYGPKTFRPHFHLLFFFDSERLAQVFGQLVDKAWRFGNSDTQRV  231

Query  245  RGDAESYVAGYVNSFSRLPYHLKQDDRVKPYSRFSNGFATSCFFDAKEAVRDSISRPIE-  303
               A SYVAGY+NS   LP   + + ++ P+ RFS  FA   F +A         +P E 
Sbjct  232  WSSASSYVAGYLNSSHCLPEFYRCNRKIAPFGRFSQYFAERPFIEA--------FKPEEN  283

Query  304  ETPLSPFLNGVPSLINGKLLAIRPPRSVVD  333
            E     F+NG+   + GK    RP RS+++
Sbjct  284  EKVFDKFVNGIYLSLGGKPTLCRPKRSLIN  313


> Alpavirinae_Human_feces_A_034_Microviridae_AG0102_putative.VP4
Length=539

 Score =   155 bits (391),  Expect = 2e-42, Method: Compositional matrix adjust.
 Identities = 151/564 (27%), Positives = 246/564 (44%), Gaps = 68/564 (12%)

Query  14   CYHGKNVINPYTGQVMYQPCGECPACLTRKASIRSMRVSLQKSLSKYTYFINPSYDQKYV  73
            C H + + N YTG  +Y PCG C  C+  KA    ++ ++Q + S+Y  FI  +Y  +Y+
Sbjct  12   CLHPRVIKNKYTGDPIYVPCGTCEFCVHNKAIKAELKCNVQLASSRYCEFITLTYSTEYL  71

Query  74   PKCQIFKVHPDDPDSTLYELVVKPRRRGDykmvqkvyskkykkvikkEVDAPLSYTDD-F  132
            P  + ++     P             RG+ +         Y     +     +S+ D  F
Sbjct  72   PVGKFYQ----GP-------------RGEVRFCSLPRDFVYSYKTVQGYTRNISFNDKTF  114

Query  133  SYYFNASEEYIRDFREQATLNVNG--------KYPHLQDYYGYISRKDGQLFVKRLRKHI  184
             +    S    +  +++A L+             P+++   GY++  D QLF KRL ++I
Sbjct  115  DFDTQLSWSSAQLLQKKAHLHYTSFPDGRCIYNRPYMEGLVGYLNYHDIQLFFKRLNQNI  174

Query  185  FKFAGKYEKVHIYLVSEYGPVHFRPHFHILLFTDSDRVAKNIGRIVNSSWKFGRCDWSAS  244
             +     EK++ Y+V EYGP  FRPHFHILLF DS ++ ++I + V+ SW+FG  D    
Sbjct  175  RRITN--EKIYYYVVGEYGPTTFRPHFHILLFHDSRKLRESIRQFVSKSWRFGDSDTQPV  232

Query  245  RGDAESYVAGYVNSFSRLPYHLKQDDRVKPYSRFSNGFATSCFFDAKEAVRDSISRPIE-  303
               A  YVAGYVNS + LP   K    +KP+ RFS  FA S F        + + +P E 
Sbjct  233  WSSASCYVAGYVNSTACLPDFFKNSRHIKPFGRFSVNFAESAF--------NEVFKPEEN  284

Query  304  ETPLSPFLNGVPSLINGKLLAIRPPRSVVDSCFLRYACNGRLSSHELYWLVRSVSTTLSR  363
            E   S F +G    +NGK   +RP RS ++  + R       S H        +++ +SR
Sbjct  285  EEIFSLFYDGRVLNLNGKPTIVRPKRSHINRLYPRLD----KSKHATVVDDIRIASVVSR  340

Query  364  SFQTVRRDNPDATLMDVCRLHL-RSIYSMSSRSVEDFLSIE---NQLYTCYYYARLESPT  419
              Q V +      + +V    L + +Y +  R +E   S++   ++L   Y   RL   +
Sbjct  341  LPQVVAK---FGFIDEVSDFELSKRVYYLIRRHLEVDCSLDYASDELRVIYNACRL---S  394

Query  420  TDVRSDDLFDSDCMRLYRLFSCVGKFISFWDITPSSSYEY---IYRTVDLSKWYY---SR  473
              +   D  +S C  +YRL       +  W   P  S  +   ++R V     +Y   SR
Sbjct  395  LYINFSD--ESGCAAIYRLLLQYRNLVKNWITAPVGSVAFTGQLHRAVRAIHSFYDYCSR  452

Query  474  LSYHMLRSQYTdlvglvdldeelvdFLIAPVTEDTPSSNGVSALEHHPPFESLVKSHPIL  533
             S H    +         +   L  +   P+T+       V  +     F  +V    +L
Sbjct  453  RSLHDQLVKVEKWSNDSYVRANLSIYYFYPLTD-------VDIM--MKSFSEIVFDSQVL  503

Query  534  SLAQAKAKTDCDNRVKHREINERN  557
              + A    D   R+KH+ +N++N
Sbjct  504  RASYADYAADNRERIKHKALNDKN  527


> Alpavirinae_Human_feces_B_039_Microviridae_AG093_putative.VP4
Length=559

 Score =   150 bits (380),  Expect = 3e-41, Method: Compositional matrix adjust.
 Identities = 127/461 (28%), Positives = 207/461 (45%), Gaps = 43/461 (9%)

Query  14   CYHGKNVINPYTGQVMYQPCGECPACLTRKASIRSMRVSLQKSLSKYTYFINPSYDQKYV  73
            C H   + N Y G  +   CG+C  C+ ++A   SMRV    S  KY+YF+  +YD +++
Sbjct  14   CQHRSFITNRYNGARITVDCGQCDYCIHKRAQKASMRVKTAGSAFKYSYFVTLTYDNEHI  73

Query  74   P--KCQIFKVHPDD----------PDSTLYELVVKPRRRGDykmvqkvyskkykkvikkE  121
            P   C++     +D           D     + V   R  D  M++ ++ +        +
Sbjct  74   PLMNCKVLHSEYEDVVGISGDIHFGDEYHKYIPVSEYRCDDNSMLRHIFFE--------Q  125

Query  122  VDAPLSYTDDFSYYFNASEEY------IRDFREQATLNVNGKYPHLQDY-----YGYISR  170
            V   + +  +   Y    + +      IR F  +        YP  + Y       +++ 
Sbjct  126  VQGTVPFDREIKEYVPVKDNWFLSMAAIRSFIYKTQSVDKTDYPASEQYGRDNLIPFLNY  185

Query  171  KDGQLFVKRLRKHIFKFAGKYEKVHIYLVSEYGPVHFRPHFHILLFTDSDRVAKNIGRIV  230
             D Q ++KRLRK++F+  GKYE  H Y V EYGPVHFRPH+H+LLFT+SD+V++ +    
Sbjct  186  VDVQNYIKRLRKYLFQQLGKYETFHFYAVGEYGPVHFRPHYHLLLFTNSDKVSEVLRYCH  245

Query  231  NSSWKFGRCDWSASRGDAESYVAGYVNSFSRLPYHLKQDDRVKPYSRFSNGFATSCFFDA  290
            + SWK GR D+  S G A SYVA YVNS    P   +     +P SR S GF    F   
Sbjct  246  DKSWKLGRSDFQRSAGGAGSYVASYVNSLCSAPLLYRSCRAFRPKSRASVGF----FEKG  301

Query  291  KEAVRDSISRPIEETPLSPFLNGVPSLINGKLLAIRPPRSVVDSCFLRYACNGRLSSHEL  350
             + V D       E  +   +NG     NG  +   PP S + +   R++         +
Sbjct  302  CDFVEDDDPYAQIEQKIDSVVNGRVYNFNGVSVRSTPPLSYIRTLLPRFSSARNDDGIAI  361

Query  351  YWLVRSVSTTLSRSFQTVRRDNPDATLMDVCRLHLRSIYSMSSRSVEDFLSIENQLYTCY  410
              ++ +V +T  R  +    D    +++ + R + + +       V   L+ +++L    
Sbjct  362  ARILYAVHSTPKRIARFGFADYKQDSILSLVRTYYQYL------KVNPILTDDDKL--IL  413

Query  411  YYARLESPTTDVRSDDLFDSDCMRLYRLFSCVGKFISFWDI  451
            + +R  +   +  SD   +S   +LYRLF  V KF   W +
Sbjct  414  HASRCLTRFVNCSSDVDIESYINKLYRLFLYVYKFFRNWHL  454


> Alpavirinae_Human_feces_D_015_Microviridae_AG020_putative.VP4
Length=563

 Score =   149 bits (375),  Expect = 2e-40, Method: Compositional matrix adjust.
 Identities = 82/227 (36%), Positives = 125/227 (55%), Gaps = 12/227 (5%)

Query  141  EYIRDFREQATLNVNGKYPHLQDYYGYISRKDGQLFVKRLRKHIFKFAGKYEKVHIYLVS  200
            E     +++   + NG +P  +    Y++ +D QLF KRLRK++ K  GKYEK+H Y+VS
Sbjct  183  EIAESLKKKNNTDANGAFPQFKGLLKYVNIRDYQLFAKRLRKYLSKKVGKYEKIHSYVVS  242

Query  201  EYGPVHFRPHFHILLFTDSDRVAKNIGRIVNSSWKFGRCDWSASRGDAESYVAGYVNSFS  260
            EY P  FRPHFHIL F DSD +AKN  + V  SW+ GR D   +R  A SYV+ Y+NS  
Sbjct  243  EYSPKTFRPHFHILFFFDSDEIAKNFRQAVYQSWRLGRVDTQLAREQANSYVSNYLNSVV  302

Query  261  RLPYHLKQDDRVKPYSRFSNGFATSCFFDAKEAVRDSISRPIEETPLSPFLNGVPSLING  320
             +P+  K    ++P SRFSN F    F + KE +R +      +   +   +G+  + N 
Sbjct  303  SIPFVYKAKKSIRPRSRFSNLFG---FEEVKEGIRKA------QDKRAALFDGLSYISNQ  353

Query  321  KLLAIRPPRSVVDSCFLRYA-CNGRL--SSHELYWLVRSVSTTLSRS  364
            K +   P  S++D  F R+   +G     S ++Y +V+ +    +R+
Sbjct  354  KFVRYVPSGSLIDRLFPRFTYYDGSFLRRSSQIYGVVQQILRLFARN  400


 Score = 57.0 bits (136),  Expect = 2e-10, Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 44/82 (54%), Gaps = 2/82 (2%)

Query  1   MDKVGTIKYLAKRCYHGKNVINPYTGQVMYQPCGECPACLTRKASIRSMRVSLQKSLSKY  60
           MDK    KY   RC H + + N YTG  +   CG+CP CL +KA   + +    K   +Y
Sbjct  1   MDK-KVFKYF-NRCEHPQVIQNKYTGDYVKVDCGQCPYCLIKKADRSTQKCDFVKYNHRY  58

Query  61  TYFINPSYDQKYVPKCQIFKVH  82
            YF+  +Y+ +YVPK  + ++ 
Sbjct  59  CYFVTLTYNTQYVPKMSLTQIE  80


> Alpavirinae_Human_gut_22_017_Microviridae_AG0393_putative.VP4
Length=562

 Score =   146 bits (369),  Expect = 1e-39, Method: Compositional matrix adjust.
 Identities = 129/475 (27%), Positives = 207/475 (44%), Gaps = 80/475 (17%)

Query  10   LAKRCYHGKNVINPYTGQVMYQPCGECPACLTRKASIRSMRVSLQKSLSKYTYFINPSYD  69
            L  RC H + V+N YT + +   CG CP+C+ R++S+++  ++   +  +Y YF+  +Y 
Sbjct  10   LVTRCQHPRTVVNKYTHEPVVVSCGHCPSCILRRSSVQTNLLTTYSAQFRYVYFVTLTYA  69

Query  70   QKYVPKCQIFKVH-------------------PDDPDSTLYELVVKPRRRGDykmvqkvy  110
              ++P  ++  V                      DP++ L+     PR            
Sbjct  70   PSFLPTLEVSVVETCTDDIADVSCVPNIDELDASDPNTYLFGFRSVPR------SSSVKL  123

Query  111  skkykkvikkEVDAPLSYTDDFSYYFNASEEYIRDFREQATLNVNGKYPH-LQDYYGYIS  169
                 +   K+ D   SY                  + +  L++ GK  H + +   YI 
Sbjct  124  KSSTVERTFKDPDVKFSYP----------------MKPKELLSILGKINHNVPNRIPYIC  167

Query  170  RKDGQLFVKRLRKHIFKFAGKYEKVHIYLVSEYGPVHFRPHFHILLFTDSDRVAKNIGRI  229
             +D  LF+KRLR +        EK+  Y VSEYGP  FRPH+H+LLF++S+R ++ +   
Sbjct  168  NRDLDLFLKRLRSYYLD-----EKLRYYAVSEYGPTSFRPHWHLLLFSNSERFSRTVCEN  222

Query  230  VNSSWKFGRCDWSASRGDAESYVAGYVNSFSRLP-YHLKQDDRVKPYSRFSNGFATSCFF  288
            V+ +W +GRCD S SRG A  YVA YVNSF  LP ++ +    V+P S  S GF  S  F
Sbjct  223  VSKAWSYGRCDASLSRGFAAPYVASYVNSFVALPDFYTQMPKVVRPKSFHSIGFTESNLF  282

Query  289  DAKEAVRDSISRPIEETPLSPFLNGVPSLINGKLLAIRPPRSVVDSCFLRYACNGRLSSH  348
              K  V +     ++E      LNGV    +G    I+P    +   F R++   R S  
Sbjct  283  PRKVRVAE-----VDEI-TDKCLNGVRVERDGYFRTIKPTWPYLLRLFPRFSDAIRKSPS  336

Query  349  ELYWLVRSVSTTLSRSFQTVRRD--------NPDATLMDVCRLHLRSIYSMS-SRSVEDF  399
             +Y L+ +  T   R  ++   D        +   +++  C+ +L  + +   S    +F
Sbjct  337  SIYQLLFAAFTAPERVIRSGCADIGCDPFGESSKQSILSFCKQYLNYVDNYGKSNEHRNF  396

Query  400  LSIENQ--------LYTCYYYARLESPTTDVRSDDLFDSDCMRLYRLFSCVGKFI  446
            LS +          L  C  Y  ++  TT   S         R+YR F  + KFI
Sbjct  397  LSPQASLPHSDVLILSECRLYDGVDLETTHRVS---------RVYRFFLGISKFI  442


> Alpavirinae_Human_feces_A_021_Microviridae_AG075_putative.VP4
Length=547

 Score =   144 bits (363),  Expect = 6e-39, Method: Compositional matrix adjust.
 Identities = 150/578 (26%), Positives = 245/578 (42%), Gaps = 68/578 (12%)

Query  8    KYLAKR------CYHGKNVINPYTGQVMYQPCGECPACLTRKASIRSMRVSLQKSLSKYT  61
            +YL+ R      C   + +   ++  V+   C EC  CL +K+   ++ V++     KY 
Sbjct  4    QYLSSRFAPMSDCNQPRYLRQLHSDDVLSIGCNECLPCLLKKSRNDTLDVTISTQTFKYI  63

Query  62   YFINPSYDQKYVPKCQIFKVHPDDPDSTLY--ELVVKP-------RRRGDykmvqkvysk  112
            +F+N  Y   ++P  +    H   P+  +   E +V+P       +RR D  +V   +S 
Sbjct  64   FFVNLDYATPFIPIMR----HEYIPERKVIYCESMVRPSVKIPTNKRRKDGSVVFTTFSF  119

Query  113  kykkvikkEVDAPLSYTDDFSYYFNASEEYIRDFREQATLNVNGKYPHLQDYYGYISRKD  172
            +       +   P  +T         SEE  R F  +  L  NGKYP  +D + Y+SR D
Sbjct  120  RAA-----DETRPFCFTAPCE-----SEEEYRLFVRKVNLTANGKYPMYKDCFPYLSRYD  169

Query  173  GQLFVKRLRKHIFKFAGKYEKVHIYLVSEYGPVHFRPHFHILLFTDSDRVAKNIGRIVNS  232
              LF+KRLR    K  G+   +H Y+V EYGPVHFRPH+HI++ ++  R A+++   V+ 
Sbjct  170  VALFMKRLRNLFLKKYGQSIYMHSYIVGEYGPVHFRPHYHIIISSNDPRFAESLEHFVDK  229

Query  233  SWKFGRCDWSASRGDAESYVAGYVNSFSRLPYHLKQDDRVKPYSRFSNGFATSCFFDAKE  292
            +W FG        G+  SYVA YVNS   LP   ++   V+P+SR   GF    F     
Sbjct  230  AWFFGGASAEIPDGNCASYVASYVNSSVSLPVLFRKHRLVRPFSRKCRGFLMERFAPDSL  289

Query  293  AVRDSISRPIEETPLSPFLNGVPSLINGKLLAIRPPRSVVDSCFLRYACNGRLSSHELYW  352
               +   R I         NG    I      + P RS  D  + R    GR    +L  
Sbjct  290  PFGERTDRDI---------NGTLCSIGDASFQLYPRRSYRDRVYPRLFKVGRFDLDQLL-  339

Query  353  LVRSVSTTLSRSFQTVRRDNPDATLMDVCRLHLRSIYSMSSRSVEDFLSIENQLYTCYYY  412
               +VS  ++R F+T+ +     T  ++ R  LR +      + E        L    Y+
Sbjct  340  ---TVSRIITRIFRTICKQGRQRTAAELARSILRYVQFGRDPNTE-------VLRQFIYF  389

Query  413  ARLESPTTDVRSDD--LFDSDCMRLYRLFSCVGKFISFWDITPSSSYEYIYRTVDLS---  467
               + P    R+    LF+    R YR+       + FW       + +  R ++L+   
Sbjct  390  NETDIPLARSRATRQMLFN----RSYRIAYNYCSLVRFWTSCDICGFGFD-REIELAIRN  444

Query  468  -KWYYSRLSYHMLRSQYTdlvglvdldeelvdFLIAPVTEDTPSSNGVSALEHHP-----  521
               YYS   Y  L +QY D++  +D +    +     +  D      V + +H       
Sbjct  445  VNRYYSETEYRYLVNQYEDILRFIDSEFYRGEVDDLLMYYDRSPGRFVVSKQHRKVSMSD  504

Query  522  --PFESLVKSHPILSLAQAKAKTDCDNRVKHREINERN  557
              P  S +K++ ++     +      N +KH+E+N+ N
Sbjct  505  TFPV-STIKTNRLVQAVDEECHCRIQNSIKHKELNDLN  541


> Alpavirinae_Human_gut_33_017_Microviridae_AG0152_putative.VP4
Length=565

 Score =   138 bits (347),  Expect = 8e-37, Method: Compositional matrix adjust.
 Identities = 132/476 (28%), Positives = 209/476 (44%), Gaps = 82/476 (17%)

Query  10   LAKRCYHGKNVINPYTGQVMYQPCGECPACLTRKASIRSMRVSLQKSLSKYTYFINPSYD  69
            L  RC + + V+N YT + +   CG CP+C+ R++ I++  ++   +  +Y YF+  +Y 
Sbjct  10   LVTRCQNPRTVVNKYTHEPVVVSCGACPSCVLRRSGIQTNLLTTYSAQFRYVYFVTLTYA  69

Query  70   QKYVPKCQIFKVH-------------------PDDPDSTLYELVVKPRRRGDykmvqkvy  110
              ++P  ++  +                    P D +  L+     PR       V+   
Sbjct  70   PCFLPTLEVSVIETCTDDIADVSSVPDINDLDPCDNNRYLFGFCSVPR----SASVKLKN  125

Query  111  skkykkvikkEVDAPLSYTDDFSYYFNASEEYIRDFREQATLNVNGKYPHLQDYYGYISR  170
            S   +     EV         FSY     E  +    ++   NV  + P       YI  
Sbjct  126  STVERTFKDPEVR--------FSYPMKPKE--LLSILDKINHNVPNRIP-------YICN  168

Query  171  KDGQLFVKRLRKHIFKFAGKYEKVHIYLVSEYGPVHFRPHFHILLFTDSDRVAKNIGRIV  230
            +D  LF+KRLR +       YEK+  Y VSEYGP  +RPH+H+LLF++S++ +K I   V
Sbjct  169  RDLDLFLKRLRSYY-----PYEKLRYYAVSEYGPTSYRPHWHLLLFSNSEQFSKTILENV  223

Query  231  NSSWKFGRCDWSASRGDAESYVAGYVNSFSRLP-YHLKQDDRVKPYSRFSNGFATSCFFD  289
            + +W +GRCD S SRG A  YVA YVNSF  LP ++ +    ++P S  S GF  S  F 
Sbjct  224  SKAWSYGRCDASLSRGFAAPYVASYVNSFVALPSFYTEMPRFLRPKSFHSIGFTESNLFP  283

Query  290  AKEAVRDSISRPIEETPLSPFLNGVPSLINGKLLAIRPPRSVVDSCFLRYACNGRLSSHE  349
             K  + +     I+E      LNGV    +G    ++P    +   F R++   R S   
Sbjct  284  RKVRISE-----IDEV-TDKCLNGVRVERDGYFRILKPSWPYLLRLFPRFSDAIRKSPSS  337

Query  350  LYWLVRSVSTTLSRSFQTVRRD--------NPDATLMDVCRLHLRSIYSMS-SRSVEDFL  400
            +Y L+ +  T  +R  ++   D        N   +L+  C+ +L  + +   S   ++FL
Sbjct  338  IYQLLFAAFTAPARVIRSGCADIGCDPFVENSKQSLLSFCKQYLNYVDNHGKSNEFKNFL  397

Query  401  SIENQLYTCYYYARLESPTTDV------RSDDLFDSDCM----RLYRLFSCVGKFI  446
            S    L           P +DV      R  D  D +      R+YR F  + KFI
Sbjct  398  SPHADL-----------PHSDVLILTECRLYDGVDLEAAHRLSRVYRFFLGIAKFI  442



Lambda      K        H        a         alpha
   0.322    0.137    0.422    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 51467408